Definition | Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence. |
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Accession | NC_008378 |
Length | 870,021 |
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The map label for this gene is eryA [H]
Identifier: 116248874
GI number: 116248874
Start: 213245
End: 214846
Strand: Direct
Name: eryA [H]
Synonym: pRL120204
Alternate gene names: 116248874
Gene position: 213245-214846 (Clockwise)
Preceding gene: 116248866
Following gene: 116248875
Centisome position: 24.51
GC content: 64.67
Gene sequence:
>1602_bases TTGCTAGGATGGCGAGATAGGCCTGCAATGACATCGACCCAGAAGATCATCATTGGCATAGATGCCGGCACCTCGGTCAT CAAGGCTGTCGCCTTCGATCTGTCCGGGCGCCAGATTGCTACGGCCTCCGTTCGAAACCGATATGCCACAGGAGACGATG GTTCGGCAACGCAGTCGCTGGATCAGACCTGGCTCGATTGCGCCAGCGCGTTGCGTGGTCTCGGCGAAAAAGTCCCTGAT CTTGCGTCACGCACCGCAGCCATCGCCGTCACCGGACAGGGCGACGGCACCTGGCTCGTCGGCCGAGCCAATAGGCCGGT TGCCGATGCCTGGCTGTGGCTCGACGCGCGCGCCGCGCCGACGGTGACGTCGCTCGCGGGCGGAACGCAGAATCGTGCCC GCTTCGAGACGACGGGCACCGGCCTCAACACTTGCCAGCAGGGTGCGCAACTCGCCCATATGGACCGCTTCACGCCGGAC CTTCTCGATCGGGCGGAGACGGCGCTGCACTGCAAGGACTGGCTCTATCTCAACCTCACAGGCGTGCGGGCAACCGATCC ATCGGAGGCGAGTTTCACCTTTGGCAATTTCAGAACACGCCAGTATGATGCCGTGGTGATCGACGCGCTCGGCCTTGAGC ACAGACGCGGGCTCCTGCCCGAAATCATCGACGGCAGCGAGATCAGCCACCCGCTGACATCGGAGGCGGCTAAGGCCTGC GGTCTTCTTGCCGGAACGCCGGTCTGCCTCGGCTATGTCGACATGGTGATGACGGCGCTTGGTGCAGGCGTGCGCAGCGG CGCTCGCAACGCCGCCTGCTCGACGATCGGCTCGACCGGGGTGCACTTGCGCGCCAAGGCCGTTGCCGACGTTCAGCTCA ATCGCGAGGGCACCGGCTATGTGATCGCCCTGCCCATTCCCGGCATCGTCACCCAGGTCCAGACCAATATGGGCGCCACG ATCAACATCGACTGGATCCTTAATGTCGCCGCCTATCTGATGGCCGAGGCAGGCAAGCCTGCTTCGCACGCAGACCTCAT TGCACGCATCGACGGCTGGTTTGCAGAAAGCCGACCGGGGTCGGTGCTTTACCATCCCTACATTTCCGAAGCGGGCGAAC GTGGGCCTTTCGTCAACGCCAATGCGCGCGCGGGCTTCACCGGGCTTTCGATGCGTCACGGTTTCCCCGACCTGCTGCGC AGCGTGATCGAAGGGTTGGGGCTTGCGACCCGCGACTGCTACGCGGCGATGGGCGCGATGCCAGAGGAGCTGCGGGTCAC CGGCGGCGCAACACGCTCCGTCGCCCTTCGCCGTTCACTTTCGGCCGCCGTCAACGCACCGATCCGCCAGTCGCGCCGCG AGGAGACGGGGGCGGCCGGCGTGGCGATGATGGCTGCGGTGGCTGTCGGCATCTATTCGAGCATGGACGATTGCATTGCC GACTGGGTGACGCCGCTGCTCGGAGATCCGGAAACACCGGATGCCAGCGAGGCCCACCGGTTCGACCGGCTTTTTTCTGC TTATACCGATGTACGCCAGGCAATGACGCCCGCCTGGGACAAGCTTGCCGTAGCCGCAACGACGTCGCCGCTGGGCGCGT AA
Upstream 100 bases:
>100_bases ATTAAAAACCGAAGTTGGCAGCCGGATGCATCATCCCAGAGAGTTTAGGGATCGGGAGGACTTCAGATGGATTTGATGCG CGTATTGCCCGCCGCGACGC
Downstream 100 bases:
>100_bases TTCTGATGCAGCAGGCATCGAAGGAGCATGACATGACCGAACCCGAACTCCTGGATCTCTTCGTCATCGGCGGAGGCATC AACGGCGCGGGGATAGCACG
Product: putative eryithritol kinase
Products: NA
Alternate protein names: Xylulokinase [H]
Number of amino acids: Translated: 533; Mature: 533
Protein sequence:
>533_residues MLGWRDRPAMTSTQKIIIGIDAGTSVIKAVAFDLSGRQIATASVRNRYATGDDGSATQSLDQTWLDCASALRGLGEKVPD LASRTAAIAVTGQGDGTWLVGRANRPVADAWLWLDARAAPTVTSLAGGTQNRARFETTGTGLNTCQQGAQLAHMDRFTPD LLDRAETALHCKDWLYLNLTGVRATDPSEASFTFGNFRTRQYDAVVIDALGLEHRRGLLPEIIDGSEISHPLTSEAAKAC GLLAGTPVCLGYVDMVMTALGAGVRSGARNAACSTIGSTGVHLRAKAVADVQLNREGTGYVIALPIPGIVTQVQTNMGAT INIDWILNVAAYLMAEAGKPASHADLIARIDGWFAESRPGSVLYHPYISEAGERGPFVNANARAGFTGLSMRHGFPDLLR SVIEGLGLATRDCYAAMGAMPEELRVTGGATRSVALRRSLSAAVNAPIRQSRREETGAAGVAMMAAVAVGIYSSMDDCIA DWVTPLLGDPETPDASEAHRFDRLFSAYTDVRQAMTPAWDKLAVAATTSPLGA
Sequences:
>Translated_533_residues MLGWRDRPAMTSTQKIIIGIDAGTSVIKAVAFDLSGRQIATASVRNRYATGDDGSATQSLDQTWLDCASALRGLGEKVPD LASRTAAIAVTGQGDGTWLVGRANRPVADAWLWLDARAAPTVTSLAGGTQNRARFETTGTGLNTCQQGAQLAHMDRFTPD LLDRAETALHCKDWLYLNLTGVRATDPSEASFTFGNFRTRQYDAVVIDALGLEHRRGLLPEIIDGSEISHPLTSEAAKAC GLLAGTPVCLGYVDMVMTALGAGVRSGARNAACSTIGSTGVHLRAKAVADVQLNREGTGYVIALPIPGIVTQVQTNMGAT INIDWILNVAAYLMAEAGKPASHADLIARIDGWFAESRPGSVLYHPYISEAGERGPFVNANARAGFTGLSMRHGFPDLLR SVIEGLGLATRDCYAAMGAMPEELRVTGGATRSVALRRSLSAAVNAPIRQSRREETGAAGVAMMAAVAVGIYSSMDDCIA DWVTPLLGDPETPDASEAHRFDRLFSAYTDVRQAMTPAWDKLAVAATTSPLGA >Mature_533_residues MLGWRDRPAMTSTQKIIIGIDAGTSVIKAVAFDLSGRQIATASVRNRYATGDDGSATQSLDQTWLDCASALRGLGEKVPD LASRTAAIAVTGQGDGTWLVGRANRPVADAWLWLDARAAPTVTSLAGGTQNRARFETTGTGLNTCQQGAQLAHMDRFTPD LLDRAETALHCKDWLYLNLTGVRATDPSEASFTFGNFRTRQYDAVVIDALGLEHRRGLLPEIIDGSEISHPLTSEAAKAC GLLAGTPVCLGYVDMVMTALGAGVRSGARNAACSTIGSTGVHLRAKAVADVQLNREGTGYVIALPIPGIVTQVQTNMGAT INIDWILNVAAYLMAEAGKPASHADLIARIDGWFAESRPGSVLYHPYISEAGERGPFVNANARAGFTGLSMRHGFPDLLR SVIEGLGLATRDCYAAMGAMPEELRVTGGATRSVALRRSLSAAVNAPIRQSRREETGAAGVAMMAAVAVGIYSSMDDCIA DWVTPLLGDPETPDASEAHRFDRLFSAYTDVRQAMTPAWDKLAVAATTSPLGA
Specific function: Unknown
COG id: COG1070
COG function: function code G; Sugar (pentulose and hexulose) kinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FGGY kinase family [H]
Homologues:
Organism=Escherichia coli, GI1789987, Length=509, Percent_Identity=27.8978388998035, Blast_Score=118, Evalue=8e-28, Organism=Escherichia coli, GI1790005, Length=513, Percent_Identity=23.1968810916179, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1787789, Length=529, Percent_Identity=25.8979206049149, Blast_Score=103, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000577 - InterPro: IPR018485 - InterPro: IPR018483 - InterPro: IPR018484 - InterPro: IPR006000 [H]
Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]
EC number: =2.7.1.17 [H]
Molecular weight: Translated: 56348; Mature: 56348
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: PS00445 FGGY_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGWRDRPAMTSTQKIIIGIDAGTSVIKAVAFDLSGRQIATASVRNRYATGDDGSATQSL CCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCEEEEHHHHCCCCCCCCCCHHHHH DQTWLDCASALRGLGEKVPDLASRTAAIAVTGQGDGTWLVGRANRPVADAWLWLDARAAP HHHHHHHHHHHHHHHHHCHHHHCCCEEEEEEECCCCEEEEECCCCCHHHEEEEEECCCCC TVTSLAGGTQNRARFETTGTGLNTCQQGAQLAHMDRFTPDLLDRAETALHCKDWLYLNLT CHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHEECCEEEEEEE GVRATDPSEASFTFGNFRTRQYDAVVIDALGLEHRRGLLPEIIDGSEISHPLTSEAAKAC ECCCCCCCCCCEEECCCCCCEECEEEEEHHCCHHHCCCCCHHCCCCCCCCCHHHHHHHHH GLLAGTPVCLGYVDMVMTALGAGVRSGARNAACSTIGSTGVHLRAKAVADVQLNREGTGY HHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEEEEEEEEEECCCCCCE VIALPIPGIVTQVQTNMGATINIDWILNVAAYLMAEAGKPASHADLIARIDGWFAESRPG EEEECCCCHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHCCCCCC SVLYHPYISEAGERGPFVNANARAGFTGLSMRHGFPDLLRSVIEGLGLATRDCYAAMGAM CEEECCHHHCCCCCCCEECCCCCCCCCCCHHHCCCHHHHHHHHHHCCCCHHHHHHHHCCC PEELRVTGGATRSVALRRSLSAAVNAPIRQSRREETGAAGVAMMAAVAVGIYSSMDDCIA CHHHEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH DWVTPLLGDPETPDASEAHRFDRLFSAYTDVRQAMTPAWDKLAVAATTSPLGA HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEECCCCCCC >Mature Secondary Structure MLGWRDRPAMTSTQKIIIGIDAGTSVIKAVAFDLSGRQIATASVRNRYATGDDGSATQSL CCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCEEEEHHHHCCCCCCCCCCHHHHH DQTWLDCASALRGLGEKVPDLASRTAAIAVTGQGDGTWLVGRANRPVADAWLWLDARAAP HHHHHHHHHHHHHHHHHCHHHHCCCEEEEEEECCCCEEEEECCCCCHHHEEEEEECCCCC TVTSLAGGTQNRARFETTGTGLNTCQQGAQLAHMDRFTPDLLDRAETALHCKDWLYLNLT CHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHEECCEEEEEEE GVRATDPSEASFTFGNFRTRQYDAVVIDALGLEHRRGLLPEIIDGSEISHPLTSEAAKAC ECCCCCCCCCCEEECCCCCCEECEEEEEHHCCHHHCCCCCHHCCCCCCCCCHHHHHHHHH GLLAGTPVCLGYVDMVMTALGAGVRSGARNAACSTIGSTGVHLRAKAVADVQLNREGTGY HHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEEEEEEEEEECCCCCCE VIALPIPGIVTQVQTNMGATINIDWILNVAAYLMAEAGKPASHADLIARIDGWFAESRPG EEEECCCCHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHCCCCCC SVLYHPYISEAGERGPFVNANARAGFTGLSMRHGFPDLLRSVIEGLGLATRDCYAAMGAM CEEECCHHHCCCCCCCEECCCCCCCCCCCHHHCCCHHHHHHHHHHCCCCHHHHHHHHCCC PEELRVTGGATRSVALRRSLSAAVNAPIRQSRREETGAAGVAMMAAVAVGIYSSMDDCIA CHHHEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH DWVTPLLGDPETPDASEAHRFDRLFSAYTDVRQAMTPAWDKLAVAATTSPLGA HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 6320721; 8041620; 9278503 [H]