Definition Borrelia burgdorferi B31 plasmid cp32-6, complete sequence.
Accession NC_000951
Length 29,838

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 11497234

GI number: 11497234

Start: 8978

End: 10252

Strand: Direct

Name: Not Available

Synonym: BB_M15

Alternate gene names: NA

Gene position: 8978-10252 (Clockwise)

Preceding gene: 11497233

Following gene: 11497235

Centisome position: 30.09

GC content: 35.61

Gene sequence:

>1275_bases
GTGAGCGACAAATTCACCATTAAATTTAAAGGGATTCTTGATCATGCTGCAACAAAAAAGGCCATTGAACAAGATATTTC
TAAAATGGAAAAATATCTTAAACCCAGAAACTCCAGTTTGGGAAGCACTAAAGATATTGTAAAAAATAATTTGTCGAACA
AGAAAAAAGAACTTAGCAAACAATCTAAATTTGAAAGCTTAAGAGAGCGTGTTGAGAAATATAGACTTACACAAACTAAA
AAGCTTATAAAACAGGGCATGGGGTTTGAGAAAGCCAGAAAAGAGGCTTTCAGAAGATCTTTAATGTCTGATAAAGACAA
AAGACGCCTTGAGTATAAAGAACTTGCAAAAGAATCAAAAGCAAAAAGTAAAATGTTAGCGGCCTCTCAAGGAAAAGGAC
TTGTTGCCAAAATTGCAATAGGCAGTGCCCTAGGTAATATCATTAGCAACGCTATGAGTAAAGTTGGGGGCGGCCTTTTG
GGTTTTGCTAAAAAAGCGGTTGAAGAAGACACCAAAACTAAAAGAACACAACTTCTCAATAAAGCGTTTTATGATGATCC
AAAAGAGAAAGAGGGTCTTTTAAAGATTATTGGCGGAATGAAGGGATTTGAGCGCGACTTAGAAAAAGAAGAATTCTTAA
ATCAAGCAAGTGTCTTTAAGGGGACTTTAAGGGATTTAGATATGTTAAATGAAACTAATTTGAAAAACGCAGTAGAATTT
GCAGCTATGCTTAAATCCAGTGGTGCTATGAGCAGCGAAGATGCAGTAAAGGCTGTTAATAGTGTTCTTGGGGGTGATGG
AAGTGAGCTTTTTGATCTATTAAAGAAGTCAGGTGTTGGAGACAAATATATAGAAGATGCCAAAATGGCCTGGCAAAGCG
GGGCACAAGTAGATCTAGAGTCTAGAATTACCAAGATGATGGAAATGTTCGAGGATTTTAAATCTTTCGGCCTTACAAAA
AAAGTCAATAATGCTGAGAGTATTCAAAGTAATTTGGCCTCAGCTGAGCAAACTCTTCAAAACTTAACCACTACTGTCTT
GGACCCATTACTTGACCTCATTAATAAGATAACTAATTACTTTAAAGACTTTGCGTTTGAAACACACATTATTAATCCCA
TAATTAATGGCATTAAAAGTATTTTTAATCTTAATTATTTCTTTGCAAAATTAAAATCGATGCTACCTGGATGGATGGGC
GGAGATGAGGGTGCGGCTCTAAAAAAACTACAAGAAGAAATTCAAAATCAAGACAATGCTAACAGCACACCATAA

Upstream 100 bases:

>100_bases
AAGAAATTGCCTTATGACGAGCTTTTAGAGGTCAATAGACTTGCTGAGATTAAATTAGAAAAAGAATTGTATGAATTAAT
TTTAAGCAAGTGAGGGCTTA

Downstream 100 bases:

>100_bases
TTTTTACAAAAGGTAATTACTTATGACAAGTAACAAAAAAATTGCTAACAATGCAGCTAACAAAATAGATATTAATAATA
AAATTACTAACAATCATGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 424; Mature: 423

Protein sequence:

>424_residues
MSDKFTIKFKGILDHAATKKAIEQDISKMEKYLKPRNSSLGSTKDIVKNNLSNKKKELSKQSKFESLRERVEKYRLTQTK
KLIKQGMGFEKARKEAFRRSLMSDKDKRRLEYKELAKESKAKSKMLAASQGKGLVAKIAIGSALGNIISNAMSKVGGGLL
GFAKKAVEEDTKTKRTQLLNKAFYDDPKEKEGLLKIIGGMKGFERDLEKEEFLNQASVFKGTLRDLDMLNETNLKNAVEF
AAMLKSSGAMSSEDAVKAVNSVLGGDGSELFDLLKKSGVGDKYIEDAKMAWQSGAQVDLESRITKMMEMFEDFKSFGLTK
KVNNAESIQSNLASAEQTLQNLTTTVLDPLLDLINKITNYFKDFAFETHIINPIINGIKSIFNLNYFFAKLKSMLPGWMG
GDEGAALKKLQEEIQNQDNANSTP

Sequences:

>Translated_424_residues
MSDKFTIKFKGILDHAATKKAIEQDISKMEKYLKPRNSSLGSTKDIVKNNLSNKKKELSKQSKFESLRERVEKYRLTQTK
KLIKQGMGFEKARKEAFRRSLMSDKDKRRLEYKELAKESKAKSKMLAASQGKGLVAKIAIGSALGNIISNAMSKVGGGLL
GFAKKAVEEDTKTKRTQLLNKAFYDDPKEKEGLLKIIGGMKGFERDLEKEEFLNQASVFKGTLRDLDMLNETNLKNAVEF
AAMLKSSGAMSSEDAVKAVNSVLGGDGSELFDLLKKSGVGDKYIEDAKMAWQSGAQVDLESRITKMMEMFEDFKSFGLTK
KVNNAESIQSNLASAEQTLQNLTTTVLDPLLDLINKITNYFKDFAFETHIINPIINGIKSIFNLNYFFAKLKSMLPGWMG
GDEGAALKKLQEEIQNQDNANSTP
>Mature_423_residues
SDKFTIKFKGILDHAATKKAIEQDISKMEKYLKPRNSSLGSTKDIVKNNLSNKKKELSKQSKFESLRERVEKYRLTQTKK
LIKQGMGFEKARKEAFRRSLMSDKDKRRLEYKELAKESKAKSKMLAASQGKGLVAKIAIGSALGNIISNAMSKVGGGLLG
FAKKAVEEDTKTKRTQLLNKAFYDDPKEKEGLLKIIGGMKGFERDLEKEEFLNQASVFKGTLRDLDMLNETNLKNAVEFA
AMLKSSGAMSSEDAVKAVNSVLGGDGSELFDLLKKSGVGDKYIEDAKMAWQSGAQVDLESRITKMMEMFEDFKSFGLTKK
VNNAESIQSNLASAEQTLQNLTTTVLDPLLDLINKITNYFKDFAFETHIINPIINGIKSIFNLNYFFAKLKSMLPGWMGG
DEGAALKKLQEEIQNQDNANSTP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47304; Mature: 47173

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCC
>Mature Secondary Structure 
SDKFTIKFKGILDHAATKKAIEQDISKMEKYLKPRNSSLGSTKDIVKNNLSNKKKELSK
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH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CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA