Definition | Borrelia burgdorferi B31 plasmid cp32-6, complete sequence. |
---|---|
Accession | NC_000951 |
Length | 29,838 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 11497225
GI number: 11497225
Start: 66
End: 1289
Strand: Direct
Name: Not Available
Synonym: BB_M01
Alternate gene names: NA
Gene position: 66-1289 (Clockwise)
Preceding gene: NA
Following gene: 11497226
Centisome position: 0.22
GC content: 30.8
Gene sequence:
>1224_bases GTGTGTGATTTAAGAAAAACAAAACTAATAGATAAAATAAGTTCACTAGAACTATACAAATACTCAATATTTTTTAGAAA TTACATTGAAAATGTAGCAGAAGATTGTCTCAAGAACGGACTTATTCTTGAGAGTGCTGCTCACAATGTTAGTGAGGTTG AACTTGCTAGGTTAAAGGTACAGCTTAAGAATGCTCTGCTTAATTGTATTATAAGCTACCGTTTTCATGGGATTGGCTAT GTTTTAGTAAAAACCAAAGATACCCTAATAGATCTCGAACAACCCGTTAATATAGAATTACCTATTGGTTTTGAATACCT TGATTATGAATATGTAAGAGATTTGGGAGTTGATTTTGATCATATAACCTATAAAGTAAAATCCAACAATAAGAACAATT CTTTAGACGCAGTTAAAATACATAAAAGTCGACTTATCATATATGAAAACTTTGATTATATCTTAAAAAGATATGTTCCG TGTTATACCGAAAGCTTTTTACTAGATATTTATTTATTTGAAAAGATATACGTAGAAATAGAAAGACGTATTGAAAACCA CAATTTTTTGTTTTACAAAGATGAATCTTTAGTACAACTACAAGACGCACTTTCTAGTGCAACAACTTCTTTAAGTGCAC TTACTCAGAGCAATAATGATAGGGGAAGTGGCATTTTATCTTCTTTTTTGAGAAAACAAAATTCAAACAATCATAGTAAA GATATTTCTAATTTAAGAAACCTTAATGACTCATTATCACAGGAGCTTGCTAGGCTAAAAAGCAATCTAAATAATGAGGG AATGTTTTATACGGCCACCCCTAGTGCTAGTTTAGAGGTTATTAAATACGATCTTAGCTACTTAAAGGAGGCTTTAGCAT TAATTAAGGCAAAAATTGGTGCAGATACTAAAGAGCCCTTAACCAGAAGTTTTAATGAGCAGGCTAAAGGGCTAGGAAAT GATGGTAAAGGTGATAGGAGTAATTATTACGATTTTCTCAAAGGTGTACAAGAACAAGTTGAGAACTCTTGTAATTTAAA ACTTACAAAGTATTTTGGGCTTGATATGAAGTTTAATTCGCTGATTATGTTAAGTGAAGAACAAAAAGTAGAGAGAGATA TAAAGCTAATTGAGCTTTACAGTAAATATAACCAGCTTATACAAAGTAGCTCATTTAATAATGAGGAGCTAGCGATGTTA AAAGAGAAATTATTCTCATTTTGA
Upstream 100 bases:
>100_bases GAAGTGTTCACTTTGGCAATCAAAGATTTTTGTAAATTTTATTGACAAAAATATTAGTTTTTGCTATCATACATCTAATT TAATAAAGAGAAGTAAAAAG
Downstream 100 bases:
>100_bases GAAAAGGAGTTAAAAGATGACTGAGAAAGAAGAAAAAGAAGACCTGCAAGCACAAGATAAAGAAGAGCAGCAAATTAAGG CTGATACTAAAGTTATCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 407; Mature: 407
Protein sequence:
>407_residues MCDLRKTKLIDKISSLELYKYSIFFRNYIENVAEDCLKNGLILESAAHNVSEVELARLKVQLKNALLNCIISYRFHGIGY VLVKTKDTLIDLEQPVNIELPIGFEYLDYEYVRDLGVDFDHITYKVKSNNKNNSLDAVKIHKSRLIIYENFDYILKRYVP CYTESFLLDIYLFEKIYVEIERRIENHNFLFYKDESLVQLQDALSSATTSLSALTQSNNDRGSGILSSFLRKQNSNNHSK DISNLRNLNDSLSQELARLKSNLNNEGMFYTATPSASLEVIKYDLSYLKEALALIKAKIGADTKEPLTRSFNEQAKGLGN DGKGDRSNYYDFLKGVQEQVENSCNLKLTKYFGLDMKFNSLIMLSEEQKVERDIKLIELYSKYNQLIQSSSFNNEELAML KEKLFSF
Sequences:
>Translated_407_residues MCDLRKTKLIDKISSLELYKYSIFFRNYIENVAEDCLKNGLILESAAHNVSEVELARLKVQLKNALLNCIISYRFHGIGY VLVKTKDTLIDLEQPVNIELPIGFEYLDYEYVRDLGVDFDHITYKVKSNNKNNSLDAVKIHKSRLIIYENFDYILKRYVP CYTESFLLDIYLFEKIYVEIERRIENHNFLFYKDESLVQLQDALSSATTSLSALTQSNNDRGSGILSSFLRKQNSNNHSK DISNLRNLNDSLSQELARLKSNLNNEGMFYTATPSASLEVIKYDLSYLKEALALIKAKIGADTKEPLTRSFNEQAKGLGN DGKGDRSNYYDFLKGVQEQVENSCNLKLTKYFGLDMKFNSLIMLSEEQKVERDIKLIELYSKYNQLIQSSSFNNEELAML KEKLFSF >Mature_407_residues MCDLRKTKLIDKISSLELYKYSIFFRNYIENVAEDCLKNGLILESAAHNVSEVELARLKVQLKNALLNCIISYRFHGIGY VLVKTKDTLIDLEQPVNIELPIGFEYLDYEYVRDLGVDFDHITYKVKSNNKNNSLDAVKIHKSRLIIYENFDYILKRYVP CYTESFLLDIYLFEKIYVEIERRIENHNFLFYKDESLVQLQDALSSATTSLSALTQSNNDRGSGILSSFLRKQNSNNHSK DISNLRNLNDSLSQELARLKSNLNNEGMFYTATPSASLEVIKYDLSYLKEALALIKAKIGADTKEPLTRSFNEQAKGLGN DGKGDRSNYYDFLKGVQEQVENSCNLKLTKYFGLDMKFNSLIMLSEEQKVERDIKLIELYSKYNQLIQSSSFNNEELAML KEKLFSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47038; Mature: 47038
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCDLRKTKLIDKISSLELYKYSIFFRNYIENVAEDCLKNGLILESAAHNVSEVELARLKV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHCCHHHHHHHHHHH QLKNALLNCIISYRFHGIGYVLVKTKDTLIDLEQPVNIELPIGFEYLDYEYVRDLGVDFD HHHHHHHHHHHHHHHCCEEEEEEECCCCEEECCCCCEEEECCCCHHHHHHHHHHHCCCHH HITYKVKSNNKNNSLDAVKIHKSRLIIYENFDYILKRYVPCYTESFLLDIYLFEKIYVEI HEEEEEECCCCCCCCCEEEEECCEEEEEECHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH ERRIENHNFLFYKDESLVQLQDALSSATTSLSALTQSNNDRGSGILSSFLRKQNSNNHSK HHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHH DISNLRNLNDSLSQELARLKSNLNNEGMFYTATPSASLEVIKYDLSYLKEALALIKAKIG HHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHC ADTKEPLTRSFNEQAKGLGNDGKGDRSNYYDFLKGVQEQVENSCNLKLTKYFGLDMKFNS CCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEECC LIMLSEEQKVERDIKLIELYSKYNQLIQSSSFNNEELAMLKEKLFSF EEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MCDLRKTKLIDKISSLELYKYSIFFRNYIENVAEDCLKNGLILESAAHNVSEVELARLKV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHCCHHHHHHHHHHH QLKNALLNCIISYRFHGIGYVLVKTKDTLIDLEQPVNIELPIGFEYLDYEYVRDLGVDFD HHHHHHHHHHHHHHHCCEEEEEEECCCCEEECCCCCEEEECCCCHHHHHHHHHHHCCCHH HITYKVKSNNKNNSLDAVKIHKSRLIIYENFDYILKRYVPCYTESFLLDIYLFEKIYVEI HEEEEEECCCCCCCCCEEEEECCEEEEEECHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH ERRIENHNFLFYKDESLVQLQDALSSATTSLSALTQSNNDRGSGILSSFLRKQNSNNHSK HHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHH DISNLRNLNDSLSQELARLKSNLNNEGMFYTATPSASLEVIKYDLSYLKEALALIKAKIG HHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHC ADTKEPLTRSFNEQAKGLGNDGKGDRSNYYDFLKGVQEQVENSCNLKLTKYFGLDMKFNS CCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEECC LIMLSEEQKVERDIKLIELYSKYNQLIQSSSFNNEELAMLKEKLFSF EEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA