Definition | Borrelia burgdorferi B31 plasmid cp32-6, complete sequence. |
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Accession | NC_000951 |
Length | 29,838 |
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Identifier: 11497207
GI number: 11497207
Start: 20721
End: 21470
Strand: Direct
Name: Not Available
Synonym: BB_M32
Alternate gene names: 11497207
Gene position: 20721-21470 (Clockwise)
Preceding gene: 11497206
Following gene: 11497208
Centisome position: 69.45
GC content: 24.67
Gene sequence:
>750_bases ATGGATAATAAAAAACCTAAAATAATAACAATAGCGTCAATCAAGGGCGGTGTTGGTAAAAGCACAAGTGCAATTATATT TGCAACCTTATTGGCTCAAAAATATAAGGTATTATTAATAGATATAGATACTCAAGCATCCACCACTAGTTATTATTATG ATGATATACAAAAATCCAGTATAGATTTAAGAAAAAATAATATATATGAAGTTTTAATAGAAAAATTAGATATTAATCGA TCAATCGTTAATGTAGCGAATAATTTAGATTTAATACCTAGTTATTTGACTTTACATAGTATAAATGCTTTTGGTTATAA GCACACTTTTGATGAATTTAGATTAAAAAAAGAGCTTAAACATATAGATGTTGGATATAATTTTATTATAATTGATACTC CCCCAAGTTTGGATTTTACTTTAACTAATGCTTTAGTTTGTTGTAACAATGTAATTGTCCCCTTGACAGCAGAAAAATGG ACAATTGAAAGTTTTGACCTTTTGAAATTTTTTATGGAAAAAATAGGTGTAGAATTGCCTACTTATTTTATAATAACGAG ATTTAAAAAAAATAATACACATAAGCAATTGTTGGAAATGCTGAACTCCAAAGAAAATTTTTTAGGAATGATATCAGAAA GAGAAGATTTAAATAGAAGAATTGCTAGTAATTCTTCTTTTGATTTTCAAATGGATTATATAAAAGAGTATAAAAATTCA TTAATGAATTTTTATGCAAAATTAAAATAA
Upstream 100 bases:
>100_bases ATCATTACAACAAAGTTTTATTTAGTATGTTTACGGATTTAGAACAACAAGTGTATAAATTTTATGGGAAAAAATACCCG GAACAAGGACCGTTAATAAA
Downstream 100 bases:
>100_bases TTATAATTATAAGTTCGACGCGTTGAACTTATAATTAAGGAGGCTTGTTATGAAAAATAATACAAAATTAATAATCAATA AAAGGGATATTGATTCTGAG
Product: plasmid partition protein, putative
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MDNKKPKIITIASIKGGVGKSTSAIIFATLLAQKYKVLLIDIDTQASTTSYYYDDIQKSSIDLRKNNIYEVLIEKLDINR SIVNVANNLDLIPSYLTLHSINAFGYKHTFDEFRLKKELKHIDVGYNFIIIDTPPSLDFTLTNALVCCNNVIVPLTAEKW TIESFDLLKFFMEKIGVELPTYFIITRFKKNNTHKQLLEMLNSKENFLGMISEREDLNRRIASNSSFDFQMDYIKEYKNS LMNFYAKLK
Sequences:
>Translated_249_residues MDNKKPKIITIASIKGGVGKSTSAIIFATLLAQKYKVLLIDIDTQASTTSYYYDDIQKSSIDLRKNNIYEVLIEKLDINR SIVNVANNLDLIPSYLTLHSINAFGYKHTFDEFRLKKELKHIDVGYNFIIIDTPPSLDFTLTNALVCCNNVIVPLTAEKW TIESFDLLKFFMEKIGVELPTYFIITRFKKNNTHKQLLEMLNSKENFLGMISEREDLNRRIASNSSFDFQMDYIKEYKNS LMNFYAKLK >Mature_249_residues MDNKKPKIITIASIKGGVGKSTSAIIFATLLAQKYKVLLIDIDTQASTTSYYYDDIQKSSIDLRKNNIYEVLIEKLDINR SIVNVANNLDLIPSYLTLHSINAFGYKHTFDEFRLKKELKHIDVGYNFIIIDTPPSLDFTLTNALVCCNNVIVPLTAEKW TIESFDLLKFFMEKIGVELPTYFIITRFKKNNTHKQLLEMLNSKENFLGMISEREDLNRRIASNSSFDFQMDYIKEYKNS LMNFYAKLK
Specific function: Inhibits the initiation of sporulation, spo0J antagonizes this inhibition. Soj ultimately inhibits the activation (phosphorylation) of spo0A. It is not required for chromosome partitioning [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the parA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 28817; Mature: 28817
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNKKPKIITIASIKGGVGKSTSAIIFATLLAQKYKVLLIDIDTQASTTSYYYDDIQKSS CCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHCC IDLRKNNIYEVLIEKLDINRSIVNVANNLDLIPSYLTLHSINAFGYKHTFDEFRLKKELK CCCCCCHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH HIDVGYNFIIIDTPPSLDFTLTNALVCCNNVIVPLTAEKWTIESFDLLKFFMEKIGVELP EEECCEEEEEEECCCCCCCHHHHHHHHHCCEEEEECCCCEECCHHHHHHHHHHHHCCCCC TYFIITRFKKNNTHKQLLEMLNSKENFLGMISEREDLNRRIASNSSFDFQMDYIKEYKNS EEEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHH LMNFYAKLK HHHHHHHCC >Mature Secondary Structure MDNKKPKIITIASIKGGVGKSTSAIIFATLLAQKYKVLLIDIDTQASTTSYYYDDIQKSS CCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHCC IDLRKNNIYEVLIEKLDINRSIVNVANNLDLIPSYLTLHSINAFGYKHTFDEFRLKKELK CCCCCCHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH HIDVGYNFIIIDTPPSLDFTLTNALVCCNNVIVPLTAEKWTIESFDLLKFFMEKIGVELP EEECCEEEEEEECCCCCCCHHHHHHHHHCCEEEEECCCCEECCHHHHHHHHHHHHCCCCC TYFIITRFKKNNTHKQLLEMLNSKENFLGMISEREDLNRRIASNSSFDFQMDYIKEYKNS EEEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHH LMNFYAKLK HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]