Definition | Borrelia burgdorferi B31 plasmid cp32-6, complete sequence. |
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Accession | NC_000951 |
Length | 29,838 |
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Identifier: 11497197
GI number: 11497197
Start: 14343
End: 15155
Strand: Direct
Name: Not Available
Synonym: BB_M22
Alternate gene names: NA
Gene position: 14343-15155 (Clockwise)
Preceding gene: 11497196
Following gene: 11497198
Centisome position: 48.07
GC content: 31.49
Gene sequence:
>813_bases ATGGCTGATGATCAAGAAAAATTACTAATTGATGAAGAAGAAACGGTTCAAATAAAAGATTTAAATAAGGTTACGACCGT TAACGATACTGATCTTTTACTGCTTGATGATGGAGCTGCAAGCAGTAATGCTATCACCTTTAAAAACTTTTTAGATGCTT CTAAAGACAAAATATTTAAAGGAGAAGGATTAGACTATTTTAAGCAGATAATTAAGTCTACAATTGCCGAAGAACTTGCA GCTGATAAAGATTTTGTAGAAAAAATTTATGCTAAAATAACGGACAAATTAATTAACAACGATTCTACTAATATTTCTAA CCTTTTTAGTAAAATTAAATCACGCCTTACAGATAGCATATCATCAGCCACTTTATCTAGAAGTGATGATCTTTTGATAA TGCCTTCATCAGATACTATTCAAAAAACACCCGTTCCTAAACATATACTTGGAGTACCATCAAATTTTGCTTATGGCAGA ACTAGAAGTACTACACTTTATCCTTCTGACTATGAGAATAACGCGATATCTATTAATATGGAATACAATGATGATGTAAC TCTTATTTTTTCTAAAAGTTACGATAATTCTCCCGTTTATCTTGATATTGAAATTCAAGTAAAAATCAATGATAATAGGA TGCAGAAAAAATCATTAAAACTTCAGTATTCTGATGAAACTACATACAATAGGGTTTATGAAATTGCGGGCCCCCGCGGA CTATTCACCAGAATTCCCATTTATAAAGGATGGTATGTCCAAAAAAGAGTCTCCTTGTATGGAGATCCATTCCCAGATCT TTTAAAACTGTAA
Upstream 100 bases:
>100_bases TTATGCTTTTATAAAGGGAATTATTCCTATTGGTAGAGTTCTCAAAATTAATAATACAGATGGTAACAATATTATAACTT TTAACAACTAAGGAGGTTTT
Downstream 100 bases:
>100_bases ACTTTTTAGCAAAAATTATGATTTTGGTATATAATATACGTATAAAAATAAAAAATTAAAATGAAGGATTAAAAAATGGA TACTATTAAATTAACCGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MADDQEKLLIDEEETVQIKDLNKVTTVNDTDLLLLDDGAASSNAITFKNFLDASKDKIFKGEGLDYFKQIIKSTIAEELA ADKDFVEKIYAKITDKLINNDSTNISNLFSKIKSRLTDSISSATLSRSDDLLIMPSSDTIQKTPVPKHILGVPSNFAYGR TRSTTLYPSDYENNAISINMEYNDDVTLIFSKSYDNSPVYLDIEIQVKINDNRMQKKSLKLQYSDETTYNRVYEIAGPRG LFTRIPIYKGWYVQKRVSLYGDPFPDLLKL
Sequences:
>Translated_270_residues MADDQEKLLIDEEETVQIKDLNKVTTVNDTDLLLLDDGAASSNAITFKNFLDASKDKIFKGEGLDYFKQIIKSTIAEELA ADKDFVEKIYAKITDKLINNDSTNISNLFSKIKSRLTDSISSATLSRSDDLLIMPSSDTIQKTPVPKHILGVPSNFAYGR TRSTTLYPSDYENNAISINMEYNDDVTLIFSKSYDNSPVYLDIEIQVKINDNRMQKKSLKLQYSDETTYNRVYEIAGPRG LFTRIPIYKGWYVQKRVSLYGDPFPDLLKL >Mature_269_residues ADDQEKLLIDEEETVQIKDLNKVTTVNDTDLLLLDDGAASSNAITFKNFLDASKDKIFKGEGLDYFKQIIKSTIAEELAA DKDFVEKIYAKITDKLINNDSTNISNLFSKIKSRLTDSISSATLSRSDDLLIMPSSDTIQKTPVPKHILGVPSNFAYGRT RSTTLYPSDYENNAISINMEYNDDVTLIFSKSYDNSPVYLDIEIQVKINDNRMQKKSLKLQYSDETTYNRVYEIAGPRGL FTRIPIYKGWYVQKRVSLYGDPFPDLLKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30679; Mature: 30548
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADDQEKLLIDEEETVQIKDLNKVTTVNDTDLLLLDDGAASSNAITFKNFLDASKDKIFK CCCCCCCEEECCCCEEEEEECCEEEEECCCEEEEEECCCCCCCCEEHHHHHCCCCCCEEC GEGLDYFKQIIKSTIAEELAADKDFVEKIYAKITDKLINNDSTNISNLFSKIKSRLTDSI CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH SSATLSRSDDLLIMPSSDTIQKTPVPKHILGVPSNFAYGRTRSTTLYPSDYENNAISINM HHHHCCCCCCEEEECCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCEEEEEE EYNDDVTLIFSKSYDNSPVYLDIEIQVKINDNRMQKKSLKLQYSDETTYNRVYEIAGPRG EECCCEEEEEECCCCCCCEEEEEEEEEEECCCCCCCCEEEEEECCCCCCCEEEEECCCCC LFTRIPIYKGWYVQKRVSLYGDPFPDLLKL CEEECCCCCCEEEEEEHHHCCCCCHHHHCC >Mature Secondary Structure ADDQEKLLIDEEETVQIKDLNKVTTVNDTDLLLLDDGAASSNAITFKNFLDASKDKIFK CCCCCCEEECCCCEEEEEECCEEEEECCCEEEEEECCCCCCCCEEHHHHHCCCCCCEEC GEGLDYFKQIIKSTIAEELAADKDFVEKIYAKITDKLINNDSTNISNLFSKIKSRLTDSI CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH SSATLSRSDDLLIMPSSDTIQKTPVPKHILGVPSNFAYGRTRSTTLYPSDYENNAISINM HHHHCCCCCCEEEECCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCEEEEEE EYNDDVTLIFSKSYDNSPVYLDIEIQVKINDNRMQKKSLKLQYSDETTYNRVYEIAGPRG EECCCEEEEEECCCCCCCEEEEEEEEEEECCCCCCCCEEEEEECCCCCCCEEEEECCCCC LFTRIPIYKGWYVQKRVSLYGDPFPDLLKL CEEECCCCCCEEEEEEHHHCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA