Definition Borrelia burgdorferi B31 plasmid lp38, complete sequence.
Accession NC_001856
Length 38,829

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The map label for this gene is 11496875

Identifier: 11496875

GI number: 11496875

Start: 32498

End: 33220

Strand: Direct

Name: 11496875

Synonym: BBJ45

Alternate gene names: NA

Gene position: 32498-33220 (Clockwise)

Preceding gene: 11496874

Following gene: NA

Centisome position: 83.7

GC content: 35.96

Gene sequence:

>723_bases
ATGGAAAAAGGTGGTGGCCACTCGAATCCTAAGGTTGTGGGTGTAAAAGGTATGTTTGAATCTGCATTGGAAATTAAGGC
CTTAAGTAAGGAGGATAATCCTAAAGATATGGTTGAAAAGGCTAGTATTTCTGCCAAGGAATCTAAAGATAAGGTTTTAA
GTAGTAAAAAGGGGAATGCTAGTATAGCATTGGGAGAGGTTCCCTCACTTGTAAGAGATATTAGAGAATCAGCCAAAAAG
ATTGATGAATCTTTAAAGCTATTGATAGCTTCAGGATATGATGCCTCATATCCTCTTTCAGACAATATGAAGATCGGGAT
AGGTAGAATATGCTTGTTAGACAAGATATTAGAAGCTGTGATGCCAAAAATAAATGATAGCGATAATGATAATTTTGATG
ATAATATCTGCGAGAAAATAAAGAAAGTGGTAGATGAATTTAATAAAAATGAAAAGGATGAGTATAGTTGTTCTATAATG
AGCTTGAATTCTTATCCTAAGACAAAAGGAAAAGATTTGGTTAAAAAATGTATAAATGAGTTAATGAAAGATGTAGAGAA
ATACCTTGGCGACGTTAAAGGTAATGGCAATGGTGTTTGTGGTGAGTTGTTGCAGGGTGCTAAGAGTGCATCGGGACAGT
TTGGCGAGTCATTGAAATTGCTAAGCGAAGCTGCCAGTGCTATAGCGGAAGCTTGTAAACGGCTTGCTTATGGTATATTA
TGA

Upstream 100 bases:

>100_bases
TGTAAAGAGAGGTTTAAATATGATGAAAATATATTTATATTTGTTTAGTGGCTTTTTAGCAATGTCTTGTAAATTATGAT
ATTCAAATTTAAATGACACT

Downstream 100 bases:

>100_bases
AAATAATCATTTCTATTTATGTATTAATTAGTGTTGTATTTATATAGGTGATAAGTTAAAGCACATCTACTGTACTTTAA
CTATTGTTATAGCTTTCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MEKGGGHSNPKVVGVKGMFESALEIKALSKEDNPKDMVEKASISAKESKDKVLSSKKGNASIALGEVPSLVRDIRESAKK
IDESLKLLIASGYDASYPLSDNMKIGIGRICLLDKILEAVMPKINDSDNDNFDDNICEKIKKVVDEFNKNEKDEYSCSIM
SLNSYPKTKGKDLVKKCINELMKDVEKYLGDVKGNGNGVCGELLQGAKSASGQFGESLKLLSEAASAIAEACKRLAYGIL

Sequences:

>Translated_240_residues
MEKGGGHSNPKVVGVKGMFESALEIKALSKEDNPKDMVEKASISAKESKDKVLSSKKGNASIALGEVPSLVRDIRESAKK
IDESLKLLIASGYDASYPLSDNMKIGIGRICLLDKILEAVMPKINDSDNDNFDDNICEKIKKVVDEFNKNEKDEYSCSIM
SLNSYPKTKGKDLVKKCINELMKDVEKYLGDVKGNGNGVCGELLQGAKSASGQFGESLKLLSEAASAIAEACKRLAYGIL
>Mature_240_residues
MEKGGGHSNPKVVGVKGMFESALEIKALSKEDNPKDMVEKASISAKESKDKVLSSKKGNASIALGEVPSLVRDIRESAKK
IDESLKLLIASGYDASYPLSDNMKIGIGRICLLDKILEAVMPKINDSDNDNFDDNICEKIKKVVDEFNKNEKDEYSCSIM
SLNSYPKTKGKDLVKKCINELMKDVEKYLGDVKGNGNGVCGELLQGAKSASGQFGESLKLLSEAASAIAEACKRLAYGIL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25946; Mature: 25946

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKGGGHSNPKVVGVKGMFESALEIKALSKEDNPKDMVEKASISAKESKDKVLSSKKGNA
CCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHCCCCCC
SIALGEVPSLVRDIRESAKKIDESLKLLIASGYDASYPLSDNMKIGIGRICLLDKILEAV
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECHHHHHHHHHHHHHH
MPKINDSDNDNFDDNICEKIKKVVDEFNKNEKDEYSCSIMSLNSYPKTKGKDLVKKCINE
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHEEEEECCCCCCCCCHHHHHHHHHH
LMKDVEKYLGDVKGNGNGVCGELLQGAKSASGQFGESLKLLSEAASAIAEACKRLAYGIL
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEKGGGHSNPKVVGVKGMFESALEIKALSKEDNPKDMVEKASISAKESKDKVLSSKKGNA
CCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHCCCCCC
SIALGEVPSLVRDIRESAKKIDESLKLLIASGYDASYPLSDNMKIGIGRICLLDKILEAV
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECHHHHHHHHHHHHHH
MPKINDSDNDNFDDNICEKIKKVVDEFNKNEKDEYSCSIMSLNSYPKTKGKDLVKKCINE
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHEEEEECCCCCCCCCHHHHHHHHHH
LMKDVEKYLGDVKGNGNGVCGELLQGAKSASGQFGESLKLLSEAASAIAEACKRLAYGIL
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA