Definition | Borrelia burgdorferi B31 plasmid lp38, complete sequence. |
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Accession | NC_001856 |
Length | 38,829 |
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The map label for this gene is 11496875
Identifier: 11496875
GI number: 11496875
Start: 32498
End: 33220
Strand: Direct
Name: 11496875
Synonym: BBJ45
Alternate gene names: NA
Gene position: 32498-33220 (Clockwise)
Preceding gene: 11496874
Following gene: NA
Centisome position: 83.7
GC content: 35.96
Gene sequence:
>723_bases ATGGAAAAAGGTGGTGGCCACTCGAATCCTAAGGTTGTGGGTGTAAAAGGTATGTTTGAATCTGCATTGGAAATTAAGGC CTTAAGTAAGGAGGATAATCCTAAAGATATGGTTGAAAAGGCTAGTATTTCTGCCAAGGAATCTAAAGATAAGGTTTTAA GTAGTAAAAAGGGGAATGCTAGTATAGCATTGGGAGAGGTTCCCTCACTTGTAAGAGATATTAGAGAATCAGCCAAAAAG ATTGATGAATCTTTAAAGCTATTGATAGCTTCAGGATATGATGCCTCATATCCTCTTTCAGACAATATGAAGATCGGGAT AGGTAGAATATGCTTGTTAGACAAGATATTAGAAGCTGTGATGCCAAAAATAAATGATAGCGATAATGATAATTTTGATG ATAATATCTGCGAGAAAATAAAGAAAGTGGTAGATGAATTTAATAAAAATGAAAAGGATGAGTATAGTTGTTCTATAATG AGCTTGAATTCTTATCCTAAGACAAAAGGAAAAGATTTGGTTAAAAAATGTATAAATGAGTTAATGAAAGATGTAGAGAA ATACCTTGGCGACGTTAAAGGTAATGGCAATGGTGTTTGTGGTGAGTTGTTGCAGGGTGCTAAGAGTGCATCGGGACAGT TTGGCGAGTCATTGAAATTGCTAAGCGAAGCTGCCAGTGCTATAGCGGAAGCTTGTAAACGGCTTGCTTATGGTATATTA TGA
Upstream 100 bases:
>100_bases TGTAAAGAGAGGTTTAAATATGATGAAAATATATTTATATTTGTTTAGTGGCTTTTTAGCAATGTCTTGTAAATTATGAT ATTCAAATTTAAATGACACT
Downstream 100 bases:
>100_bases AAATAATCATTTCTATTTATGTATTAATTAGTGTTGTATTTATATAGGTGATAAGTTAAAGCACATCTACTGTACTTTAA CTATTGTTATAGCTTTCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MEKGGGHSNPKVVGVKGMFESALEIKALSKEDNPKDMVEKASISAKESKDKVLSSKKGNASIALGEVPSLVRDIRESAKK IDESLKLLIASGYDASYPLSDNMKIGIGRICLLDKILEAVMPKINDSDNDNFDDNICEKIKKVVDEFNKNEKDEYSCSIM SLNSYPKTKGKDLVKKCINELMKDVEKYLGDVKGNGNGVCGELLQGAKSASGQFGESLKLLSEAASAIAEACKRLAYGIL
Sequences:
>Translated_240_residues MEKGGGHSNPKVVGVKGMFESALEIKALSKEDNPKDMVEKASISAKESKDKVLSSKKGNASIALGEVPSLVRDIRESAKK IDESLKLLIASGYDASYPLSDNMKIGIGRICLLDKILEAVMPKINDSDNDNFDDNICEKIKKVVDEFNKNEKDEYSCSIM SLNSYPKTKGKDLVKKCINELMKDVEKYLGDVKGNGNGVCGELLQGAKSASGQFGESLKLLSEAASAIAEACKRLAYGIL >Mature_240_residues MEKGGGHSNPKVVGVKGMFESALEIKALSKEDNPKDMVEKASISAKESKDKVLSSKKGNASIALGEVPSLVRDIRESAKK IDESLKLLIASGYDASYPLSDNMKIGIGRICLLDKILEAVMPKINDSDNDNFDDNICEKIKKVVDEFNKNEKDEYSCSIM SLNSYPKTKGKDLVKKCINELMKDVEKYLGDVKGNGNGVCGELLQGAKSASGQFGESLKLLSEAASAIAEACKRLAYGIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25946; Mature: 25946
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKGGGHSNPKVVGVKGMFESALEIKALSKEDNPKDMVEKASISAKESKDKVLSSKKGNA CCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHCCCCCC SIALGEVPSLVRDIRESAKKIDESLKLLIASGYDASYPLSDNMKIGIGRICLLDKILEAV EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECHHHHHHHHHHHHHH MPKINDSDNDNFDDNICEKIKKVVDEFNKNEKDEYSCSIMSLNSYPKTKGKDLVKKCINE CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHEEEEECCCCCCCCCHHHHHHHHHH LMKDVEKYLGDVKGNGNGVCGELLQGAKSASGQFGESLKLLSEAASAIAEACKRLAYGIL HHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEKGGGHSNPKVVGVKGMFESALEIKALSKEDNPKDMVEKASISAKESKDKVLSSKKGNA CCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHCCCCCC SIALGEVPSLVRDIRESAKKIDESLKLLIASGYDASYPLSDNMKIGIGRICLLDKILEAV EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECHHHHHHHHHHHHHH MPKINDSDNDNFDDNICEKIKKVVDEFNKNEKDEYSCSIMSLNSYPKTKGKDLVKKCINE CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHEEEEECCCCCCCCCHHHHHHHHHH LMKDVEKYLGDVKGNGNGVCGELLQGAKSASGQFGESLKLLSEAASAIAEACKRLAYGIL HHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA