Definition | Borrelia burgdorferi B31 plasmid lp38, complete sequence. |
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Accession | NC_001856 |
Length | 38,829 |
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The map label for this gene is 11496863
Identifier: 11496863
GI number: 11496863
Start: 927
End: 1211
Strand: Direct
Name: 11496863
Synonym: BBJ02
Alternate gene names: NA
Gene position: 927-1211 (Clockwise)
Preceding gene: 11496862
Following gene: 11496840
Centisome position: 2.39
GC content: 24.91
Gene sequence:
>285_bases GTGATTAATCACTTATTATGTCTTAAAAAAGAGACTCTAGATACACTGACCGTTTCAGATTTAAAAAAGCTTAAAAATTC GTTTGAAAAATTATTATCTATAAAAACAGATATCTCAAAAATGTTAGAACAGCTTTTATTAGATTATAAAGATTATATAA ATTCTACAAAAACAGATATTGCTAAGCTTGAATCTCATTTAACGGAACTTTACAAGCAAATTGTAAAAAAAAGCTTCCAA ACAACAGAGCTGAAAAATAACATATTATCAATAAGCAACCTTTAA
Upstream 100 bases:
>100_bases TACCAATAAATTAGCGAATCTTTCGAAGATTTTAATTCGATCAAAACAAAAAACCCTCCTATTTGGCACCTTTTGCAACT TCGGAAGCACTTTTGACACA
Downstream 100 bases:
>100_bases AGTTATGTTATTGAAATTGATATCATGTAAAAGCCTATCCTTTATAAAAAGGATAGGCTTAATAGTGAACTACTATTTCT ATAATCAAAGATTATAGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Antigen P; Virulent Strain Associated Lipoprotein; Borrelia Virulent Strain Associated Lipoprotein; Surface Protein
Number of amino acids: Translated: 94; Mature: 94
Protein sequence:
>94_residues MINHLLCLKKETLDTLTVSDLKKLKNSFEKLLSIKTDISKMLEQLLLDYKDYINSTKTDIAKLESHLTELYKQIVKKSFQ TTELKNNILSISNL
Sequences:
>Translated_94_residues MINHLLCLKKETLDTLTVSDLKKLKNSFEKLLSIKTDISKMLEQLLLDYKDYINSTKTDIAKLESHLTELYKQIVKKSFQ TTELKNNILSISNL >Mature_94_residues MINHLLCLKKETLDTLTVSDLKKLKNSFEKLLSIKTDISKMLEQLLLDYKDYINSTKTDIAKLESHLTELYKQIVKKSFQ TTELKNNILSISNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10917; Mature: 10917
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINHLLCLKKETLDTLTVSDLKKLKNSFEKLLSIKTDISKMLEQLLLDYKDYINSTKTDI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH AKLESHLTELYKQIVKKSFQTTELKNNILSISNL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MINHLLCLKKETLDTLTVSDLKKLKNSFEKLLSIKTDISKMLEQLLLDYKDYINSTKTDI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH AKLESHLTELYKQIVKKSFQTTELKNNILSISNL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA