Definition Borrelia burgdorferi B31 plasmid lp38, complete sequence.
Accession NC_001856
Length 38,829

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The map label for this gene is 11496853

Identifier: 11496853

GI number: 11496853

Start: 23366

End: 24088

Strand: Direct

Name: 11496853

Synonym: BBJ31

Alternate gene names: NA

Gene position: 23366-24088 (Clockwise)

Preceding gene: 11496852

Following gene: 11496855

Centisome position: 60.18

GC content: 35.68

Gene sequence:

>723_bases
ATGGAAAAAGGTGGTGGCCACTCGAATCCTAAGGTTGTGGGTGTAAAAGGTATGTTTGAATCTGCATTGGAAATTAAGGC
CTTAAGTAAGGAGGATAATCCTAAAGATATGGTTGAAAAGGCTAGTATTTCTGCCAAGGAATCTAAAGATAAGGTTTTAA
GTAGTAAAAAGGGGAATGCTAGTATAGCATTGGGAGAGGTTCCCTCACTTGTAAGAGATATTAGAGAATCAGCCAAAAAG
ATTGATGAATCTTTAAAGCTATTGATAGCTTCAGGATATGATGCCTCATATCCTCTTTCAGACAATATGAAGATCGGGAT
AGGTAGAATATGCTTGTTAGATAAGATATTAGAAGCTGTGATGCCAAAAATAAATGATAGCGATAATGATAATTTTGATG
ATAATAGCTGCGAGAAAATAAAGAAAGTGGTAGATGAATTTAATAAAAATGAAAAGGATGAGTATAGTTGTTCTATAATG
AGCTTGAATTCTTATCCTAAGACAAAAGGAAAAGATTTGGTTAAAAAATGTATAAATGAGTTAATGAAAGATGTAGAGAA
ATACCTTGGCGACGTTAAAGGTAATGGCAATGGTGTTTGTGGTGAGTTGTTGCAGGGTGCTAAGAGTGCATCGGGACAGT
TTGGCGAGTCATTGAAATTGCTAAGCGAAGCTGCCAGTTCTATAGCGGAAGCTTGTAAACGGCTTGCTTATGATATATTA
TGA

Upstream 100 bases:

>100_bases
TGTAAAGAGAGGTTTAAATATGATGAAAATATATTTATATTTGTTTAGTGGCTTTTTAGCAATGTCTTGTAAATTATGAT
ATTCAAATTTAAATGACACT

Downstream 100 bases:

>100_bases
AAATAATCATTTCTATTTATATATTAATTAGTGTTGTATTTATATAGGTGATAAGTTAAAGTACATCTACTGTACTTTAA
CTATTGTTATAATTTTCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MEKGGGHSNPKVVGVKGMFESALEIKALSKEDNPKDMVEKASISAKESKDKVLSSKKGNASIALGEVPSLVRDIRESAKK
IDESLKLLIASGYDASYPLSDNMKIGIGRICLLDKILEAVMPKINDSDNDNFDDNSCEKIKKVVDEFNKNEKDEYSCSIM
SLNSYPKTKGKDLVKKCINELMKDVEKYLGDVKGNGNGVCGELLQGAKSASGQFGESLKLLSEAASSIAEACKRLAYDIL

Sequences:

>Translated_240_residues
MEKGGGHSNPKVVGVKGMFESALEIKALSKEDNPKDMVEKASISAKESKDKVLSSKKGNASIALGEVPSLVRDIRESAKK
IDESLKLLIASGYDASYPLSDNMKIGIGRICLLDKILEAVMPKINDSDNDNFDDNSCEKIKKVVDEFNKNEKDEYSCSIM
SLNSYPKTKGKDLVKKCINELMKDVEKYLGDVKGNGNGVCGELLQGAKSASGQFGESLKLLSEAASSIAEACKRLAYDIL
>Mature_240_residues
MEKGGGHSNPKVVGVKGMFESALEIKALSKEDNPKDMVEKASISAKESKDKVLSSKKGNASIALGEVPSLVRDIRESAKK
IDESLKLLIASGYDASYPLSDNMKIGIGRICLLDKILEAVMPKINDSDNDNFDDNSCEKIKKVVDEFNKNEKDEYSCSIM
SLNSYPKTKGKDLVKKCINELMKDVEKYLGDVKGNGNGVCGELLQGAKSASGQFGESLKLLSEAASSIAEACKRLAYDIL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25994; Mature: 25994

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKGGGHSNPKVVGVKGMFESALEIKALSKEDNPKDMVEKASISAKESKDKVLSSKKGNA
CCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHCCCCCC
SIALGEVPSLVRDIRESAKKIDESLKLLIASGYDASYPLSDNMKIGIGRICLLDKILEAV
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECHHHHHHHHHHHHHH
MPKINDSDNDNFDDNSCEKIKKVVDEFNKNEKDEYSCSIMSLNSYPKTKGKDLVKKCINE
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHH
LMKDVEKYLGDVKGNGNGVCGELLQGAKSASGQFGESLKLLSEAASSIAEACKRLAYDIL
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEKGGGHSNPKVVGVKGMFESALEIKALSKEDNPKDMVEKASISAKESKDKVLSSKKGNA
CCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHCCCCCC
SIALGEVPSLVRDIRESAKKIDESLKLLIASGYDASYPLSDNMKIGIGRICLLDKILEAV
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECHHHHHHHHHHHHHH
MPKINDSDNDNFDDNSCEKIKKVVDEFNKNEKDEYSCSIMSLNSYPKTKGKDLVKKCINE
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHH
LMKDVEKYLGDVKGNGNGVCGELLQGAKSASGQFGESLKLLSEAASSIAEACKRLAYDIL
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA