Definition | Borrelia burgdorferi B31 plasmid lp38, complete sequence. |
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Accession | NC_001856 |
Length | 38,829 |
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The map label for this gene is 11496849
Identifier: 11496849
GI number: 11496849
Start: 10040
End: 10168
Strand: Reverse
Name: 11496849
Synonym: BBJ15
Alternate gene names: NA
Gene position: 10168-10040 (Counterclockwise)
Preceding gene: 11496834
Following gene: 11496848
Centisome position: 26.19
GC content: 20.16
Gene sequence:
>129_bases ATGTCTATTTCTTGGCTTTTTATTATTTTTAAATTTATAAGTCAAACAATAGATAATGTACAAAAAATAAACATTAATAA AACAGGCGTATTTGTAGCACTTATAAAATTGTTAAAATTGAACATATAG
Upstream 100 bases:
>100_bases CCGACTTAATTTTGAATCTATGTCTTTAATGATGTTTTTGTTAAAAATATCACTTGGTTATTTATTTTTATTTATTTAAG GGGGATCCAAGAGATTAATA
Downstream 100 bases:
>100_bases TTGGTGCTGAAAATGAAAATATGCGAGACAATGTACTATTAATAAAAGGTATAGTTACTAAAACCTTTGAATCTATATTT TTTTAAAAAATATTCTAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 42; Mature: 41
Protein sequence:
>42_residues MSISWLFIIFKFISQTIDNVQKININKTGVFVALIKLLKLNI
Sequences:
>Translated_42_residues MSISWLFIIFKFISQTIDNVQKININKTGVFVALIKLLKLNI >Mature_41_residues SISWLFIIFKFISQTIDNVQKININKTGVFVALIKLLKLNI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4866; Mature: 4735
Theoretical pI: Translated: 10.98; Mature: 10.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSISWLFIIFKFISQTIDNVQKININKTGVFVALIKLLKLNI CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure SISWLFIIFKFISQTIDNVQKININKTGVFVALIKLLKLNI CHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA