Definition | Borrelia burgdorferi B31 plasmid lp38, complete sequence. |
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Accession | NC_001856 |
Length | 38,829 |
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The map label for this gene is 11496839
Identifier: 11496839
GI number: 11496839
Start: 29905
End: 30771
Strand: Reverse
Name: 11496839
Synonym: BBJ41
Alternate gene names: NA
Gene position: 30771-29905 (Counterclockwise)
Preceding gene: 11496872
Following gene: 11496861
Centisome position: 79.25
GC content: 26.82
Gene sequence:
>867_bases TTGAAAAACCTTAAATTAAATATTATTAAACTTAACGTTATTACAGCAATATTAACTTCAATTTGCATATCATGTGCACC TTTTGGCAATGTTAATCCAAACGAACCAAAAAATCCTACCACTTCTAAAAGTCTAAAAAAAACAAAACGAAGCAACAATT CTAGAAATCTAAAAAACACAAGCAATCACACCAATTCAGAAAATTTAACAGGAAATTCAACAAAAAATCCATCAGAAAAT AACCAAAATCTTGAAAATGAATCTCAAAATTCAAAATCTTCAAATCAAAATTCTCAAGAAGAAACCACAATCTCAAAATT AAAAAACATTGGTAAAGACCTGGAAGCTCAAAAAAAGAAAGAAGATACRGGAATAACTAAAATGTCTAAAATTGATAATG CTAAATATGATTTTCTAGAGACTTTTAAACTTAAACAAGATGATGTTTTTATGTTTCAKGCTAAAATGAAATTAAAAAGA ATAATTTACCCATCCCTAAATTACGATACAAAAAAAATATTGGTATTAAAAGAAATTCTTGAAAAACTTGATACAGAAGA TAATAACCGAAGAATAGCTGGTCAATTTTTAGAAACATCAAGGGATATTCAACTTCATCTAGAAGACACGTATTTAAAAA AAATACAAGATACATTACAAACTCTAAGTGAAAAAGAAGCCGAAAAGTTGCTACAAGGTGTAAAACTTGATTTAAAGAAA AAACAAAACTTTGCTAAAAGTTTAAACGCAACCATTGACGCTTACAATAAAAATGTTGATAACATTAAAATAGATAATAA AGCGCTAGCAAAACACATAAAGGATAAATATTCCCATCCTCTTTATCTACTAAACCAAGCTGATTAA
Upstream 100 bases:
>100_bases TAAATAAGTTTAATATCATTTGACAACAATATTAAATTGTAATATTATTATTTTTAACTAAAATTAATATTTATTAATTC AAATTTATAAGGAGAACATT
Downstream 100 bases:
>100_bases TCTAAATAAAAAAATAATATGCTGCACTTTATATTTTAAAAAGAGAAGAATTAACTTCTCTTTTTTGTGTTCATACAATC TAGATTATCACTAAAAACAT
Product: antigen, P35, putative
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MKNLKLNIIKLNVITAILTSICISCAPFGNVNPNEPKNPTTSKSLKKTKRSNNSRNLKNTSNHTNSENLTGNSTKNPSEN NQNLENESQNSKSSNQNSQEETTISKLKNIGKDLEAQKKKEDTGITKMSKIDNAKYDFLETFKLKQDDVFMFXAKMKLKR IIYPSLNYDTKKILVLKEILEKLDTEDNNRRIAGQFLETSRDIQLHLEDTYLKKIQDTLQTLSEKEAEKLLQGVKLDLKK KQNFAKSLNATIDAYNKNVDNIKIDNKALAKHIKDKYSHPLYLLNQAD
Sequences:
>Translated_288_residues MKNLKLNIIKLNVITAILTSICISCAPFGNVNPNEPKNPTTSKSLKKTKRSNNSRNLKNTSNHTNSENLTGNSTKNPSEN NQNLENESQNSKSSNQNSQEETTISKLKNIGKDLEAQKKKEDTGITKMSKIDNAKYDFLETFKLKQDDVFMFXAKMKLKR IIYPSLNYDTKKILVLKEILEKLDTEDNNRRIAGQFLETSRDIQLHLEDTYLKKIQDTLQTLSEKEAEKLLQGVKLDLKK KQNFAKSLNATIDAYNKNVDNIKIDNKALAKHIKDKYSHPLYLLNQAD >Mature_288_residues MKNLKLNIIKLNVITAILTSICISCAPFGNVNPNEPKNPTTSKSLKKTKRSNNSRNLKNTSNHTNSENLTGNSTKNPSEN NQNLENESQNSKSSNQNSQEETTISKLKNIGKDLEAQKKKEDTGITKMSKIDNAKYDFLETFKLKQDDVFMFXAKMKLKR IIYPSLNYDTKKILVLKEILEKLDTEDNNRRIAGQFLETSRDIQLHLEDTYLKKIQDTLQTLSEKEAEKLLQGVKLDLKK KQNFAKSLNATIDAYNKNVDNIKIDNKALAKHIKDKYSHPLYLLNQAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32850; Mature: 32850
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNLKLNIIKLNVITAILTSICISCAPFGNVNPNEPKNPTTSKSLKKTKRSNNSRNLKNT CCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC SNHTNSENLTGNSTKNPSENNQNLENESQNSKSSNQNSQEETTISKLKNIGKDLEAQKKK CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHH EDTGITKMSKIDNAKYDFLETFKLKQDDVFMFXAKMKLKRIIYPSLNYDTKKILVLKEIL HHCCCHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH EKLDTEDNNRRIAGQFLETSRDIQLHLEDTYLKKIQDTLQTLSEKEAEKLLQGVKLDLKK HHHCCCCCCCHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KQNFAKSLNATIDAYNKNVDNIKIDNKALAKHIKDKYSHPLYLLNQAD HHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHCCCCEEEEECCC >Mature Secondary Structure MKNLKLNIIKLNVITAILTSICISCAPFGNVNPNEPKNPTTSKSLKKTKRSNNSRNLKNT CCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC SNHTNSENLTGNSTKNPSENNQNLENESQNSKSSNQNSQEETTISKLKNIGKDLEAQKKK CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHH EDTGITKMSKIDNAKYDFLETFKLKQDDVFMFXAKMKLKRIIYPSLNYDTKKILVLKEIL HHCCCHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH EKLDTEDNNRRIAGQFLETSRDIQLHLEDTYLKKIQDTLQTLSEKEAEKLLQGVKLDLKK HHHCCCCCCCHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KQNFAKSLNATIDAYNKNVDNIKIDNKALAKHIKDKYSHPLYLLNQAD HHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA