Definition Borrelia burgdorferi B31 plasmid lp38, complete sequence.
Accession NC_001856
Length 38,829

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The map label for this gene is 11496839

Identifier: 11496839

GI number: 11496839

Start: 29905

End: 30771

Strand: Reverse

Name: 11496839

Synonym: BBJ41

Alternate gene names: NA

Gene position: 30771-29905 (Counterclockwise)

Preceding gene: 11496872

Following gene: 11496861

Centisome position: 79.25

GC content: 26.82

Gene sequence:

>867_bases
TTGAAAAACCTTAAATTAAATATTATTAAACTTAACGTTATTACAGCAATATTAACTTCAATTTGCATATCATGTGCACC
TTTTGGCAATGTTAATCCAAACGAACCAAAAAATCCTACCACTTCTAAAAGTCTAAAAAAAACAAAACGAAGCAACAATT
CTAGAAATCTAAAAAACACAAGCAATCACACCAATTCAGAAAATTTAACAGGAAATTCAACAAAAAATCCATCAGAAAAT
AACCAAAATCTTGAAAATGAATCTCAAAATTCAAAATCTTCAAATCAAAATTCTCAAGAAGAAACCACAATCTCAAAATT
AAAAAACATTGGTAAAGACCTGGAAGCTCAAAAAAAGAAAGAAGATACRGGAATAACTAAAATGTCTAAAATTGATAATG
CTAAATATGATTTTCTAGAGACTTTTAAACTTAAACAAGATGATGTTTTTATGTTTCAKGCTAAAATGAAATTAAAAAGA
ATAATTTACCCATCCCTAAATTACGATACAAAAAAAATATTGGTATTAAAAGAAATTCTTGAAAAACTTGATACAGAAGA
TAATAACCGAAGAATAGCTGGTCAATTTTTAGAAACATCAAGGGATATTCAACTTCATCTAGAAGACACGTATTTAAAAA
AAATACAAGATACATTACAAACTCTAAGTGAAAAAGAAGCCGAAAAGTTGCTACAAGGTGTAAAACTTGATTTAAAGAAA
AAACAAAACTTTGCTAAAAGTTTAAACGCAACCATTGACGCTTACAATAAAAATGTTGATAACATTAAAATAGATAATAA
AGCGCTAGCAAAACACATAAAGGATAAATATTCCCATCCTCTTTATCTACTAAACCAAGCTGATTAA

Upstream 100 bases:

>100_bases
TAAATAAGTTTAATATCATTTGACAACAATATTAAATTGTAATATTATTATTTTTAACTAAAATTAATATTTATTAATTC
AAATTTATAAGGAGAACATT

Downstream 100 bases:

>100_bases
TCTAAATAAAAAAATAATATGCTGCACTTTATATTTTAAAAAGAGAAGAATTAACTTCTCTTTTTTGTGTTCATACAATC
TAGATTATCACTAAAAACAT

Product: antigen, P35, putative

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MKNLKLNIIKLNVITAILTSICISCAPFGNVNPNEPKNPTTSKSLKKTKRSNNSRNLKNTSNHTNSENLTGNSTKNPSEN
NQNLENESQNSKSSNQNSQEETTISKLKNIGKDLEAQKKKEDTGITKMSKIDNAKYDFLETFKLKQDDVFMFXAKMKLKR
IIYPSLNYDTKKILVLKEILEKLDTEDNNRRIAGQFLETSRDIQLHLEDTYLKKIQDTLQTLSEKEAEKLLQGVKLDLKK
KQNFAKSLNATIDAYNKNVDNIKIDNKALAKHIKDKYSHPLYLLNQAD

Sequences:

>Translated_288_residues
MKNLKLNIIKLNVITAILTSICISCAPFGNVNPNEPKNPTTSKSLKKTKRSNNSRNLKNTSNHTNSENLTGNSTKNPSEN
NQNLENESQNSKSSNQNSQEETTISKLKNIGKDLEAQKKKEDTGITKMSKIDNAKYDFLETFKLKQDDVFMFXAKMKLKR
IIYPSLNYDTKKILVLKEILEKLDTEDNNRRIAGQFLETSRDIQLHLEDTYLKKIQDTLQTLSEKEAEKLLQGVKLDLKK
KQNFAKSLNATIDAYNKNVDNIKIDNKALAKHIKDKYSHPLYLLNQAD
>Mature_288_residues
MKNLKLNIIKLNVITAILTSICISCAPFGNVNPNEPKNPTTSKSLKKTKRSNNSRNLKNTSNHTNSENLTGNSTKNPSEN
NQNLENESQNSKSSNQNSQEETTISKLKNIGKDLEAQKKKEDTGITKMSKIDNAKYDFLETFKLKQDDVFMFXAKMKLKR
IIYPSLNYDTKKILVLKEILEKLDTEDNNRRIAGQFLETSRDIQLHLEDTYLKKIQDTLQTLSEKEAEKLLQGVKLDLKK
KQNFAKSLNATIDAYNKNVDNIKIDNKALAKHIKDKYSHPLYLLNQAD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32850; Mature: 32850

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLKLNIIKLNVITAILTSICISCAPFGNVNPNEPKNPTTSKSLKKTKRSNNSRNLKNT
CCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC
SNHTNSENLTGNSTKNPSENNQNLENESQNSKSSNQNSQEETTISKLKNIGKDLEAQKKK
CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHH
EDTGITKMSKIDNAKYDFLETFKLKQDDVFMFXAKMKLKRIIYPSLNYDTKKILVLKEIL
HHCCCHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
EKLDTEDNNRRIAGQFLETSRDIQLHLEDTYLKKIQDTLQTLSEKEAEKLLQGVKLDLKK
HHHCCCCCCCHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQNFAKSLNATIDAYNKNVDNIKIDNKALAKHIKDKYSHPLYLLNQAD
HHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHCCCCEEEEECCC
>Mature Secondary Structure
MKNLKLNIIKLNVITAILTSICISCAPFGNVNPNEPKNPTTSKSLKKTKRSNNSRNLKNT
CCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC
SNHTNSENLTGNSTKNPSENNQNLENESQNSKSSNQNSQEETTISKLKNIGKDLEAQKKK
CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHH
EDTGITKMSKIDNAKYDFLETFKLKQDDVFMFXAKMKLKRIIYPSLNYDTKKILVLKEIL
HHCCCHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
EKLDTEDNNRRIAGQFLETSRDIQLHLEDTYLKKIQDTLQTLSEKEAEKLLQGVKLDLKK
HHHCCCCCCCHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQNFAKSLNATIDAYNKNVDNIKIDNKALAKHIKDKYSHPLYLLNQAD
HHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA