Definition Borrelia burgdorferi B31 plasmid lp36, complete sequence.
Accession NC_001855
Length 36,849

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The map label for this gene is 11496825

Identifier: 11496825

GI number: 11496825

Start: 24293

End: 24670

Strand: Direct

Name: 11496825

Synonym: BBK39

Alternate gene names: NA

Gene position: 24293-24670 (Clockwise)

Preceding gene: 11496816

Following gene: 11496792

Centisome position: 65.93

GC content: 35.98

Gene sequence:

>378_bases
ATGCTTACTATAAAAATATTAGAAATGGCAAAAGAAAGTGGCCTTAAGCATGAAGATGATGATTATGGTTTGCGTGATAA
GGTAAATAAGGTAATAGAAGAATTTAGAAGAGGAAAAGAAGGTGGTCTTGTAGCATTTTCTCTTAAAGTAGAAGGCGCTA
AGAAAAACGGTGAAGTTGTTAAGGAGTGTGTAACTGGGTTAATGGGAAAAGTAGAAAGCCTTTTTGGCGATATTAAAGGA
AATGGCGATGGTGTTGCTCAAGAGTTGATGCAAGAAGGTAAGAGTGAAGAAAAACGGTTTAGTAAGCCATTAAGCTTAAT
AAGAGAAGTTGTGTGTGATATAACAGAAGCATGCAAGCGACTTATTTATGACCTGTAG

Upstream 100 bases:

>100_bases
ACAGCTAGAAGGATAGAGGCAGGTGTATCTGCATTAATATCTTCAGGATAAATGTAGCAGGAGCACTTAAAGATAATCTT
AAGACAGGGATAAGTAGCAT

Downstream 100 bases:

>100_bases
AATGAATAGTAGCAGTTCTTAACTGCTATTCTTTATTGTTATTTTTTAAAGCCAAGCTTCTCTATTCTATAAAAATAGAA
GCCAGAAGCTTAGTCTAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MLTIKILEMAKESGLKHEDDDYGLRDKVNKVIEEFRRGKEGGLVAFSLKVEGAKKNGEVVKECVTGLMGKVESLFGDIKG
NGDGVAQELMQEGKSEEKRFSKPLSLIREVVCDITEACKRLIYDL

Sequences:

>Translated_125_residues
MLTIKILEMAKESGLKHEDDDYGLRDKVNKVIEEFRRGKEGGLVAFSLKVEGAKKNGEVVKECVTGLMGKVESLFGDIKG
NGDGVAQELMQEGKSEEKRFSKPLSLIREVVCDITEACKRLIYDL
>Mature_125_residues
MLTIKILEMAKESGLKHEDDDYGLRDKVNKVIEEFRRGKEGGLVAFSLKVEGAKKNGEVVKECVTGLMGKVESLFGDIKG
NGDGVAQELMQEGKSEEKRFSKPLSLIREVVCDITEACKRLIYDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13908; Mature: 13908

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTIKILEMAKESGLKHEDDDYGLRDKVNKVIEEFRRGKEGGLVAFSLKVEGAKKNGEVV
CCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCHHH
KECVTGLMGKVESLFGDIKGNGDGVAQELMQEGKSEEKRFSKPLSLIREVVCDITEACKR
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LIYDL
HHCCC
>Mature Secondary Structure
MLTIKILEMAKESGLKHEDDDYGLRDKVNKVIEEFRRGKEGGLVAFSLKVEGAKKNGEVV
CCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCHHH
KECVTGLMGKVESLFGDIKGNGDGVAQELMQEGKSEEKRFSKPLSLIREVVCDITEACKR
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LIYDL
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA