Definition | Borrelia burgdorferi B31 plasmid lp36, complete sequence. |
---|---|
Accession | NC_001855 |
Length | 36,849 |
Click here to switch to the map view.
The map label for this gene is 11496801
Identifier: 11496801
GI number: 11496801
Start: 5288
End: 6040
Strand: Reverse
Name: 11496801
Synonym: BBK07
Alternate gene names: NA
Gene position: 6040-5288 (Counterclockwise)
Preceding gene: 11496802
Following gene: 11496799
Centisome position: 16.39
GC content: 32.14
Gene sequence:
>753_bases ATGAGTAAACTAATATTGGCAATATCTATACTGCTAATAATTTCATGTAAATGGCATGTAGACAATCCCATTGATGAAGC AACTGCAGAAAGTAAATCAGCACTAACATCTGTTGATCAAGTATTAGATGAGATAAGTGAAGCTACAGGTCTAAGTTCGG AAAAAATCACAAAATTAACTCCGGAAGAGCTAGAAAATTTAGCAAAGGAAGCTCAAGATGATTCTGAAAAATCCAAAAAA GAAATTGAAGATCAAAAAAATACCAAGGAAAGTAAAAACATAGAAGTAAAGGATACTCCTCGCTTAATCAAATTGATTAA GAATTCATCAGAAAAAATTGATTCGGTTTTTCAAACACTAATTAATATAGGTTATAATGCTACCTATGCAGCCAAAAGTA ATTTGAAGAATGGACTAAAGATGGTGAAATTACTGGATGAGTTGCTAAAAATATCGGTAAGTAGCAATGGTGATAAAAGT ACCCAAAAATACAATGAACTTAAAACCGTTGTAAATAGGTTTAATGCTGAAAATTCAGCGATAAAGGTACCATTAGAAAA TGGTAGTAAAATTGAAGCCAAAAAGTGCATAAAAACTCTTATGACCAATGTGGAAACCTATTTCAAGGGCGTGAGCACCG AACTCAAAGATAAAAAAGACGACAAATATACTAAAATATTGGCAGCTTTGAGTGAGGCAGCCAATAAAATAGAGAATGCA GCAATGGCCATACATTTGTGCTTTAATAATTAA
Upstream 100 bases:
>100_bases CAAGTTAATTGTAAAGATTTTTGCAGTTAAGGTAGAAATGAATTTTGAGCTATAATTCACTAAATATATTAAATATTACA CTACAAGGAGGTGTTTACAA
Downstream 100 bases:
>100_bases AACTGGGCATTTTGGTTTACAATTCTAATAAAAAGAAAAATTCTAAAAATTTCAACTAAAATCCCAAAGTAATTTTCTAT TCAAAAAAAACACCCGCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 250; Mature: 249
Protein sequence:
>250_residues MSKLILAISILLIISCKWHVDNPIDEATAESKSALTSVDQVLDEISEATGLSSEKITKLTPEELENLAKEAQDDSEKSKK EIEDQKNTKESKNIEVKDTPRLIKLIKNSSEKIDSVFQTLINIGYNATYAAKSNLKNGLKMVKLLDELLKISVSSNGDKS TQKYNELKTVVNRFNAENSAIKVPLENGSKIEAKKCIKTLMTNVETYFKGVSTELKDKKDDKYTKILAALSEAANKIENA AMAIHLCFNN
Sequences:
>Translated_250_residues MSKLILAISILLIISCKWHVDNPIDEATAESKSALTSVDQVLDEISEATGLSSEKITKLTPEELENLAKEAQDDSEKSKK EIEDQKNTKESKNIEVKDTPRLIKLIKNSSEKIDSVFQTLINIGYNATYAAKSNLKNGLKMVKLLDELLKISVSSNGDKS TQKYNELKTVVNRFNAENSAIKVPLENGSKIEAKKCIKTLMTNVETYFKGVSTELKDKKDDKYTKILAALSEAANKIENA AMAIHLCFNN >Mature_249_residues SKLILAISILLIISCKWHVDNPIDEATAESKSALTSVDQVLDEISEATGLSSEKITKLTPEELENLAKEAQDDSEKSKKE IEDQKNTKESKNIEVKDTPRLIKLIKNSSEKIDSVFQTLINIGYNATYAAKSNLKNGLKMVKLLDELLKISVSSNGDKST QKYNELKTVVNRFNAENSAIKVPLENGSKIEAKKCIKTLMTNVETYFKGVSTELKDKKDDKYTKILAALSEAANKIENAA MAIHLCFNN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27758; Mature: 27627
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLILAISILLIISCKWHVDNPIDEATAESKSALTSVDQVLDEISEATGLSSEKITKLT CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC PEELENLAKEAQDDSEKSKKEIEDQKNTKESKNIEVKDTPRLIKLIKNSSEKIDSVFQTL HHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHH INIGYNATYAAKSNLKNGLKMVKLLDELLKISVSSNGDKSTQKYNELKTVVNRFNAENSA HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCE IKVPLENGSKIEAKKCIKTLMTNVETYFKGVSTELKDKKDDKYTKILAALSEAANKIENA EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHHHHHHHHH AMAIHLCFNN HHEEEEEECC >Mature Secondary Structure SKLILAISILLIISCKWHVDNPIDEATAESKSALTSVDQVLDEISEATGLSSEKITKLT CHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC PEELENLAKEAQDDSEKSKKEIEDQKNTKESKNIEVKDTPRLIKLIKNSSEKIDSVFQTL HHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHH INIGYNATYAAKSNLKNGLKMVKLLDELLKISVSSNGDKSTQKYNELKTVVNRFNAENSA HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCE IKVPLENGSKIEAKKCIKTLMTNVETYFKGVSTELKDKKDDKYTKILAALSEAANKIENA EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHHHHHHHHH AMAIHLCFNN HHEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA