Definition | Borrelia burgdorferi B31 plasmid lp36, complete sequence. |
---|---|
Accession | NC_001855 |
Length | 36,849 |
Click here to switch to the map view.
The map label for this gene is 11496780
Identifier: 11496780
GI number: 11496780
Start: 8164
End: 8880
Strand: Reverse
Name: 11496780
Synonym: BBK13
Alternate gene names: NA
Gene position: 8880-8164 (Counterclockwise)
Preceding gene: 11496819
Following gene: 11496805
Centisome position: 24.1
GC content: 28.73
Gene sequence:
>717_bases TTGCTTTTAGGAGGTCAATCTATGTTTAGAGGAAAAGAAATATATTTCTTGTTATTTTCGTTACTTTTGTTTATATCATC AATTATAATTTCTCACGGAATAAAAAACATTGGCACCAAAAATGAAAATTATATTACGGTAAAGGGTCTTAGCGAAAGAG AAATTTTATCAACGTCTTCTAGTTGGGGGCTTAGATACAGCTTAACCGGTAACACTATAAATGATATTAATAAAGCAAAT AATTTAAGCTTATCGAAGATTAAAAGTTTTTTTTTAAAACATGGATTTAGCGAAGACCATATAAAAATGGGATTTATGGA ATTTAATGAAGAGACTTACAAAGAATCTCTTTATAAGTATAGAGCATATATATCTTTAACTGTTCATACAAAAAATATTG AGAAAATGGAAGCAGCAGAAAAAAATATTGCTGAGCTTTATAATCAAGGTATATTAATTAGTAATAGTGGGGGGCCAAGA TATTACTTTGACAATATTAATGATATAAAGCCCGAAATGTTAGCAGATTCAATTAGAAATGCGAAATTAGCGGCTTTGGA ATTTGCAAAACATTCAAGTTCAAAATTGGGGAAAATTAAAAACGCAAATCAAGGATATTTTGAATTTCTTCCAATTGATA GAAGCTTGGGCGATCAAGAACGTTATCCAAAAAAAATATTAAGAATCGTTACAACCGTTTCTTATTATTTGGATTGA
Upstream 100 bases:
>100_bases TAGCAAGGTCATAAAATTATGATCTACTAAAATGTATTCGGATTTATTAATATTAAGCAATATGTTAAAATAAATTTAAA TACAGTAATTTAATATATTA
Downstream 100 bases:
>100_bases TATTTGGCGAACTATTTTTTCTAAAAACCCATATAAATAGCTTGCGGTTTCATACCATGACGCGATCTACACACCTAATT GAAGCATAGCTATATATATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 238; Mature: 238
Protein sequence:
>238_residues MLLGGQSMFRGKEIYFLLFSLLLFISSIIISHGIKNIGTKNENYITVKGLSEREILSTSSSWGLRYSLTGNTINDINKAN NLSLSKIKSFFLKHGFSEDHIKMGFMEFNEETYKESLYKYRAYISLTVHTKNIEKMEAAEKNIAELYNQGILISNSGGPR YYFDNINDIKPEMLADSIRNAKLAALEFAKHSSSKLGKIKNANQGYFEFLPIDRSLGDQERYPKKILRIVTTVSYYLD
Sequences:
>Translated_238_residues MLLGGQSMFRGKEIYFLLFSLLLFISSIIISHGIKNIGTKNENYITVKGLSEREILSTSSSWGLRYSLTGNTINDINKAN NLSLSKIKSFFLKHGFSEDHIKMGFMEFNEETYKESLYKYRAYISLTVHTKNIEKMEAAEKNIAELYNQGILISNSGGPR YYFDNINDIKPEMLADSIRNAKLAALEFAKHSSSKLGKIKNANQGYFEFLPIDRSLGDQERYPKKILRIVTTVSYYLD >Mature_238_residues MLLGGQSMFRGKEIYFLLFSLLLFISSIIISHGIKNIGTKNENYITVKGLSEREILSTSSSWGLRYSLTGNTINDINKAN NLSLSKIKSFFLKHGFSEDHIKMGFMEFNEETYKESLYKYRAYISLTVHTKNIEKMEAAEKNIAELYNQGILISNSGGPR YYFDNINDIKPEMLADSIRNAKLAALEFAKHSSSKLGKIKNANQGYFEFLPIDRSLGDQERYPKKILRIVTTVSYYLD
Specific function: Unknown
COG id: COG2859
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27222; Mature: 27222
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLGGQSMFRGKEIYFLLFSLLLFISSIIISHGIKNIGTKNENYITVKGLSEREILSTSS CCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCEEEEECCCCHHHHCCCC SWGLRYSLTGNTINDINKANNLSLSKIKSFFLKHGFSEDHIKMGFMEFNEETYKESLYKY CCCEEEEECCCCHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEHHHHHCHHHHHHHHHHH RAYISLTVHTKNIEKMEAAEKNIAELYNQGILISNSGGPRYYFDNINDIKPEMLADSIRN EEEEEEEEEECCHHHHHHHHHHHHHHHHCCEEEECCCCCEEEECCCCCCCHHHHHHHHCC AKLAALEFAKHSSSKLGKIKNANQGYFEFLPIDRSLGDQERYPKKILRIVTTVSYYLD CHHHHHHHHHCCCHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLLGGQSMFRGKEIYFLLFSLLLFISSIIISHGIKNIGTKNENYITVKGLSEREILSTSS CCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCEEEEECCCCHHHHCCCC SWGLRYSLTGNTINDINKANNLSLSKIKSFFLKHGFSEDHIKMGFMEFNEETYKESLYKY CCCEEEEECCCCHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEHHHHHCHHHHHHHHHHH RAYISLTVHTKNIEKMEAAEKNIAELYNQGILISNSGGPRYYFDNINDIKPEMLADSIRN EEEEEEEEEECCHHHHHHHHHHHHHHHHCCEEEECCCCCEEEECCCCCCCHHHHHHHHCC AKLAALEFAKHSSSKLGKIKNANQGYFEFLPIDRSLGDQERYPKKILRIVTTVSYYLD CHHHHHHHHHCCCHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA