Definition | Borrelia burgdorferi B31 plasmid lp28-3, complete sequence. |
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Accession | NC_001853 |
Length | 28,601 |
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The map label for this gene is 11496734
Identifier: 11496734
GI number: 11496734
Start: 12105
End: 13220
Strand: Direct
Name: 11496734
Synonym: BBH18
Alternate gene names: NA
Gene position: 12105-13220 (Clockwise)
Preceding gene: 11496733
Following gene: 11496718
Centisome position: 42.32
GC content: 29.51
Gene sequence:
>1116_bases CTGAAAATGAAGGAGAAGCGGGTGGGCAATAAAATTTTTTATATTTCAGTGGTTTTAATTTTAATAGTTGGTTGCGACTG GGGAACTATTAAAGATAAAAGTACAGAAATTTCCAAGCTATTAAGAACGGACAAAGATAAGACTAAAAATCAAGATAGAA TAGAATTGGGTGAAGATAATTTTGTATCTAAAAATAATATGTCTACTACTGATACGGGCATTACTAGTTTAGGAAGTCTA AACAACTTGGATTTAATTAATCGTTCACAGCGGGTCAGTGAACCACCTATAATCTCAAATGAGAAAGCCATAGCTACTCA AGCAAAAGTAGATTTAATGAACAACATTAATGTTACTATAATAAACCCAAAACCAGCTCAAAATTTGGGAAATTCTTTAA ACAATACTACTACTGAAGATAGTGTGAAGTTTTTATCAATTGAAAACCAAGAGTGGCTTATTAGTAAAAAGATTTTGCCC AGTAAGTTGGAAAATTTAGAAAGCTTTCTAAAAACACAACACGAAAAAGAAGCTTTTAAGACGGCTAAAACTATACAAAG TCTCATTAGTAATTCCAATATGGGTAAAGAAATTATTAAGTTTAAGGAAGAATATTACAAACTTTATAATTTGTTTGAAG GCATACAACAAAAATTCCATAGTCAAAGGAATTCATTTATAAAAGATACTAAATTTGGGGAAAATAGACAAAAAAATGCA GTTATATTTAAATCCTTTTCATCTATAGAGAAAGAAATTAGAGATTTGAATTATAAGTTGMGTGAAATCCAAAGTAATTT TCAAATTGCAGATGTTAGCTGGAATAATGCAAACTCTCTTTTAAAAGAATCTATAGAAAAATTAATTCAGGCAATTGAAA AAAGGTATGACAATGAGAGTAGAAAGCAAGGTCAAATTGGTGGACCTGCTAATAGATGGGATAAAAATCAAGCTGACAAT TTTGCTAAGGATGCAAAGTATAAGGCAGAACATTCAGCAAATGATTTGGAAAATGCAGCCAACTATTTTAGATATAGTTG TTCAAATGAAAAAGAAGCTAAAAAGCTATTAGAAGAAATTAAAAAAAGATTTGTACGAATTGGTATTAGCCTATAA
Upstream 100 bases:
>100_bases TTATTAATTACCAAAGATAAGTAAACTTGCAAATAAAACTACACGTATTGAAAGTAGATTTGAAATTTCCATTATATTTA TATATAATGGCACTAAATAT
Downstream 100 bases:
>100_bases GTAAATTTGAATATTTCAATTTTAAGTATTATGCATAAATATTAGTAATAACCTAATATTATGCATAATATTCCAATCTG AGATTTCTCTATATATTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 371; Mature: 371
Protein sequence:
>371_residues MKMKEKRVGNKIFYISVVLILIVGCDWGTIKDKSTEISKLLRTDKDKTKNQDRIELGEDNFVSKNNMSTTDTGITSLGSL NNLDLINRSQRVSEPPIISNEKAIATQAKVDLMNNINVTIINPKPAQNLGNSLNNTTTEDSVKFLSIENQEWLISKKILP SKLENLESFLKTQHEKEAFKTAKTIQSLISNSNMGKEIIKFKEEYYKLYNLFEGIQQKFHSQRNSFIKDTKFGENRQKNA VIFKSFSSIEKEIRDLNYKLXEIQSNFQIADVSWNNANSLLKESIEKLIQAIEKRYDNESRKQGQIGGPANRWDKNQADN FAKDAKYKAEHSANDLENAANYFRYSCSNEKEAKKLLEEIKKRFVRIGISL
Sequences:
>Translated_371_residues MKMKEKRVGNKIFYISVVLILIVGCDWGTIKDKSTEISKLLRTDKDKTKNQDRIELGEDNFVSKNNMSTTDTGITSLGSL NNLDLINRSQRVSEPPIISNEKAIATQAKVDLMNNINVTIINPKPAQNLGNSLNNTTTEDSVKFLSIENQEWLISKKILP SKLENLESFLKTQHEKEAFKTAKTIQSLISNSNMGKEIIKFKEEYYKLYNLFEGIQQKFHSQRNSFIKDTKFGENRQKNA VIFKSFSSIEKEIRDLNYKLXEIQSNFQIADVSWNNANSLLKESIEKLIQAIEKRYDNESRKQGQIGGPANRWDKNQADN FAKDAKYKAEHSANDLENAANYFRYSCSNEKEAKKLLEEIKKRFVRIGISL >Mature_371_residues MKMKEKRVGNKIFYISVVLILIVGCDWGTIKDKSTEISKLLRTDKDKTKNQDRIELGEDNFVSKNNMSTTDTGITSLGSL NNLDLINRSQRVSEPPIISNEKAIATQAKVDLMNNINVTIINPKPAQNLGNSLNNTTTEDSVKFLSIENQEWLISKKILP SKLENLESFLKTQHEKEAFKTAKTIQSLISNSNMGKEIIKFKEEYYKLYNLFEGIQQKFHSQRNSFIKDTKFGENRQKNA VIFKSFSSIEKEIRDLNYKLXEIQSNFQIADVSWNNANSLLKESIEKLIQAIEKRYDNESRKQGQIGGPANRWDKNQADN FAKDAKYKAEHSANDLENAANYFRYSCSNEKEAKKLLEEIKKRFVRIGISL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42571; Mature: 42571
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMKEKRVGNKIFYISVVLILIVGCDWGTIKDKSTEISKLLRTDKDKTKNQDRIELGEDN CCCCHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHCCCCCCEECCCCC FVSKNNMSTTDTGITSLGSLNNLDLINRSQRVSEPPIISNEKAIATQAKVDLMNNINVTI CCCCCCCCCCHHHHHHHCCCCCCHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEE INPKPAQNLGNSLNNTTTEDSVKFLSIENQEWLISKKILPSKLENLESFLKTQHEKEAFK ECCCCHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TAKTIQSLISNSNMGKEIIKFKEEYYKLYNLFEGIQQKFHSQRNSFIKDTKFGENRQKNA HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH VIFKSFSSIEKEIRDLNYKLXEIQSNFQIADVSWNNANSLLKESIEKLIQAIEKRYDNES HHHHHHHHHHHHHHHHCHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCH RKQGQIGGPANRWDKNQADNFAKDAKYKAEHSANDLENAANYFRYSCSNEKEAKKLLEEI HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH KKRFVRIGISL HHHHHHHCCCC >Mature Secondary Structure MKMKEKRVGNKIFYISVVLILIVGCDWGTIKDKSTEISKLLRTDKDKTKNQDRIELGEDN CCCCHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHCCCCCCEECCCCC FVSKNNMSTTDTGITSLGSLNNLDLINRSQRVSEPPIISNEKAIATQAKVDLMNNINVTI CCCCCCCCCCHHHHHHHCCCCCCHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEE INPKPAQNLGNSLNNTTTEDSVKFLSIENQEWLISKKILPSKLENLESFLKTQHEKEAFK ECCCCHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TAKTIQSLISNSNMGKEIIKFKEEYYKLYNLFEGIQQKFHSQRNSFIKDTKFGENRQKNA HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH VIFKSFSSIEKEIRDLNYKLXEIQSNFQIADVSWNNANSLLKESIEKLIQAIEKRYDNES HHHHHHHHHHHHHHHHCHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCH RKQGQIGGPANRWDKNQADNFAKDAKYKAEHSANDLENAANYFRYSCSNEKEAKKLLEEI HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH KKRFVRIGISL HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA