Definition Borrelia burgdorferi B31 plasmid lp28-3, complete sequence.
Accession NC_001853
Length 28,601

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The map label for this gene is 11496734

Identifier: 11496734

GI number: 11496734

Start: 12105

End: 13220

Strand: Direct

Name: 11496734

Synonym: BBH18

Alternate gene names: NA

Gene position: 12105-13220 (Clockwise)

Preceding gene: 11496733

Following gene: 11496718

Centisome position: 42.32

GC content: 29.51

Gene sequence:

>1116_bases
CTGAAAATGAAGGAGAAGCGGGTGGGCAATAAAATTTTTTATATTTCAGTGGTTTTAATTTTAATAGTTGGTTGCGACTG
GGGAACTATTAAAGATAAAAGTACAGAAATTTCCAAGCTATTAAGAACGGACAAAGATAAGACTAAAAATCAAGATAGAA
TAGAATTGGGTGAAGATAATTTTGTATCTAAAAATAATATGTCTACTACTGATACGGGCATTACTAGTTTAGGAAGTCTA
AACAACTTGGATTTAATTAATCGTTCACAGCGGGTCAGTGAACCACCTATAATCTCAAATGAGAAAGCCATAGCTACTCA
AGCAAAAGTAGATTTAATGAACAACATTAATGTTACTATAATAAACCCAAAACCAGCTCAAAATTTGGGAAATTCTTTAA
ACAATACTACTACTGAAGATAGTGTGAAGTTTTTATCAATTGAAAACCAAGAGTGGCTTATTAGTAAAAAGATTTTGCCC
AGTAAGTTGGAAAATTTAGAAAGCTTTCTAAAAACACAACACGAAAAAGAAGCTTTTAAGACGGCTAAAACTATACAAAG
TCTCATTAGTAATTCCAATATGGGTAAAGAAATTATTAAGTTTAAGGAAGAATATTACAAACTTTATAATTTGTTTGAAG
GCATACAACAAAAATTCCATAGTCAAAGGAATTCATTTATAAAAGATACTAAATTTGGGGAAAATAGACAAAAAAATGCA
GTTATATTTAAATCCTTTTCATCTATAGAGAAAGAAATTAGAGATTTGAATTATAAGTTGMGTGAAATCCAAAGTAATTT
TCAAATTGCAGATGTTAGCTGGAATAATGCAAACTCTCTTTTAAAAGAATCTATAGAAAAATTAATTCAGGCAATTGAAA
AAAGGTATGACAATGAGAGTAGAAAGCAAGGTCAAATTGGTGGACCTGCTAATAGATGGGATAAAAATCAAGCTGACAAT
TTTGCTAAGGATGCAAAGTATAAGGCAGAACATTCAGCAAATGATTTGGAAAATGCAGCCAACTATTTTAGATATAGTTG
TTCAAATGAAAAAGAAGCTAAAAAGCTATTAGAAGAAATTAAAAAAAGATTTGTACGAATTGGTATTAGCCTATAA

Upstream 100 bases:

>100_bases
TTATTAATTACCAAAGATAAGTAAACTTGCAAATAAAACTACACGTATTGAAAGTAGATTTGAAATTTCCATTATATTTA
TATATAATGGCACTAAATAT

Downstream 100 bases:

>100_bases
GTAAATTTGAATATTTCAATTTTAAGTATTATGCATAAATATTAGTAATAACCTAATATTATGCATAATATTCCAATCTG
AGATTTCTCTATATATTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MKMKEKRVGNKIFYISVVLILIVGCDWGTIKDKSTEISKLLRTDKDKTKNQDRIELGEDNFVSKNNMSTTDTGITSLGSL
NNLDLINRSQRVSEPPIISNEKAIATQAKVDLMNNINVTIINPKPAQNLGNSLNNTTTEDSVKFLSIENQEWLISKKILP
SKLENLESFLKTQHEKEAFKTAKTIQSLISNSNMGKEIIKFKEEYYKLYNLFEGIQQKFHSQRNSFIKDTKFGENRQKNA
VIFKSFSSIEKEIRDLNYKLXEIQSNFQIADVSWNNANSLLKESIEKLIQAIEKRYDNESRKQGQIGGPANRWDKNQADN
FAKDAKYKAEHSANDLENAANYFRYSCSNEKEAKKLLEEIKKRFVRIGISL

Sequences:

>Translated_371_residues
MKMKEKRVGNKIFYISVVLILIVGCDWGTIKDKSTEISKLLRTDKDKTKNQDRIELGEDNFVSKNNMSTTDTGITSLGSL
NNLDLINRSQRVSEPPIISNEKAIATQAKVDLMNNINVTIINPKPAQNLGNSLNNTTTEDSVKFLSIENQEWLISKKILP
SKLENLESFLKTQHEKEAFKTAKTIQSLISNSNMGKEIIKFKEEYYKLYNLFEGIQQKFHSQRNSFIKDTKFGENRQKNA
VIFKSFSSIEKEIRDLNYKLXEIQSNFQIADVSWNNANSLLKESIEKLIQAIEKRYDNESRKQGQIGGPANRWDKNQADN
FAKDAKYKAEHSANDLENAANYFRYSCSNEKEAKKLLEEIKKRFVRIGISL
>Mature_371_residues
MKMKEKRVGNKIFYISVVLILIVGCDWGTIKDKSTEISKLLRTDKDKTKNQDRIELGEDNFVSKNNMSTTDTGITSLGSL
NNLDLINRSQRVSEPPIISNEKAIATQAKVDLMNNINVTIINPKPAQNLGNSLNNTTTEDSVKFLSIENQEWLISKKILP
SKLENLESFLKTQHEKEAFKTAKTIQSLISNSNMGKEIIKFKEEYYKLYNLFEGIQQKFHSQRNSFIKDTKFGENRQKNA
VIFKSFSSIEKEIRDLNYKLXEIQSNFQIADVSWNNANSLLKESIEKLIQAIEKRYDNESRKQGQIGGPANRWDKNQADN
FAKDAKYKAEHSANDLENAANYFRYSCSNEKEAKKLLEEIKKRFVRIGISL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42571; Mature: 42571

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMKEKRVGNKIFYISVVLILIVGCDWGTIKDKSTEISKLLRTDKDKTKNQDRIELGEDN
CCCCHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHCCCCCCEECCCCC
FVSKNNMSTTDTGITSLGSLNNLDLINRSQRVSEPPIISNEKAIATQAKVDLMNNINVTI
CCCCCCCCCCHHHHHHHCCCCCCHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEE
INPKPAQNLGNSLNNTTTEDSVKFLSIENQEWLISKKILPSKLENLESFLKTQHEKEAFK
ECCCCHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAKTIQSLISNSNMGKEIIKFKEEYYKLYNLFEGIQQKFHSQRNSFIKDTKFGENRQKNA
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH
VIFKSFSSIEKEIRDLNYKLXEIQSNFQIADVSWNNANSLLKESIEKLIQAIEKRYDNES
HHHHHHHHHHHHHHHHCHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCH
RKQGQIGGPANRWDKNQADNFAKDAKYKAEHSANDLENAANYFRYSCSNEKEAKKLLEEI
HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH
KKRFVRIGISL
HHHHHHHCCCC
>Mature Secondary Structure
MKMKEKRVGNKIFYISVVLILIVGCDWGTIKDKSTEISKLLRTDKDKTKNQDRIELGEDN
CCCCHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHCCCCCCEECCCCC
FVSKNNMSTTDTGITSLGSLNNLDLINRSQRVSEPPIISNEKAIATQAKVDLMNNINVTI
CCCCCCCCCCHHHHHHHCCCCCCHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEE
INPKPAQNLGNSLNNTTTEDSVKFLSIENQEWLISKKILPSKLENLESFLKTQHEKEAFK
ECCCCHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAKTIQSLISNSNMGKEIIKFKEEYYKLYNLFEGIQQKFHSQRNSFIKDTKFGENRQKNA
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH
VIFKSFSSIEKEIRDLNYKLXEIQSNFQIADVSWNNANSLLKESIEKLIQAIEKRYDNES
HHHHHHHHHHHHHHHHCHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCH
RKQGQIGGPANRWDKNQADNFAKDAKYKAEHSANDLENAANYFRYSCSNEKEAKKLLEEI
HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH
KKRFVRIGISL
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA