Definition | Borrelia burgdorferi B31 plasmid lp28-3, complete sequence. |
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Accession | NC_001853 |
Length | 28,601 |
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The map label for this gene is 11496730
Identifier: 11496730
GI number: 11496730
Start: 25433
End: 26371
Strand: Reverse
Name: 11496730
Synonym: BBH37
Alternate gene names: NA
Gene position: 26371-25433 (Counterclockwise)
Preceding gene: 11496731
Following gene: 11496729
Centisome position: 92.2
GC content: 29.5
Gene sequence:
>939_bases TTGATTAAGGGAAAGGAGAGTATTTTTATGAAAAAAAAAATGTTTTTATATACATTGTTAACGATAGGATTGATGTCTTG TAATCTAAATTCTAAATTATCTGGTAATAAAGAGGAACAAAAAAATAACAATGATATAAAAGAAGCTTTAAATGGCGTTC AAGAAAATGCTATTAATAATTTATATGGAAATAAAAAAGAAAAAAAAGATTTTATTAAAAATTCGGAAAAATTGAAAGAC AAGGGTTTAGACGTGACCACCCTCCCCTTAGAACCTGTAGTGGCGCCCTCCGTAGAATCTGCGGTGTCTTTAGGAGAATC TAATAATAGGATTGGTATACCAACCATTTCAATTGAGCATAATCAAAAAAAAGAGATAAAAGAAGAGGATTTTTTCCCTT CTACTGAGGAAGAAAAGCAAGCGGATAAAGCAATTAAAGATATAGAGAATCTTATTGGAGAATCTGGATTTCCCGAGTTA ATTGAGAATGTGTGCTCACTTAAACATGAATATACTTTAATAAGAAGTGATTTTTATGATGTGATAACTAAGATTCAGAA TAAAAAAATATCACTAATGAAAAATTCTCATAATAATAGAAATAAAATAAGGGAACTAGTACAATTGCAAAATAATTTAA AGATAGGAGACGAACTTGATAAAATTATGGGTTGCATTGATACTGCAGAACAAGAGATAAGATCTGCCGCTTTCTTTTTT GATGAAGCTAAGGAAAGCTTAAAAGAAGGTATTATTAAAAGATTGGAAAAAAGTAAAAATAGGGCAGCATCACAATTATC TAAAAAGGCTTTAAATAGAGCAGAGGATGCTTTAAGGTGCTTAGAAAATTATTCTTCTAAAAAAGGTGAGGCAATAGGAA GAAGAAGCTTTATAAAAGAAGTTGTTGAACAGGCAAAAAATGCTTTAAGTAAGTCTTAA
Upstream 100 bases:
>100_bases ATTAATTTTATTTATATTTTATTGAAATTCAAACAAAATGATATATAATCTTAATTAATAATTAGTATTAATTAAGAATA ATTATTTGTAATATATATTC
Downstream 100 bases:
>100_bases AATGGAAAAAAAATATATAAATATATTAATATTTAAAATTAGAGTCTTCTTTAAAAGAAGACTCTCTTATATTAGTAATA GTACATAGATTTGTGCTAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MIKGKESIFMKKKMFLYTLLTIGLMSCNLNSKLSGNKEEQKNNNDIKEALNGVQENAINNLYGNKKEKKDFIKNSEKLKD KGLDVTTLPLEPVVAPSVESAVSLGESNNRIGIPTISIEHNQKKEIKEEDFFPSTEEEKQADKAIKDIENLIGESGFPEL IENVCSLKHEYTLIRSDFYDVITKIQNKKISLMKNSHNNRNKIRELVQLQNNLKIGDELDKIMGCIDTAEQEIRSAAFFF DEAKESLKEGIIKRLEKSKNRAASQLSKKALNRAEDALRCLENYSSKKGEAIGRRSFIKEVVEQAKNALSKS
Sequences:
>Translated_312_residues MIKGKESIFMKKKMFLYTLLTIGLMSCNLNSKLSGNKEEQKNNNDIKEALNGVQENAINNLYGNKKEKKDFIKNSEKLKD KGLDVTTLPLEPVVAPSVESAVSLGESNNRIGIPTISIEHNQKKEIKEEDFFPSTEEEKQADKAIKDIENLIGESGFPEL IENVCSLKHEYTLIRSDFYDVITKIQNKKISLMKNSHNNRNKIRELVQLQNNLKIGDELDKIMGCIDTAEQEIRSAAFFF DEAKESLKEGIIKRLEKSKNRAASQLSKKALNRAEDALRCLENYSSKKGEAIGRRSFIKEVVEQAKNALSKS >Mature_312_residues MIKGKESIFMKKKMFLYTLLTIGLMSCNLNSKLSGNKEEQKNNNDIKEALNGVQENAINNLYGNKKEKKDFIKNSEKLKD KGLDVTTLPLEPVVAPSVESAVSLGESNNRIGIPTISIEHNQKKEIKEEDFFPSTEEEKQADKAIKDIENLIGESGFPEL IENVCSLKHEYTLIRSDFYDVITKIQNKKISLMKNSHNNRNKIRELVQLQNNLKIGDELDKIMGCIDTAEQEIRSAAFFF DEAKESLKEGIIKRLEKSKNRAASQLSKKALNRAEDALRCLENYSSKKGEAIGRRSFIKEVVEQAKNALSKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35333; Mature: 35333
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKGKESIFMKKKMFLYTLLTIGLMSCNLNSKLSGNKEEQKNNNDIKEALNGVQENAINN CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHH LYGNKKEKKDFIKNSEKLKDKGLDVTTLPLEPVVAPSVESAVSLGESNNRIGIPTISIEH HHCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHCCCCCEECCCEEEECC NQKKEIKEEDFFPSTEEEKQADKAIKDIENLIGESGFPELIENVCSLKHEYTLIRSDFYD CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH VITKIQNKKISLMKNSHNNRNKIRELVQLQNNLKIGDELDKIMGCIDTAEQEIRSAAFFF HHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH DEAKESLKEGIIKRLEKSKNRAASQLSKKALNRAEDALRCLENYSSKKGEAIGRRSFIKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH VVEQAKNALSKS HHHHHHHHHCCC >Mature Secondary Structure MIKGKESIFMKKKMFLYTLLTIGLMSCNLNSKLSGNKEEQKNNNDIKEALNGVQENAINN CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHH LYGNKKEKKDFIKNSEKLKDKGLDVTTLPLEPVVAPSVESAVSLGESNNRIGIPTISIEH HHCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHCCCCCEECCCEEEECC NQKKEIKEEDFFPSTEEEKQADKAIKDIENLIGESGFPELIENVCSLKHEYTLIRSDFYD CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH VITKIQNKKISLMKNSHNNRNKIRELVQLQNNLKIGDELDKIMGCIDTAEQEIRSAAFFF HHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH DEAKESLKEGIIKRLEKSKNRAASQLSKKALNRAEDALRCLENYSSKKGEAIGRRSFIKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH VVEQAKNALSKS HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA