Definition | Borrelia burgdorferi B31 plasmid lp28-3, complete sequence. |
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Accession | NC_001853 |
Length | 28,601 |
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The map label for this gene is 11496708
Identifier: 11496708
GI number: 11496708
Start: 21470
End: 22219
Strand: Direct
Name: 11496708
Synonym: BBH32
Alternate gene names: NA
Gene position: 21470-22219 (Clockwise)
Preceding gene: 11496725
Following gene: 11496726
Centisome position: 75.07
GC content: 26.53
Gene sequence:
>750_bases ATGAAATATAATACGATTATAAGCATATTTGTTTGTTTGTTTTTAACTGCTTGCAATCCAGATTTTAACACAAATAAGAA AAGAACTCTAAGTAAGGGGATAATTTCAAATCAAGATGCAGATTCTGATAAAATAATAAAAAATAAATTACTTGATGATT TAATAAATTTAATAGAAAAAGCGAATGCAGATAGAGAAAAATATGTAAAAAAAATGGAAGAAGAACCTTCGGATCAATAT GGAATGTTGGCTGTTTTTGGAGGTATGTATTGGGCAGAATCACCACGGGAATTAATATCTGATACAGGTAGTGAGAGATC TATTAGGTATAGAAGGCGTGTTTATAGTATTTTATTAAATGCTATTGAAACTAATGAATTAAAGAAATTTTCAGAAATTA GAATACTGTCAATAAAAGTACTAGAAATATTTAGCCTATTTAATCTATTTGGAAGTACTCTTGATGATGTGGTTGTTCAC TTATATTCCAAAAAAGATACTCTAGGTAAACTAGATATTTCAAATTTAAAAAGACTTAAAAATTTGTTTGAAAAATTATT ATCTATAAAAACAATCGTTTCAAAGATGTCAAAACGTCTTTTATTGGATTATCAAAATAATGAAAATTTTATAAAAACAG ATAACGCCAAGCTTGGATCTTATGTGGTTGCACTTTCCAATCAAATTCAAGAAAAATATAATGAAGCAGAAAGGCTGAAA AGCGAGATAATTTTAATATATACCCTTTAA
Upstream 100 bases:
>100_bases TTGATATTAGATTGATATATTCAATTTTAATATATTGTATTACATAATATTATAGGATATAAAATAATACAATGTAAAAT TTTAAGTAAGGAGAATATTT
Downstream 100 bases:
>100_bases AGGGTATATATATCCACTTTCTGAGTCAATATTGGCATCCTTTCTCTCGGCAGCAGAACTAAATGCTTCACCACCACCAA CGCTCTCCTAATATCAGTTA
Product: antigen, P35, putative
Products: NA
Alternate protein names: Virulent Strain Associated Lipoprotein; Antigen P; Borrelia Virulent Strain Associated Lipoprotein; Surface Protein
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MKYNTIISIFVCLFLTACNPDFNTNKKRTLSKGIISNQDADSDKIIKNKLLDDLINLIEKANADREKYVKKMEEEPSDQY GMLAVFGGMYWAESPRELISDTGSERSIRYRRRVYSILLNAIETNELKKFSEIRILSIKVLEIFSLFNLFGSTLDDVVVH LYSKKDTLGKLDISNLKRLKNLFEKLLSIKTIVSKMSKRLLLDYQNNENFIKTDNAKLGSYVVALSNQIQEKYNEAERLK SEIILIYTL
Sequences:
>Translated_249_residues MKYNTIISIFVCLFLTACNPDFNTNKKRTLSKGIISNQDADSDKIIKNKLLDDLINLIEKANADREKYVKKMEEEPSDQY GMLAVFGGMYWAESPRELISDTGSERSIRYRRRVYSILLNAIETNELKKFSEIRILSIKVLEIFSLFNLFGSTLDDVVVH LYSKKDTLGKLDISNLKRLKNLFEKLLSIKTIVSKMSKRLLLDYQNNENFIKTDNAKLGSYVVALSNQIQEKYNEAERLK SEIILIYTL >Mature_249_residues MKYNTIISIFVCLFLTACNPDFNTNKKRTLSKGIISNQDADSDKIIKNKLLDDLINLIEKANADREKYVKKMEEEPSDQY GMLAVFGGMYWAESPRELISDTGSERSIRYRRRVYSILLNAIETNELKKFSEIRILSIKVLEIFSLFNLFGSTLDDVVVH LYSKKDTLGKLDISNLKRLKNLFEKLLSIKTIVSKMSKRLLLDYQNNENFIKTDNAKLGSYVVALSNQIQEKYNEAERLK SEIILIYTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28805; Mature: 28805
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYNTIISIFVCLFLTACNPDFNTNKKRTLSKGIISNQDADSDKIIKNKLLDDLINLIEK CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH ANADREKYVKKMEEEPSDQYGMLAVFGGMYWAESPRELISDTGSERSIRYRRRVYSILLN CCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHH AIETNELKKFSEIRILSIKVLEIFSLFNLFGSTLDDVVVHLYSKKDTLGKLDISNLKRLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH NLFEKLLSIKTIVSKMSKRLLLDYQNNENFIKTDNAKLGSYVVALSNQIQEKYNEAERLK HHHHHHHHHHHHHHHHHHHHEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH SEIILIYTL HCEEEEEEC >Mature Secondary Structure MKYNTIISIFVCLFLTACNPDFNTNKKRTLSKGIISNQDADSDKIIKNKLLDDLINLIEK CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH ANADREKYVKKMEEEPSDQYGMLAVFGGMYWAESPRELISDTGSERSIRYRRRVYSILLN CCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHH AIETNELKKFSEIRILSIKVLEIFSLFNLFGSTLDDVVVHLYSKKDTLGKLDISNLKRLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH NLFEKLLSIKTIVSKMSKRLLLDYQNNENFIKTDNAKLGSYVVALSNQIQEKYNEAERLK HHHHHHHHHHHHHHHHHHHHEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH SEIILIYTL HCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA