Definition | Borrelia burgdorferi B31 plasmid lp28-3, complete sequence. |
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Accession | NC_001853 |
Length | 28,601 |
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The map label for this gene is 11496698
Identifier: 11496698
GI number: 11496698
Start: 1045
End: 1368
Strand: Direct
Name: 11496698
Synonym: BBH04
Alternate gene names: NA
Gene position: 1045-1368 (Clockwise)
Preceding gene: 11496709
Following gene: 11496703
Centisome position: 3.65
GC content: 23.15
Gene sequence:
>324_bases ATGCCTGCTTTATGTGACAATACATTATTAAATCTAGAATTGAATAATTATTCTCAAAAAAAACTATTAAAATTTTACAA CGAAATTCTTAAAAAAGATAATAAAAATTCTTGCGATCTACCAACAATGAATAAATATCTTGATATATTAGAAAAAACAA AAACCATAGTAAAACTATCTTTTAAAAACCAGTCCAAATATATGATTTATTATAAAATTAATTACCCCCTTAAAGTGTTT CGTTCAACAATACAAGACTACTATCAAACAATAACAGATAAACTAAAACTACGGTTAGAACTAAACTATCCTACTACTAT TTAA
Upstream 100 bases:
>100_bases ACAAGTGCTCAGAAATAGAAAAAACACAATTAGAAATAATAAATAACCAATCAGAAATAGAAAAACAACTCCATCAATTA GAAATTGAGTTTACTGGGGT
Downstream 100 bases:
>100_bases TCGTAAAAAATATTTCTTTGCAAATTAAGCAATTTAGAAATATAAATGTAAAGACATATATTTTTATTTGATAAATAATA AAAATTACTGGGGCACTATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 107; Mature: 106
Protein sequence:
>107_residues MPALCDNTLLNLELNNYSQKKLLKFYNEILKKDNKNSCDLPTMNKYLDILEKTKTIVKLSFKNQSKYMIYYKINYPLKVF RSTIQDYYQTITDKLKLRLELNYPTTI
Sequences:
>Translated_107_residues MPALCDNTLLNLELNNYSQKKLLKFYNEILKKDNKNSCDLPTMNKYLDILEKTKTIVKLSFKNQSKYMIYYKINYPLKVF RSTIQDYYQTITDKLKLRLELNYPTTI >Mature_106_residues PALCDNTLLNLELNNYSQKKLLKFYNEILKKDNKNSCDLPTMNKYLDILEKTKTIVKLSFKNQSKYMIYYKINYPLKVFR STIQDYYQTITDKLKLRLELNYPTTI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12861; Mature: 12730
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPALCDNTLLNLELNNYSQKKLLKFYNEILKKDNKNSCDLPTMNKYLDILEKTKTIVKLS CCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHEEEEE FKNQSKYMIYYKINYPLKVFRSTIQDYYQTITDKLKLRLELNYPTTI ECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCC >Mature Secondary Structure PALCDNTLLNLELNNYSQKKLLKFYNEILKKDNKNSCDLPTMNKYLDILEKTKTIVKLS CCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHEEEEE FKNQSKYMIYYKINYPLKVFRSTIQDYYQTITDKLKLRLELNYPTTI ECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA