Definition | Borrelia burgdorferi B31 plasmid lp28-2, complete sequence. |
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Accession | NC_001852 |
Length | 29,766 |
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The map label for this gene is 11496696
Identifier: 11496696
GI number: 11496696
Start: 28854
End: 29618
Strand: Reverse
Name: 11496696
Synonym: BBG34
Alternate gene names: NA
Gene position: 29618-28854 (Counterclockwise)
Preceding gene: NA
Following gene: 11496694
Centisome position: 99.5
GC content: 26.93
Gene sequence:
>765_bases ATGTTTTTATGCAATTTTTTTTTAAAAGGTAAATTTGCCAAACAAAAAAAAATTTATAAAATAAATCCGAATGAATTTAT TTTAATTAGCGAGAATCTTATTAATTCTTCTAGCACTAAACACCATTTACTTGGAATTATTATGGCTGCTGGAATTCCAT TAACTCATCTGAAAAATCAAAACATAAAAACTCCTTACAATTTCCAATCTGATACAATTTCTTATACATTGGACAGCGGT TTACAAATTCAAACACATTCCCTAATTTGCTCTAATAAAATTTCCAGATGTATTGAAAATCTAGACAAAAATAGATTGAT ATCTATTAATACAACCAGAATTAATTATGTGGCAAAAAAGATATTTGGTTTTGACATTACTACTAAACAACTGAGAATTG TTTACTCTTTGATTGCAAAGTCTAAAGAAACACCAAATGAAGTTAGGCACAACTCTAATTCACAAAGCATCTTTTTAGTT AACACGCCGTGCATATTAAATCTATCACAAAAGCTTAACTATATTAAATCATTTGCACCTTTAAAGCTCAATCAAAACAA TCTGAATTATTATAAAAACAGCTCCAACGAGCTTAAATCTACTATTACAAACTTGATTTCAAATTTTATTGCTGAAAAGG AACCTTGCAAAAATTTACATACTCTAACGCTATACATTAATGCTAACCTAAAAAAACTGGGAATCTACAAAAATACTTGC AAATTACAAAAGCGCATTATATCTAAAATTTTTTTTCTTGATTAA
Upstream 100 bases:
>100_bases AATTTTTAATTTAGATGTTTCATGAATACCAAATCTTATCTCCAAATTACAAATTTATAACTTCTTTTGAAATTCTTACA AAAAAGTATATAATGTTTAT
Downstream 100 bases:
>100_bases AGTAAAGAATTCTTTGCAATTTCTATTTGAAATAATTGCTAATTAATGACGTAATGAAGGGAGTTAGAATAGATATAGCA GTGGGCACAACTACTACTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MFLCNFFLKGKFAKQKKIYKINPNEFILISENLINSSSTKHHLLGIIMAAGIPLTHLKNQNIKTPYNFQSDTISYTLDSG LQIQTHSLICSNKISRCIENLDKNRLISINTTRINYVAKKIFGFDITTKQLRIVYSLIAKSKETPNEVRHNSNSQSIFLV NTPCILNLSQKLNYIKSFAPLKLNQNNLNYYKNSSNELKSTITNLISNFIAEKEPCKNLHTLTLYINANLKKLGIYKNTC KLQKRIISKIFFLD
Sequences:
>Translated_254_residues MFLCNFFLKGKFAKQKKIYKINPNEFILISENLINSSSTKHHLLGIIMAAGIPLTHLKNQNIKTPYNFQSDTISYTLDSG LQIQTHSLICSNKISRCIENLDKNRLISINTTRINYVAKKIFGFDITTKQLRIVYSLIAKSKETPNEVRHNSNSQSIFLV NTPCILNLSQKLNYIKSFAPLKLNQNNLNYYKNSSNELKSTITNLISNFIAEKEPCKNLHTLTLYINANLKKLGIYKNTC KLQKRIISKIFFLD >Mature_254_residues MFLCNFFLKGKFAKQKKIYKINPNEFILISENLINSSSTKHHLLGIIMAAGIPLTHLKNQNIKTPYNFQSDTISYTLDSG LQIQTHSLICSNKISRCIENLDKNRLISINTTRINYVAKKIFGFDITTKQLRIVYSLIAKSKETPNEVRHNSNSQSIFLV NTPCILNLSQKLNYIKSFAPLKLNQNNLNYYKNSSNELKSTITNLISNFIAEKEPCKNLHTLTLYINANLKKLGIYKNTC KLQKRIISKIFFLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29187; Mature: 29187
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLCNFFLKGKFAKQKKIYKINPNEFILISENLINSSSTKHHLLGIIMAAGIPLTHLKNQ CEEEEEECCCCCCCCCEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHCCCC NIKTPYNFQSDTISYTLDSGLQIQTHSLICSNKISRCIENLDKNRLISINTTRINYVAKK CCCCCCCCCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHH IFGFDITTKQLRIVYSLIAKSKETPNEVRHNSNSQSIFLVNTPCILNLSQKLNYIKSFAP HHCCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCCEEEEEECCEEEEHHHHHHHHHHCCC LKLNQNNLNYYKNSSNELKSTITNLISNFIAEKEPCKNLHTLTLYINANLKKLGIYKNTC EEECCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCEEECEEHHHH KLQKRIISKIFFLD HHHHHHHHHHHCCC >Mature Secondary Structure MFLCNFFLKGKFAKQKKIYKINPNEFILISENLINSSSTKHHLLGIIMAAGIPLTHLKNQ CEEEEEECCCCCCCCCEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHCCCC NIKTPYNFQSDTISYTLDSGLQIQTHSLICSNKISRCIENLDKNRLISINTTRINYVAKK CCCCCCCCCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHH IFGFDITTKQLRIVYSLIAKSKETPNEVRHNSNSQSIFLVNTPCILNLSQKLNYIKSFAP HHCCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCCEEEEEECCEEEEHHHHHHHHHHCCC LKLNQNNLNYYKNSSNELKSTITNLISNFIAEKEPCKNLHTLTLYINANLKKLGIYKNTC EEECCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCEEECEEHHHH KLQKRIISKIFFLD HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA