Definition | Borrelia burgdorferi B31 plasmid lp17, complete sequence. |
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Accession | NC_001849 |
Length | 16,823 |
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The map label for this gene is 11496588
Identifier: 11496588
GI number: 11496588
Start: 10986
End: 11648
Strand: Reverse
Name: 11496588
Synonym: BBD18
Alternate gene names: NA
Gene position: 11648-10986 (Counterclockwise)
Preceding gene: 11496597
Following gene: 11496603
Centisome position: 69.24
GC content: 27.3
Gene sequence:
>663_bases ATGCAAAAAGAAATAACAATAAACTATAATGAATATACAATTGGGGGCATAAAAGGAACTTTCTTTGGAAATTCTCAATA TGAAGCTAATTATCGAGCAAAAATAAATGGCTTTATAATTGACTTTTTTAAAATTCCCATAAGTTTAAAGAAAAAATATG AACTTAATATTAAAGCCCTTAGTGATCCTAATTTTTCATCCACAAATATTGCAATGAATTGCATAAATACTTTCAAGCTT ATAGTTGATATTGTTAATATGCAAACCGGTGAAAATTACGATTATGACACATTTATTACCAAAACAGACACAGAAAAAAT GCTTAAATATGGAACAAAAATAATTGCCGCACTAGCAAGGCACTTCGACGAACAAAACAAAACCAACTTTAATGAAAGCT ATTATGAATGGGAAAAAGGCTGGATAGATAAAAAATGGATAAATTATGAACCAACTGCAGAAGAAATTAAAGAAATTCAA ATAATGAATCAAAAATTAAATCCTTTAAAACTCAAACATAGAAAAAAAAACCTTAATAACGGCCAAATAAGGCTTTTACA AGCCATCAATAAAATTGAAGATCAATCACAACAACAGGCTACTAAATCAAATAGCAAAACTAAAAAATTAAAAGGAAATC ATGGGGAAAAAACCAAAATTTAA
Upstream 100 bases:
>100_bases ATTAAAAATATTTTTTTTATTTATACTATGTATTAATTGATATATAATATCAATTAATACATAGTATTATATTATATTAA TATATTTTTAAAGGATAAAA
Downstream 100 bases:
>100_bases CATTTTACTTAAAAGCGTTTAATTTTATTTATTATTATTAAATAATATTTACAAAATTAAAAAAATAAAATATTATATAT GTAAGGTAGAAAACGATCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 220
Protein sequence:
>220_residues MQKEITINYNEYTIGGIKGTFFGNSQYEANYRAKINGFIIDFFKIPISLKKKYELNIKALSDPNFSSTNIAMNCINTFKL IVDIVNMQTGENYDYDTFITKTDTEKMLKYGTKIIAALARHFDEQNKTNFNESYYEWEKGWIDKKWINYEPTAEEIKEIQ IMNQKLNPLKLKHRKKNLNNGQIRLLQAINKIEDQSQQQATKSNSKTKKLKGNHGEKTKI
Sequences:
>Translated_220_residues MQKEITINYNEYTIGGIKGTFFGNSQYEANYRAKINGFIIDFFKIPISLKKKYELNIKALSDPNFSSTNIAMNCINTFKL IVDIVNMQTGENYDYDTFITKTDTEKMLKYGTKIIAALARHFDEQNKTNFNESYYEWEKGWIDKKWINYEPTAEEIKEIQ IMNQKLNPLKLKHRKKNLNNGQIRLLQAINKIEDQSQQQATKSNSKTKKLKGNHGEKTKI >Mature_220_residues MQKEITINYNEYTIGGIKGTFFGNSQYEANYRAKINGFIIDFFKIPISLKKKYELNIKALSDPNFSSTNIAMNCINTFKL IVDIVNMQTGENYDYDTFITKTDTEKMLKYGTKIIAALARHFDEQNKTNFNESYYEWEKGWIDKKWINYEPTAEEIKEIQ IMNQKLNPLKLKHRKKNLNNGQIRLLQAINKIEDQSQQQATKSNSKTKKLKGNHGEKTKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2818_BORBU (P70842)
Other databases:
- EMBL: U43414 - EMBL: AE000793 - PIR: F70223 - RefSeq: NP_045402.1 - RefSeq: NP_862713.1 - EnsemblBacteria: EBBORT00000009627 - GeneID: 1194015 - GeneID: 4594766 - GenomeReviews: AE000793_GR - KEGG: bbu:BBD18 - NMPDR: fig|224326.1.peg.1253 - TIGR: BB_D18 - GeneTree: EBGT00050000007003 - HOGENOM: HBG037335 - OMA: IKEIQTM - ProtClustDB: CLSK541091 - BioCyc: BBUR224326:BB_D18-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25730; Mature: 25730
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKEITINYNEYTIGGIKGTFFGNSQYEANYRAKINGFIIDFFKIPISLKKKYELNIKAL CCCEEEEECCEEEECCEEEEEECCCCCCCCEEEEECEEEEEEEECCEEECEEEEEEEEEE SDPNFSSTNIAMNCINTFKLIVDIVNMQTGENYDYDTFITKTDTEKMLKYGTKIIAALAR CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHH HFDEQNKTNFNESYYEWEKGWIDKKWINYEPTAEEIKEIQIMNQKLNPLKLKHRKKNLNN HHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCC GQIRLLQAINKIEDQSQQQATKSNSKTKKLKGNHGEKTKI CHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCC >Mature Secondary Structure MQKEITINYNEYTIGGIKGTFFGNSQYEANYRAKINGFIIDFFKIPISLKKKYELNIKAL CCCEEEEECCEEEECCEEEEEECCCCCCCCEEEEECEEEEEEEECCEEECEEEEEEEEEE SDPNFSSTNIAMNCINTFKLIVDIVNMQTGENYDYDTFITKTDTEKMLKYGTKIIAALAR CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHH HFDEQNKTNFNESYYEWEKGWIDKKWINYEPTAEEIKEIQIMNQKLNPLKLKHRKKNLNN HHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCC GQIRLLQAINKIEDQSQQQATKSNSKTKKLKGNHGEKTKI CHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8932323; 9403685