Definition Borrelia burgdorferi B31 plasmid lp17, complete sequence.
Accession NC_001849
Length 16,823

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The map label for this gene is 11496588

Identifier: 11496588

GI number: 11496588

Start: 10986

End: 11648

Strand: Reverse

Name: 11496588

Synonym: BBD18

Alternate gene names: NA

Gene position: 11648-10986 (Counterclockwise)

Preceding gene: 11496597

Following gene: 11496603

Centisome position: 69.24

GC content: 27.3

Gene sequence:

>663_bases
ATGCAAAAAGAAATAACAATAAACTATAATGAATATACAATTGGGGGCATAAAAGGAACTTTCTTTGGAAATTCTCAATA
TGAAGCTAATTATCGAGCAAAAATAAATGGCTTTATAATTGACTTTTTTAAAATTCCCATAAGTTTAAAGAAAAAATATG
AACTTAATATTAAAGCCCTTAGTGATCCTAATTTTTCATCCACAAATATTGCAATGAATTGCATAAATACTTTCAAGCTT
ATAGTTGATATTGTTAATATGCAAACCGGTGAAAATTACGATTATGACACATTTATTACCAAAACAGACACAGAAAAAAT
GCTTAAATATGGAACAAAAATAATTGCCGCACTAGCAAGGCACTTCGACGAACAAAACAAAACCAACTTTAATGAAAGCT
ATTATGAATGGGAAAAAGGCTGGATAGATAAAAAATGGATAAATTATGAACCAACTGCAGAAGAAATTAAAGAAATTCAA
ATAATGAATCAAAAATTAAATCCTTTAAAACTCAAACATAGAAAAAAAAACCTTAATAACGGCCAAATAAGGCTTTTACA
AGCCATCAATAAAATTGAAGATCAATCACAACAACAGGCTACTAAATCAAATAGCAAAACTAAAAAATTAAAAGGAAATC
ATGGGGAAAAAACCAAAATTTAA

Upstream 100 bases:

>100_bases
ATTAAAAATATTTTTTTTATTTATACTATGTATTAATTGATATATAATATCAATTAATACATAGTATTATATTATATTAA
TATATTTTTAAAGGATAAAA

Downstream 100 bases:

>100_bases
CATTTTACTTAAAAGCGTTTAATTTTATTTATTATTATTAAATAATATTTACAAAATTAAAAAAATAAAATATTATATAT
GTAAGGTAGAAAACGATCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MQKEITINYNEYTIGGIKGTFFGNSQYEANYRAKINGFIIDFFKIPISLKKKYELNIKALSDPNFSSTNIAMNCINTFKL
IVDIVNMQTGENYDYDTFITKTDTEKMLKYGTKIIAALARHFDEQNKTNFNESYYEWEKGWIDKKWINYEPTAEEIKEIQ
IMNQKLNPLKLKHRKKNLNNGQIRLLQAINKIEDQSQQQATKSNSKTKKLKGNHGEKTKI

Sequences:

>Translated_220_residues
MQKEITINYNEYTIGGIKGTFFGNSQYEANYRAKINGFIIDFFKIPISLKKKYELNIKALSDPNFSSTNIAMNCINTFKL
IVDIVNMQTGENYDYDTFITKTDTEKMLKYGTKIIAALARHFDEQNKTNFNESYYEWEKGWIDKKWINYEPTAEEIKEIQ
IMNQKLNPLKLKHRKKNLNNGQIRLLQAINKIEDQSQQQATKSNSKTKKLKGNHGEKTKI
>Mature_220_residues
MQKEITINYNEYTIGGIKGTFFGNSQYEANYRAKINGFIIDFFKIPISLKKKYELNIKALSDPNFSSTNIAMNCINTFKL
IVDIVNMQTGENYDYDTFITKTDTEKMLKYGTKIIAALARHFDEQNKTNFNESYYEWEKGWIDKKWINYEPTAEEIKEIQ
IMNQKLNPLKLKHRKKNLNNGQIRLLQAINKIEDQSQQQATKSNSKTKKLKGNHGEKTKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2818_BORBU (P70842)

Other databases:

- EMBL:   U43414
- EMBL:   AE000793
- PIR:   F70223
- RefSeq:   NP_045402.1
- RefSeq:   NP_862713.1
- EnsemblBacteria:   EBBORT00000009627
- GeneID:   1194015
- GeneID:   4594766
- GenomeReviews:   AE000793_GR
- KEGG:   bbu:BBD18
- NMPDR:   fig|224326.1.peg.1253
- TIGR:   BB_D18
- GeneTree:   EBGT00050000007003
- HOGENOM:   HBG037335
- OMA:   IKEIQTM
- ProtClustDB:   CLSK541091
- BioCyc:   BBUR224326:BB_D18-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25730; Mature: 25730

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKEITINYNEYTIGGIKGTFFGNSQYEANYRAKINGFIIDFFKIPISLKKKYELNIKAL
CCCEEEEECCEEEECCEEEEEECCCCCCCCEEEEECEEEEEEEECCEEECEEEEEEEEEE
SDPNFSSTNIAMNCINTFKLIVDIVNMQTGENYDYDTFITKTDTEKMLKYGTKIIAALAR
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHH
HFDEQNKTNFNESYYEWEKGWIDKKWINYEPTAEEIKEIQIMNQKLNPLKLKHRKKNLNN
HHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCC
GQIRLLQAINKIEDQSQQQATKSNSKTKKLKGNHGEKTKI
CHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCC
>Mature Secondary Structure
MQKEITINYNEYTIGGIKGTFFGNSQYEANYRAKINGFIIDFFKIPISLKKKYELNIKAL
CCCEEEEECCEEEECCEEEEEECCCCCCCCEEEEECEEEEEEEECCEEECEEEEEEEEEE
SDPNFSSTNIAMNCINTFKLIVDIVNMQTGENYDYDTFITKTDTEKMLKYGTKIIAALAR
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHH
HFDEQNKTNFNESYYEWEKGWIDKKWINYEPTAEEIKEIQIMNQKLNPLKLKHRKKNLNN
HHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCC
GQIRLLQAINKIEDQSQQQATKSNSKTKKLKGNHGEKTKI
CHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8932323; 9403685