Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
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Accession | NC_008358 |
Length | 3,705,021 |
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The map label for this gene is 114800299
Identifier: 114800299
GI number: 114800299
Start: 254559
End: 255407
Strand: Direct
Name: 114800299
Synonym: HNE_0267
Alternate gene names: NA
Gene position: 254559-255407 (Clockwise)
Preceding gene: 114797786
Following gene: 114798179
Centisome position: 6.87
GC content: 56.07
Gene sequence:
>849_bases ATGGCCTTTCAGCCGGTCGTTCCTTTGTCAGGGATCGGAGGATGGAAATTCCTCCAGGCAACCTATGACAAGCAGCTGGA GAGTTACACGAACTCCCCGCAGGTCCGGAACGACCGGGACTATATGATCGAGAAGTTCGCCCAGCCCATTTCTGTGGAGG ATTTTCTCAAGGACTCGCGGCTGGTCCGCGTAACCATGACCGCATTCGACCTCGCCGGCGAGGAATGGAAGAAAGGCTTT ATCAAGAAGACGCTTGAAGAGGTCTCCGATCCTGAAAGCACCTTTCTCGCCCGACTCAACAACCCGAAATACACGGCGCT CGCAAATGCGCTGAAGCCGGTCAACGATACCATCTCGCTTGACGTGGATGACATTGCCGCGATGGCGGTCCGCTTTGAGT CAAACTCGTTCGAGATCGCGGTTGGCGATGTGGACGATTCCATGCGCCTCTCTCTGAACTACAAATCCGAAATAAACACG ATTGTCGGCAGCGGCGCGAACGAGGATTCGATCGCGTATCGTCTGATGGCTGATATTCCGGCCTATACGGTCGTGAGATC GGCGCTCAATCTGCCGTCGGACATGTCAAACCTTCCTGTCGAGCGGCAGGCTGAAATGATCAAGGACGGCCTCAAAAAGG CGCTCGGCGTTTCCAAGCTGTCAGAAATCTCCTCGCCTGAAGCGGTCGACAAGATGATTGTCCGCTATCATGCCATGAAG TCGATCTCGGAAGGGGCGGCGGCCTATTCGCCTGCCTCTGCGGCGCTGATCCTTCTGGGTGGCGGTGACAGCAGCTATGG CTATGGCAGCGGCGCCAGCCAGAATCTCTTTCTCTCCAGCTTCCTCTGA
Upstream 100 bases:
>100_bases TATTATTCTGCCCTCTGCCATCTGCGCCAGATCCTTTCGATCGAAGAAGAACTCCTTGCGATGCGCGGGGCGACCCCTCC GGAAAGCAAGGTCGCCTGAC
Downstream 100 bases:
>100_bases TCCAGCCTAGCTGCGCGGGCGCGGCGGCGGCCGGGTGACCGGCTGCCCGGCGGCAGGCTGGGGCGTCTCTGCCGGTGGCG CGCCGGGGGCAGGAAACGTT
Product: putative flagellar protein
Products: NA
Alternate protein names: Flagellar Basal-Body Rod Protein FlgF; Flagellar Basal-Body Rod Protein
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MAFQPVVPLSGIGGWKFLQATYDKQLESYTNSPQVRNDRDYMIEKFAQPISVEDFLKDSRLVRVTMTAFDLAGEEWKKGF IKKTLEEVSDPESTFLARLNNPKYTALANALKPVNDTISLDVDDIAAMAVRFESNSFEIAVGDVDDSMRLSLNYKSEINT IVGSGANEDSIAYRLMADIPAYTVVRSALNLPSDMSNLPVERQAEMIKDGLKKALGVSKLSEISSPEAVDKMIVRYHAMK SISEGAAAYSPASAALILLGGGDSSYGYGSGASQNLFLSSFL
Sequences:
>Translated_282_residues MAFQPVVPLSGIGGWKFLQATYDKQLESYTNSPQVRNDRDYMIEKFAQPISVEDFLKDSRLVRVTMTAFDLAGEEWKKGF IKKTLEEVSDPESTFLARLNNPKYTALANALKPVNDTISLDVDDIAAMAVRFESNSFEIAVGDVDDSMRLSLNYKSEINT IVGSGANEDSIAYRLMADIPAYTVVRSALNLPSDMSNLPVERQAEMIKDGLKKALGVSKLSEISSPEAVDKMIVRYHAMK SISEGAAAYSPASAALILLGGGDSSYGYGSGASQNLFLSSFL >Mature_281_residues AFQPVVPLSGIGGWKFLQATYDKQLESYTNSPQVRNDRDYMIEKFAQPISVEDFLKDSRLVRVTMTAFDLAGEEWKKGFI KKTLEEVSDPESTFLARLNNPKYTALANALKPVNDTISLDVDDIAAMAVRFESNSFEIAVGDVDDSMRLSLNYKSEINTI VGSGANEDSIAYRLMADIPAYTVVRSALNLPSDMSNLPVERQAEMIKDGLKKALGVSKLSEISSPEAVDKMIVRYHAMKS ISEGAAAYSPASAALILLGGGDSSYGYGSGASQNLFLSSFL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30771; Mature: 30640
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFQPVVPLSGIGGWKFLQATYDKQLESYTNSPQVRNDRDYMIEKFAQPISVEDFLKDSR CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHCCCC LVRVTMTAFDLAGEEWKKGFIKKTLEEVSDPESTFLARLNNPKYTALANALKPVNDTISL EEEEEEHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHCCCCCEEEE DVDDIAAMAVRFESNSFEIAVGDVDDSMRLSLNYKSEINTIVGSGANEDSIAYRLMADIP CHHHHHHHHEEEECCCEEEEEECCCCCEEEEEECHHHHHHHHCCCCCCCHHHHHHHHHCC AYTVVRSALNLPSDMSNLPVERQAEMIKDGLKKALGVSKLSEISSPEAVDKMIVRYHAMK HHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH SISEGAAAYSPASAALILLGGGDSSYGYGSGASQNLFLSSFL HHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHCC >Mature Secondary Structure AFQPVVPLSGIGGWKFLQATYDKQLESYTNSPQVRNDRDYMIEKFAQPISVEDFLKDSR CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHCCCC LVRVTMTAFDLAGEEWKKGFIKKTLEEVSDPESTFLARLNNPKYTALANALKPVNDTISL EEEEEEHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHCCCCCEEEE DVDDIAAMAVRFESNSFEIAVGDVDDSMRLSLNYKSEINTIVGSGANEDSIAYRLMADIP CHHHHHHHHEEEECCCEEEEEECCCCCEEEEEECHHHHHHHHCCCCCCCHHHHHHHHHCC AYTVVRSALNLPSDMSNLPVERQAEMIKDGLKKALGVSKLSEISSPEAVDKMIVRYHAMK HHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH SISEGAAAYSPASAALILLGGGDSSYGYGSGASQNLFLSSFL HHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA