Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

Click here to switch to the map view.

The map label for this gene is 114800299

Identifier: 114800299

GI number: 114800299

Start: 254559

End: 255407

Strand: Direct

Name: 114800299

Synonym: HNE_0267

Alternate gene names: NA

Gene position: 254559-255407 (Clockwise)

Preceding gene: 114797786

Following gene: 114798179

Centisome position: 6.87

GC content: 56.07

Gene sequence:

>849_bases
ATGGCCTTTCAGCCGGTCGTTCCTTTGTCAGGGATCGGAGGATGGAAATTCCTCCAGGCAACCTATGACAAGCAGCTGGA
GAGTTACACGAACTCCCCGCAGGTCCGGAACGACCGGGACTATATGATCGAGAAGTTCGCCCAGCCCATTTCTGTGGAGG
ATTTTCTCAAGGACTCGCGGCTGGTCCGCGTAACCATGACCGCATTCGACCTCGCCGGCGAGGAATGGAAGAAAGGCTTT
ATCAAGAAGACGCTTGAAGAGGTCTCCGATCCTGAAAGCACCTTTCTCGCCCGACTCAACAACCCGAAATACACGGCGCT
CGCAAATGCGCTGAAGCCGGTCAACGATACCATCTCGCTTGACGTGGATGACATTGCCGCGATGGCGGTCCGCTTTGAGT
CAAACTCGTTCGAGATCGCGGTTGGCGATGTGGACGATTCCATGCGCCTCTCTCTGAACTACAAATCCGAAATAAACACG
ATTGTCGGCAGCGGCGCGAACGAGGATTCGATCGCGTATCGTCTGATGGCTGATATTCCGGCCTATACGGTCGTGAGATC
GGCGCTCAATCTGCCGTCGGACATGTCAAACCTTCCTGTCGAGCGGCAGGCTGAAATGATCAAGGACGGCCTCAAAAAGG
CGCTCGGCGTTTCCAAGCTGTCAGAAATCTCCTCGCCTGAAGCGGTCGACAAGATGATTGTCCGCTATCATGCCATGAAG
TCGATCTCGGAAGGGGCGGCGGCCTATTCGCCTGCCTCTGCGGCGCTGATCCTTCTGGGTGGCGGTGACAGCAGCTATGG
CTATGGCAGCGGCGCCAGCCAGAATCTCTTTCTCTCCAGCTTCCTCTGA

Upstream 100 bases:

>100_bases
TATTATTCTGCCCTCTGCCATCTGCGCCAGATCCTTTCGATCGAAGAAGAACTCCTTGCGATGCGCGGGGCGACCCCTCC
GGAAAGCAAGGTCGCCTGAC

Downstream 100 bases:

>100_bases
TCCAGCCTAGCTGCGCGGGCGCGGCGGCGGCCGGGTGACCGGCTGCCCGGCGGCAGGCTGGGGCGTCTCTGCCGGTGGCG
CGCCGGGGGCAGGAAACGTT

Product: putative flagellar protein

Products: NA

Alternate protein names: Flagellar Basal-Body Rod Protein FlgF; Flagellar Basal-Body Rod Protein

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MAFQPVVPLSGIGGWKFLQATYDKQLESYTNSPQVRNDRDYMIEKFAQPISVEDFLKDSRLVRVTMTAFDLAGEEWKKGF
IKKTLEEVSDPESTFLARLNNPKYTALANALKPVNDTISLDVDDIAAMAVRFESNSFEIAVGDVDDSMRLSLNYKSEINT
IVGSGANEDSIAYRLMADIPAYTVVRSALNLPSDMSNLPVERQAEMIKDGLKKALGVSKLSEISSPEAVDKMIVRYHAMK
SISEGAAAYSPASAALILLGGGDSSYGYGSGASQNLFLSSFL

Sequences:

>Translated_282_residues
MAFQPVVPLSGIGGWKFLQATYDKQLESYTNSPQVRNDRDYMIEKFAQPISVEDFLKDSRLVRVTMTAFDLAGEEWKKGF
IKKTLEEVSDPESTFLARLNNPKYTALANALKPVNDTISLDVDDIAAMAVRFESNSFEIAVGDVDDSMRLSLNYKSEINT
IVGSGANEDSIAYRLMADIPAYTVVRSALNLPSDMSNLPVERQAEMIKDGLKKALGVSKLSEISSPEAVDKMIVRYHAMK
SISEGAAAYSPASAALILLGGGDSSYGYGSGASQNLFLSSFL
>Mature_281_residues
AFQPVVPLSGIGGWKFLQATYDKQLESYTNSPQVRNDRDYMIEKFAQPISVEDFLKDSRLVRVTMTAFDLAGEEWKKGFI
KKTLEEVSDPESTFLARLNNPKYTALANALKPVNDTISLDVDDIAAMAVRFESNSFEIAVGDVDDSMRLSLNYKSEINTI
VGSGANEDSIAYRLMADIPAYTVVRSALNLPSDMSNLPVERQAEMIKDGLKKALGVSKLSEISSPEAVDKMIVRYHAMKS
ISEGAAAYSPASAALILLGGGDSSYGYGSGASQNLFLSSFL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30771; Mature: 30640

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFQPVVPLSGIGGWKFLQATYDKQLESYTNSPQVRNDRDYMIEKFAQPISVEDFLKDSR
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHCCCC
LVRVTMTAFDLAGEEWKKGFIKKTLEEVSDPESTFLARLNNPKYTALANALKPVNDTISL
EEEEEEHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHCCCCCEEEE
DVDDIAAMAVRFESNSFEIAVGDVDDSMRLSLNYKSEINTIVGSGANEDSIAYRLMADIP
CHHHHHHHHEEEECCCEEEEEECCCCCEEEEEECHHHHHHHHCCCCCCCHHHHHHHHHCC
AYTVVRSALNLPSDMSNLPVERQAEMIKDGLKKALGVSKLSEISSPEAVDKMIVRYHAMK
HHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
SISEGAAAYSPASAALILLGGGDSSYGYGSGASQNLFLSSFL
HHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHCC
>Mature Secondary Structure 
AFQPVVPLSGIGGWKFLQATYDKQLESYTNSPQVRNDRDYMIEKFAQPISVEDFLKDSR
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHCCCC
LVRVTMTAFDLAGEEWKKGFIKKTLEEVSDPESTFLARLNNPKYTALANALKPVNDTISL
EEEEEEHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHCCCCCEEEE
DVDDIAAMAVRFESNSFEIAVGDVDDSMRLSLNYKSEINTIVGSGANEDSIAYRLMADIP
CHHHHHHHHEEEECCCEEEEEECCCCCEEEEEECHHHHHHHHCCCCCCCHHHHHHHHHCC
AYTVVRSALNLPSDMSNLPVERQAEMIKDGLKKALGVSKLSEISSPEAVDKMIVRYHAMK
HHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
SISEGAAAYSPASAALILLGGGDSSYGYGSGASQNLFLSSFL
HHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA