Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
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Accession | NC_008358 |
Length | 3,705,021 |
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The map label for this gene is ydbL [C]
Identifier: 114800201
GI number: 114800201
Start: 640879
End: 641229
Strand: Direct
Name: ydbL [C]
Synonym: HNE_0636
Alternate gene names: 114800201
Gene position: 640879-641229 (Clockwise)
Preceding gene: 114799667
Following gene: 114797645
Centisome position: 17.3
GC content: 60.97
Gene sequence:
>351_bases ATGACCACTATTCGTACTCTGATCCTTGGCCTGGTCCTGATGTTCGGCGGCGTTGCCGTCACGCAGGCCTCTGCGCAGGG CAACTCGCAGATCGAGACGGCCCGTTCCACAGGCGTCATCGGTGAGCGCATCGACGGCTATCTCGGCGTGGTCGGCTCCG CTGACGCTGAAATTGTCCGGCAGGTGCAGGACATCAACAACCGCCGCCGCGCGCTCTATGAAAAGACCGCTGGCGAAACC GGAACGACCGTTCAACAGGTCGCCCGCATCGCCGGTGAGAAACAACTCGCCGAACGCGTGAAACCCGGTGAGTATTACAT GGACGCCACCGGCAGCTGGAAACAGAAATAG
Upstream 100 bases:
>100_bases CACGCAGGAAGTGCGCATCAAGCTGGACCGTGAAGTCACGGACCTGATCGCGGACAACCCTGACCTGTTCTGATTGCCTG GGTCCCTAGGGGAGACACAC
Downstream 100 bases:
>100_bases GCTTCGGCCTGAATTGGACCCCGGATAGGCACGCCCTGTCCGGGGTTTGTTGTTTCTTAGTCCTTCCCTGACCGCCCGGC GGCCCTAACTGTCCCAATCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MTTIRTLILGLVLMFGGVAVTQASAQGNSQIETARSTGVIGERIDGYLGVVGSADAEIVRQVQDINNRRRALYEKTAGET GTTVQQVARIAGEKQLAERVKPGEYYMDATGSWKQK
Sequences:
>Translated_116_residues MTTIRTLILGLVLMFGGVAVTQASAQGNSQIETARSTGVIGERIDGYLGVVGSADAEIVRQVQDINNRRRALYEKTAGET GTTVQQVARIAGEKQLAERVKPGEYYMDATGSWKQK >Mature_115_residues TTIRTLILGLVLMFGGVAVTQASAQGNSQIETARSTGVIGERIDGYLGVVGSADAEIVRQVQDINNRRRALYEKTAGETG TTVQQVARIAGEKQLAERVKPGEYYMDATGSWKQK
Specific function: Unknown
COG id: COG3784
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081895, Length=86, Percent_Identity=40.6976744186046, Blast_Score=64, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12517; Mature: 12386
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTIRTLILGLVLMFGGVAVTQASAQGNSQIETARSTGVIGERIDGYLGVVGSADAEIVR CHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHH QVQDINNRRRALYEKTAGETGTTVQQVARIAGEKQLAERVKPGEYYMDATGSWKQK HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHCCCCCEEECCCCCCCCC >Mature Secondary Structure TTIRTLILGLVLMFGGVAVTQASAQGNSQIETARSTGVIGERIDGYLGVVGSADAEIVR HHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHH QVQDINNRRRALYEKTAGETGTTVQQVARIAGEKQLAERVKPGEYYMDATGSWKQK HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHCCCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA