Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is ydbL [C]

Identifier: 114800201

GI number: 114800201

Start: 640879

End: 641229

Strand: Direct

Name: ydbL [C]

Synonym: HNE_0636

Alternate gene names: 114800201

Gene position: 640879-641229 (Clockwise)

Preceding gene: 114799667

Following gene: 114797645

Centisome position: 17.3

GC content: 60.97

Gene sequence:

>351_bases
ATGACCACTATTCGTACTCTGATCCTTGGCCTGGTCCTGATGTTCGGCGGCGTTGCCGTCACGCAGGCCTCTGCGCAGGG
CAACTCGCAGATCGAGACGGCCCGTTCCACAGGCGTCATCGGTGAGCGCATCGACGGCTATCTCGGCGTGGTCGGCTCCG
CTGACGCTGAAATTGTCCGGCAGGTGCAGGACATCAACAACCGCCGCCGCGCGCTCTATGAAAAGACCGCTGGCGAAACC
GGAACGACCGTTCAACAGGTCGCCCGCATCGCCGGTGAGAAACAACTCGCCGAACGCGTGAAACCCGGTGAGTATTACAT
GGACGCCACCGGCAGCTGGAAACAGAAATAG

Upstream 100 bases:

>100_bases
CACGCAGGAAGTGCGCATCAAGCTGGACCGTGAAGTCACGGACCTGATCGCGGACAACCCTGACCTGTTCTGATTGCCTG
GGTCCCTAGGGGAGACACAC

Downstream 100 bases:

>100_bases
GCTTCGGCCTGAATTGGACCCCGGATAGGCACGCCCTGTCCGGGGTTTGTTGTTTCTTAGTCCTTCCCTGACCGCCCGGC
GGCCCTAACTGTCCCAATCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MTTIRTLILGLVLMFGGVAVTQASAQGNSQIETARSTGVIGERIDGYLGVVGSADAEIVRQVQDINNRRRALYEKTAGET
GTTVQQVARIAGEKQLAERVKPGEYYMDATGSWKQK

Sequences:

>Translated_116_residues
MTTIRTLILGLVLMFGGVAVTQASAQGNSQIETARSTGVIGERIDGYLGVVGSADAEIVRQVQDINNRRRALYEKTAGET
GTTVQQVARIAGEKQLAERVKPGEYYMDATGSWKQK
>Mature_115_residues
TTIRTLILGLVLMFGGVAVTQASAQGNSQIETARSTGVIGERIDGYLGVVGSADAEIVRQVQDINNRRRALYEKTAGETG
TTVQQVARIAGEKQLAERVKPGEYYMDATGSWKQK

Specific function: Unknown

COG id: COG3784

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081895, Length=86, Percent_Identity=40.6976744186046, Blast_Score=64, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12517; Mature: 12386

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTIRTLILGLVLMFGGVAVTQASAQGNSQIETARSTGVIGERIDGYLGVVGSADAEIVR
CHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHH
QVQDINNRRRALYEKTAGETGTTVQQVARIAGEKQLAERVKPGEYYMDATGSWKQK
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHCCCCCEEECCCCCCCCC
>Mature Secondary Structure 
TTIRTLILGLVLMFGGVAVTQASAQGNSQIETARSTGVIGERIDGYLGVVGSADAEIVR
HHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHH
QVQDINNRRRALYEKTAGETGTTVQQVARIAGEKQLAERVKPGEYYMDATGSWKQK
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHCCCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA