Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
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Accession | NC_008358 |
Length | 3,705,021 |
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The map label for this gene is 114800151
Identifier: 114800151
GI number: 114800151
Start: 3483860
End: 3486091
Strand: Reverse
Name: 114800151
Synonym: HNE_3332
Alternate gene names: NA
Gene position: 3486091-3483860 (Counterclockwise)
Preceding gene: 114799803
Following gene: 114800290
Centisome position: 94.09
GC content: 64.07
Gene sequence:
>2232_bases ATGAGCCAATCTTCTGCCGCCATCGCGCCGCCAGGCCCTGTCCTGCATCGCTGGGGCAGCCTGCCTTTCGTGGTCACCGT TTTTCTGTCTGCGGCTCTGGTTTTCCTGGTGCAGCCGATGTTTGCCCGCATGGCGACACCGCTGCTCGGCGGCTCCCCGA ATGTGTGGAATGTCTCGCTGGTGTGTTTTCAGGCCGCGCTGCTGGCAGGCTATGCCTATGCACATATGCTGACGCATCTG GTGAAGTCCGTGCGCAATCAGGTGATCGCACATGGCGCGCTGCTTGTGGCGGCGGCGCTGGTGCTGCCCTTTGAGTTGAC GGGGCTGTTCGGCAGTCCCGACCCCGCGCGCCCGGCGCTGTGGCTGATCGGTGTGTTTGCACTCTCGATTGCGCCGCCCT TCGCCATAATCTCGGCGACCGCGCCGCTGATCCAGGCCTGGTATGCCCGCACCGGCCGGGAAGACGCACATGACCCCTAC CATCTTTATGCGGCCAGCAATGCCGGCTCCCTGCTGGGGCTGGCCGCCTACCCGCTGCTGCTGGAACCGCTCGCGCCGTT GGCCGGGCAGGCGATGGCCTGGTCTTTGGGATACGGCGTTTTGCTGGTTCTGCTCATCGGATGCGGGCTGCTGACGATGC GCGCACCGCTGCAGGCCCGGCTTGCCGATGTGAGCCCGGAAGCCGCTGCCGGTTCGCCTGCGCTGGGCGGGCTCTGGCGC CAGAGGCTCTGGTGGCTGGTGCTGGCCTTTGTGCCGTCCAGCCTGCTGGTGGGGGTGACCACGCATATTGCGACCGATGT GGCCAGCGCGCCTTTCCTCTGGGCGCCGCCGCTGATGCTTTATATTGCAAGCTTCATTGTTGTGTTTTCCAAGCGTCCGG TGATCGGGCGGGCATTGTCTCTGGCCATTCTGCCTGTGTTCGTCGGGCTGGCCCTCTTTACCCTGACGAAGGTGTCTGGC GTGCCGACACTGCTGAGCTTCTTCGTGCATCTGGGGGCGCTGTTCTTTGCCGCGGTGGCCTGTCACGGGCTGATGGCAGA TGACCGGCCCGAGACTGGCCGGCTGACCGAGTTTTATCTTCTGATGTCGCTTGGCGGCGTGCTCGGCGGCGCGTTCAATG CGCTGCTTGTCCCGGTGATCTTCAACAGTGTCGCCGAATATCCGCTGATGCTGCTGGCAGTATTGTTGCTGTTGCCCCAG CGCTATTGGCTCGGGCCGACCTGGATGGTGGTAATGGCGGCGGTTGCTGGCGGCACAGCTTTGATCGCGATGTATGTCTA TGAGGTGCCAGCGCTTGCGCAGCAGCCCAGCAGGTCCTTCTTCATACTGCTGACGGTGTCGCTGGTCCTGCTCTATCTCG TGCGCCGCTCGCGCCTGGCATGTGTGGCGGCGGCCGCTTCCATCTGGGCGATCGGTGTTGCGGCCAGCCCAACCGTCGGG GCTTACTCCGAGCGCGGATTTTTCGGCGTCGTTAAAGTTCATGAGCGGGATGGATACCGGGTGATGGTGCATGGCACCAC GCTGCACGGCGCTCAGGCGCTTGGTGAAGACGCCTGGCGCCCGGCGACCTATTATGCCCCCGAGACGCCCATCGGACAGG TCTTTGCCGCGCACACCCGGCCTGGGCGGGTCGGCGCGCTGGGCCTTGGGGTTGGGTCGGTGGCCTGTTATGCCGGTCCA GGTCAGCAGTATACGTTCTATGAGATCGACCCGATCGTGGCGCGCCTTGCAAAGGACGCCGCACAGTTCACCTATCTCTC CGAATGTGCTCCGGATGCGGACATCGTTCTGGGTGACGGCCGCCTGACCCTCGCCGATGAGCCTGAAGGCGCGTTCGACA TTCTGCTGATTGATGCGTTCTCCTCAGATTCCGTGCCGGCACATCTGATGACGCGGGAGGCGGTATCGCTTTACCTCTCC CGGCTGAAGGAAGACGGGGTGGTTCTGCTGCATGTGTCCAATCGCTATATGGCCCTGGAAACGGTTGTCGCCCGGATCGC AGGCGAGTTGGGTGTTCCGGCTCGCGCGCAGTACCGGACTGTGGCCGAGGAAGGCTACCGCGCGCAGTCGAGTGTCGTGG TCGCGCTGGCCCGCAATGAGCTGGCGCTCGCGCCGCTGGACGCGACCGGTGCCTGGGGCGTACTGGAGAGCGATGGTGGC CGGGCGTGGACGGATGATTATTCCAACATCCCCGGATCGATCTGGGACCGGCTGGTTCACAAGAAACGTTGA
Upstream 100 bases:
>100_bases GCCCCGGATTTCGCAACTGCGCCATATGCAGCTGGCTATGGCCAATCGTGAAGCGGTTCTTTTACCCGATCCTGCTAGCC TGATCTCAAAGGGAGCGTCC
Downstream 100 bases:
>100_bases TGCGGGAAGGTTAGCTTTCCGCGCCTTCGGCTGAGGCCTGCTGCTTGCGCAGCTCGCTGGCGCGCACCTTGACGCTTTCC GAACGCAGCTGGCCACAGGC
Product: putative transporter
Products: NA
Alternate protein names: Spermine/Spermidine Synthase Protein; Integral Membrane Protein-Like; Ferrichrome ABC Transporter Permease; Integral Membrane Protein
Number of amino acids: Translated: 743; Mature: 742
Protein sequence:
>743_residues MSQSSAAIAPPGPVLHRWGSLPFVVTVFLSAALVFLVQPMFARMATPLLGGSPNVWNVSLVCFQAALLAGYAYAHMLTHL VKSVRNQVIAHGALLVAAALVLPFELTGLFGSPDPARPALWLIGVFALSIAPPFAIISATAPLIQAWYARTGREDAHDPY HLYAASNAGSLLGLAAYPLLLEPLAPLAGQAMAWSLGYGVLLVLLIGCGLLTMRAPLQARLADVSPEAAAGSPALGGLWR QRLWWLVLAFVPSSLLVGVTTHIATDVASAPFLWAPPLMLYIASFIVVFSKRPVIGRALSLAILPVFVGLALFTLTKVSG VPTLLSFFVHLGALFFAAVACHGLMADDRPETGRLTEFYLLMSLGGVLGGAFNALLVPVIFNSVAEYPLMLLAVLLLLPQ RYWLGPTWMVVMAAVAGGTALIAMYVYEVPALAQQPSRSFFILLTVSLVLLYLVRRSRLACVAAAASIWAIGVAASPTVG AYSERGFFGVVKVHERDGYRVMVHGTTLHGAQALGEDAWRPATYYAPETPIGQVFAAHTRPGRVGALGLGVGSVACYAGP GQQYTFYEIDPIVARLAKDAAQFTYLSECAPDADIVLGDGRLTLADEPEGAFDILLIDAFSSDSVPAHLMTREAVSLYLS RLKEDGVVLLHVSNRYMALETVVARIAGELGVPARAQYRTVAEEGYRAQSSVVVALARNELALAPLDATGAWGVLESDGG RAWTDDYSNIPGSIWDRLVHKKR
Sequences:
>Translated_743_residues MSQSSAAIAPPGPVLHRWGSLPFVVTVFLSAALVFLVQPMFARMATPLLGGSPNVWNVSLVCFQAALLAGYAYAHMLTHL VKSVRNQVIAHGALLVAAALVLPFELTGLFGSPDPARPALWLIGVFALSIAPPFAIISATAPLIQAWYARTGREDAHDPY HLYAASNAGSLLGLAAYPLLLEPLAPLAGQAMAWSLGYGVLLVLLIGCGLLTMRAPLQARLADVSPEAAAGSPALGGLWR QRLWWLVLAFVPSSLLVGVTTHIATDVASAPFLWAPPLMLYIASFIVVFSKRPVIGRALSLAILPVFVGLALFTLTKVSG VPTLLSFFVHLGALFFAAVACHGLMADDRPETGRLTEFYLLMSLGGVLGGAFNALLVPVIFNSVAEYPLMLLAVLLLLPQ RYWLGPTWMVVMAAVAGGTALIAMYVYEVPALAQQPSRSFFILLTVSLVLLYLVRRSRLACVAAAASIWAIGVAASPTVG AYSERGFFGVVKVHERDGYRVMVHGTTLHGAQALGEDAWRPATYYAPETPIGQVFAAHTRPGRVGALGLGVGSVACYAGP GQQYTFYEIDPIVARLAKDAAQFTYLSECAPDADIVLGDGRLTLADEPEGAFDILLIDAFSSDSVPAHLMTREAVSLYLS RLKEDGVVLLHVSNRYMALETVVARIAGELGVPARAQYRTVAEEGYRAQSSVVVALARNELALAPLDATGAWGVLESDGG RAWTDDYSNIPGSIWDRLVHKKR >Mature_742_residues SQSSAAIAPPGPVLHRWGSLPFVVTVFLSAALVFLVQPMFARMATPLLGGSPNVWNVSLVCFQAALLAGYAYAHMLTHLV KSVRNQVIAHGALLVAAALVLPFELTGLFGSPDPARPALWLIGVFALSIAPPFAIISATAPLIQAWYARTGREDAHDPYH LYAASNAGSLLGLAAYPLLLEPLAPLAGQAMAWSLGYGVLLVLLIGCGLLTMRAPLQARLADVSPEAAAGSPALGGLWRQ RLWWLVLAFVPSSLLVGVTTHIATDVASAPFLWAPPLMLYIASFIVVFSKRPVIGRALSLAILPVFVGLALFTLTKVSGV PTLLSFFVHLGALFFAAVACHGLMADDRPETGRLTEFYLLMSLGGVLGGAFNALLVPVIFNSVAEYPLMLLAVLLLLPQR YWLGPTWMVVMAAVAGGTALIAMYVYEVPALAQQPSRSFFILLTVSLVLLYLVRRSRLACVAAAASIWAIGVAASPTVGA YSERGFFGVVKVHERDGYRVMVHGTTLHGAQALGEDAWRPATYYAPETPIGQVFAAHTRPGRVGALGLGVGSVACYAGPG QQYTFYEIDPIVARLAKDAAQFTYLSECAPDADIVLGDGRLTLADEPEGAFDILLIDAFSSDSVPAHLMTREAVSLYLSR LKEDGVVLLHVSNRYMALETVVARIAGELGVPARAQYRTVAEEGYRAQSSVVVALARNELALAPLDATGAWGVLESDGGR AWTDDYSNIPGSIWDRLVHKKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 79173; Mature: 79042
Theoretical pI: Translated: 7.26; Mature: 7.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSSAAIAPPGPVLHRWGSLPFVVTVFLSAALVFLVQPMFARMATPLLGGSPNVWNVSL CCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHH VCFQAALLAGYAYAHMLTHLVKSVRNQVIAHGALLVAAALVLPFELTGLFGSPDPARPAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH WLIGVFALSIAPPFAIISATAPLIQAWYARTGREDAHDPYHLYAASNAGSLLGLAAYPLL HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHH LEPLAPLAGQAMAWSLGYGVLLVLLIGCGLLTMRAPLQARLADVSPEAAAGSPALGGLWR HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCHHHHHH QRLWWLVLAFVPSSLLVGVTTHIATDVASAPFLWAPPLMLYIASFIVVFSKRPVIGRALS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHH LAILPVFVGLALFTLTKVSGVPTLLSFFVHLGALFFAAVACHGLMADDRPETGRLTEFYL HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH LMSLGGVLGGAFNALLVPVIFNSVAEYPLMLLAVLLLLPQRYWLGPTWMVVMAAVAGGTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHCCHH LIAMYVYEVPALAQQPSRSFFILLTVSLVLLYLVRRSRLACVAAAASIWAIGVAASPTVG HHHHHHHHCCHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCC AYSERGFFGVVKVHERDGYRVMVHGTTLHGAQALGEDAWRPATYYAPETPIGQVFAAHTR CCCCCCEEEEEEEEECCCCEEEEECCEEHHHHHHCCCCCCCCEECCCCCCHHHHEECCCC PGRVGALGLGVGSVACYAGPGQQYTFYEIDPIVARLAKDAAQFTYLSECAPDADIVLGDG CCCCEEEECCCCCEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECC RLTLADEPEGAFDILLIDAFSSDSVPAHLMTREAVSLYLSRLKEDGVVLLHVSNRYMALE EEEECCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHH TVVARIAGELGVPARAQYRTVAEEGYRAQSSVVVALARNELALAPLDATGAWGVLESDGG HHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCEEEEECCCCCCCCEEECCCC RAWTDDYSNIPGSIWDRLVHKKR CEECCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure SQSSAAIAPPGPVLHRWGSLPFVVTVFLSAALVFLVQPMFARMATPLLGGSPNVWNVSL CCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHH VCFQAALLAGYAYAHMLTHLVKSVRNQVIAHGALLVAAALVLPFELTGLFGSPDPARPAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH WLIGVFALSIAPPFAIISATAPLIQAWYARTGREDAHDPYHLYAASNAGSLLGLAAYPLL HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHH LEPLAPLAGQAMAWSLGYGVLLVLLIGCGLLTMRAPLQARLADVSPEAAAGSPALGGLWR HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCHHHHHH QRLWWLVLAFVPSSLLVGVTTHIATDVASAPFLWAPPLMLYIASFIVVFSKRPVIGRALS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHH LAILPVFVGLALFTLTKVSGVPTLLSFFVHLGALFFAAVACHGLMADDRPETGRLTEFYL HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH LMSLGGVLGGAFNALLVPVIFNSVAEYPLMLLAVLLLLPQRYWLGPTWMVVMAAVAGGTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHCCHH LIAMYVYEVPALAQQPSRSFFILLTVSLVLLYLVRRSRLACVAAAASIWAIGVAASPTVG HHHHHHHHCCHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCC AYSERGFFGVVKVHERDGYRVMVHGTTLHGAQALGEDAWRPATYYAPETPIGQVFAAHTR CCCCCCEEEEEEEEECCCCEEEEECCEEHHHHHHCCCCCCCCEECCCCCCHHHHEECCCC PGRVGALGLGVGSVACYAGPGQQYTFYEIDPIVARLAKDAAQFTYLSECAPDADIVLGDG CCCCEEEECCCCCEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECC RLTLADEPEGAFDILLIDAFSSDSVPAHLMTREAVSLYLSRLKEDGVVLLHVSNRYMALE EEEECCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHH TVVARIAGELGVPARAQYRTVAEEGYRAQSSVVVALARNELALAPLDATGAWGVLESDGG HHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCEEEEECCCCCCCCEEECCCC RAWTDDYSNIPGSIWDRLVHKKR CEECCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA