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The map label for this gene is fliR [H]

Identifier: 114799957

GI number: 114799957

Start: 260383

End: 261096

Strand: Direct

Name: fliR [H]

Synonym: HNE_0274

Alternate gene names: 114799957

Gene position: 260383-261096 (Clockwise)

Preceding gene: 114797604

Following gene: 114799674

Centisome position: 7.03

GC content: 61.76

Gene sequence:

>714_bases
ATGGTCATGTTCATGACCGTGATTGCCCGGCTCTCCTTTGTCGTCTTCATGATGCCGGGGATCGGGGATCAGGTGATCTC
CTCACGCACCCGCCTGTTCGTACTGCTCGGCATGGCTGCCGCGATCGCTTCGACCGGGGTGGTGGCGGCGCCGTCCGCGC
CGGGGATCGGCGACCTGGTTCTGCTGCTGGGCAGTGAGGTGGTGATCGGCTTCGGTCTGGGCGCGTTGCTGCGCCTGTCG
GTCTGGATGCTGACGATTGCCGGAACGGTGATCGCCCAGTCGATTGGCCTGGCGCAGTTCCTGGGGGTTGCCCTGGAACA
TGAGGCGCAGACGGTAACGTCCAACATGCTGTCTCTGGCGGGTACGACGATCTTGCTGACCGCCAACTATCATGTGGCCG
TCGTGGACGGATTGATGCGGCTGTACACCGAAATCCCCCTGGGCGAGGTGGGGCAGGTAAGCTGGCCGATGATCTTTGAC
AGCTTTTATTCGGCGATGGGCTTTGCCCTGATGCTGGCCTGGCCGTTTGTGGCGGCCAACCTGCTCTACAACATCTGTCT
GGGCTTCATAAACAAGGCACTGCCATCGCTGATGGTGGCGTTTGTCGGCGCGCCCTTCATGGTGGGGGCGGGGGTGATGC
TGCTGGCGATTTCGGTCTCCGGGATGCTGATCATCTGGAAAGACCGGGCGCTTCAGGTTATCGGTTGGCTGTGA

Upstream 100 bases:

>100_bases
TCGTCGCCTATGAAGAGATCAACTCCAAGAGCAAGCCCTACATCATCGGCGTGGCCTGATGGAACTGATCGCCCCATATC
TGGGGCAGGCGAGCCCGTGG

Downstream 100 bases:

>100_bases
GGTAGACGCATGGCCGAACAAGACCAGGACAGTGGTGAAAAGGAATTTGATGCCTCCGAGCAGCGGCTGCGGGATGCCCG
CAAGGACGGCGATGTTCCCC

Product: flagellar biosynthetic protein FliR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MVMFMTVIARLSFVVFMMPGIGDQVISSRTRLFVLLGMAAAIASTGVVAAPSAPGIGDLVLLLGSEVVIGFGLGALLRLS
VWMLTIAGTVIAQSIGLAQFLGVALEHEAQTVTSNMLSLAGTTILLTANYHVAVVDGLMRLYTEIPLGEVGQVSWPMIFD
SFYSAMGFALMLAWPFVAANLLYNICLGFINKALPSLMVAFVGAPFMVGAGVMLLAISVSGMLIIWKDRALQVIGWL

Sequences:

>Translated_237_residues
MVMFMTVIARLSFVVFMMPGIGDQVISSRTRLFVLLGMAAAIASTGVVAAPSAPGIGDLVLLLGSEVVIGFGLGALLRLS
VWMLTIAGTVIAQSIGLAQFLGVALEHEAQTVTSNMLSLAGTTILLTANYHVAVVDGLMRLYTEIPLGEVGQVSWPMIFD
SFYSAMGFALMLAWPFVAANLLYNICLGFINKALPSLMVAFVGAPFMVGAGVMLLAISVSGMLIIWKDRALQVIGWL
>Mature_237_residues
MVMFMTVIARLSFVVFMMPGIGDQVISSRTRLFVLLGMAAAIASTGVVAAPSAPGIGDLVLLLGSEVVIGFGLGALLRLS
VWMLTIAGTVIAQSIGLAQFLGVALEHEAQTVTSNMLSLAGTTILLTANYHVAVVDGLMRLYTEIPLGEVGQVSWPMIFD
SFYSAMGFALMLAWPFVAANLLYNICLGFINKALPSLMVAFVGAPFMVGAGVMLLAISVSGMLIIWKDRALQVIGWL

Specific function: Role in flagellar biosynthesis [H]

COG id: COG1684

COG function: function code NU; Flagellar biosynthesis pathway, component FliR

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliR/mopE/spaR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006303
- InterPro:   IPR002010 [H]

Pfam domain/function: PF01311 Bac_export_1 [H]

EC number: NA

Molecular weight: Translated: 25062; Mature: 25062

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
6.8 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
6.8 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVMFMTVIARLSFVVFMMPGIGDQVISSRTRLFVLLGMAAAIASTGVVAAPSAPGIGDLV
CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHH
LLLGSEVVIGFGLGALLRLSVWMLTIAGTVIAQSIGLAQFLGVALEHEAQTVTSNMLSLA
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GTTILLTANYHVAVVDGLMRLYTEIPLGEVGQVSWPMIFDSFYSAMGFALMLAWPFVAAN
CCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLYNICLGFINKALPSLMVAFVGAPFMVGAGVMLLAISVSGMLIIWKDRALQVIGWL
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEEECCHHHHHCCC
>Mature Secondary Structure
MVMFMTVIARLSFVVFMMPGIGDQVISSRTRLFVLLGMAAAIASTGVVAAPSAPGIGDLV
CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHH
LLLGSEVVIGFGLGALLRLSVWMLTIAGTVIAQSIGLAQFLGVALEHEAQTVTSNMLSLA
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GTTILLTANYHVAVVDGLMRLYTEIPLGEVGQVSWPMIFDSFYSAMGFALMLAWPFVAAN
CCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLYNICLGFINKALPSLMVAFVGAPFMVGAGVMLLAISVSGMLIIWKDRALQVIGWL
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEEECCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7814323; 11259647 [H]