Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
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Accession | NC_008358 |
Length | 3,705,021 |
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The map label for this gene is 114799918
Identifier: 114799918
GI number: 114799918
Start: 610523
End: 611140
Strand: Direct
Name: 114799918
Synonym: HNE_0611
Alternate gene names: NA
Gene position: 610523-611140 (Clockwise)
Preceding gene: 114799127
Following gene: 114797799
Centisome position: 16.48
GC content: 66.34
Gene sequence:
>618_bases ATGCAGCACAAGGACATCTGGCGGGGGCTTGATCTCCTCGCCGCCCATCACGGCCTCACCGCCTCAGCCCTCGCCAAACG CGCGGGGCTCGACCCTACAAGTTTCAACCCGTCCAAACGCGAGGCCGCCGATGGCCGCCCCCGCTGGCCCAGCACAGAGA GCCTCGCCCGCGTGCTCGACGCCGTTGGCGCAGGCTTTGACGATTTCGCCGCCCTCGTCGAAGGCCGCCGGGGTGGCTCC GCCCCCCTCATCGGCTTTGCCCAGGCGGGCCAGGACGGGTTCTTTGATGATGCCGGTTTCCCCGTCGGCGCAGGCTGGGA GGAAGTCCGCTTCCCCGGCCTTGGCGCAGAGACGGTCTACGCCCTTGAAATCAGTGGCGATTCGATGGAGCCCGCTTATA GGGCCGGAGACCGCATCATCGTCGCCCCCGGCGCCGAAGTGAAACCGGGTGACCGCGTGGTTGCCAAAACTGTAGCAGGC GAAGTCATGGCCAAGGTGCTGGCCCGGAAGAATACAAGGCTGATCGAACTCGCCTCGCTCAATCCCGCTTATCCCGCCCG CGAGTTCAAACCCTCCGAAGTCGCCTGGCTCGCCCGCATCCTCTGGGCCAGCCAGTAA
Upstream 100 bases:
>100_bases CAATATCCCCCCATCAGACTGGACACCGCCCAGCCGTTGACGATAGGCATAAATTCCTGCAATAGGAATAAATTCTATAT TTTCAGACGGATGCGTGGCG
Downstream 100 bases:
>100_bases ACCCTCCGCTCACTCCGCCTCAGCCGGAAATGCGTCCACGCAGGTTTTCAGGATCTCAATCCCGCTGCCCAGGCCGGGTA CGGGAAAGCTGGCGCTCGCC
Product: S24 family peptidase
Products: NA
Alternate protein names: Peptidase; Transcriptional Regulator; Bacteriophage Repressor; Peptidase Family S; S24 Family Peptidase; Transcriptional Regulator Protein; Phage-Related Transcriptional Regulator Protein; LexA-Like Transcriptional Repressor; Peptidase Family; Cro/CI Family Transcriptional Regulator; Transcription Regulator Protein; Phage-Related Transcriptional Regulator; Peptidase S
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MQHKDIWRGLDLLAAHHGLTASALAKRAGLDPTSFNPSKREAADGRPRWPSTESLARVLDAVGAGFDDFAALVEGRRGGS APLIGFAQAGQDGFFDDAGFPVGAGWEEVRFPGLGAETVYALEISGDSMEPAYRAGDRIIVAPGAEVKPGDRVVAKTVAG EVMAKVLARKNTRLIELASLNPAYPAREFKPSEVAWLARILWASQ
Sequences:
>Translated_205_residues MQHKDIWRGLDLLAAHHGLTASALAKRAGLDPTSFNPSKREAADGRPRWPSTESLARVLDAVGAGFDDFAALVEGRRGGS APLIGFAQAGQDGFFDDAGFPVGAGWEEVRFPGLGAETVYALEISGDSMEPAYRAGDRIIVAPGAEVKPGDRVVAKTVAG EVMAKVLARKNTRLIELASLNPAYPAREFKPSEVAWLARILWASQ >Mature_205_residues MQHKDIWRGLDLLAAHHGLTASALAKRAGLDPTSFNPSKREAADGRPRWPSTESLARVLDAVGAGFDDFAALVEGRRGGS APLIGFAQAGQDGFFDDAGFPVGAGWEEVRFPGLGAETVYALEISGDSMEPAYRAGDRIIVAPGAEVKPGDRVVAKTVAG EVMAKVLARKNTRLIELASLNPAYPAREFKPSEVAWLARILWASQ
Specific function: Unknown
COG id: COG2932
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21838; Mature: 21838
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: PS01076 ACETATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQHKDIWRGLDLLAAHHGLTASALAKRAGLDPTSFNPSKREAADGRPRWPSTESLARVLD CCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHH AVGAGFDDFAALVEGRRGGSAPLIGFAQAGQDGFFDDAGFPVGAGWEEVRFPGLGAETVY HHCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEE ALEISGDSMEPAYRAGDRIIVAPGAEVKPGDRVVAKTVAGEVMAKVLARKNTRLIELASL EEEECCCCCCHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECC NPAYPAREFKPSEVAWLARILWASQ CCCCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MQHKDIWRGLDLLAAHHGLTASALAKRAGLDPTSFNPSKREAADGRPRWPSTESLARVLD CCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHH AVGAGFDDFAALVEGRRGGSAPLIGFAQAGQDGFFDDAGFPVGAGWEEVRFPGLGAETVY HHCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEE ALEISGDSMEPAYRAGDRIIVAPGAEVKPGDRVVAKTVAGEVMAKVLARKNTRLIELASL EEEECCCCCCHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECC NPAYPAREFKPSEVAWLARILWASQ CCCCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA