Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

Click here to switch to the map view.

The map label for this gene is 114799851

Identifier: 114799851

GI number: 114799851

Start: 3442231

End: 3443337

Strand: Reverse

Name: 114799851

Synonym: HNE_3280

Alternate gene names: NA

Gene position: 3443337-3442231 (Counterclockwise)

Preceding gene: 114798845

Following gene: 114800031

Centisome position: 92.94

GC content: 65.04

Gene sequence:

>1107_bases
ATGAGCGATTCGTTTGAAAGCGCCGCCGATACGGCGATCGAGCATGCCGCGGCGGATGCGGCTGCCGGGCTCGCCCGCGG
CCGGGGCACAGGCGCTGACACCCATTGCCGCAATTGTGGCGCCGCGCTTGAAGGTGATTTCTGCCATGTCTGCGGGCAAA
GCGCACAGAGCGTGCGCCGGCCCTTCTGGGCCTTGCTGGCCGAAAGCCTGGAAACCCTGTTTGCCGTGGATGGCCGCCTT
GCGCGGACGGTGCCTGACCTGCTGCTGCGGCCGGGGCGGATGACGCGGGCGTATCTGGATGGCCAGCGCATGCGCTTCAT
TCCGCCCTTCCGGCTTTATGTGGTGGCCTCGCTGCTGTTCTTCGTGTTGCTGCCGCTGGTGACGGGGCAGGGCCTTTCGG
TGGTGCCCGGCGGCGCGCAGAACTTCGACGAGGCGCGCGAGCAGATCGAGACAGCCTATGCCGACGGCGACATGACCGAC
GCCGAATATCAGGAGGCGATTGCGGGCCTCACGGAAGTCGAGCGCCTCTGGCGCAGCGGCCCCACAAATCTCCTCACACC
GGACGCTCCGACCCCGCCTGGCGAGACCGATGCGCCCGCCGCCGGCGACGAGAGTGAATGGGCTGGCTTCATGCCGGAAG
AGGCGCTCGACGCCGTGCGCGCGGCGGGGGCGGAGGGCGACCCGGAAGCTGCGCGGTTTGCCGAGGTGATGGACAATCCC
GGCCAGCTGGCCGAACAGACGCAGGAATGGATTCCGCGCATGATGTTCGTGCTGCTGCCGGTTTATGCCTGCCTTCTGGG
TCTGGTGTATCTCTGGCGCCGGCAGTTCCTGTTCTATGACCATCTGATCGTATCGCTGCACTTCCATTCTGCCCTGTTCT
TCTCGATGGCGATTGGCATGCTGGCGGCTTATGTGGTCGGCGTCGGCTGGGTGACCCTGGCGATCATCGTTTATTCCAAC
TGGTATCTCTATCGCCTGAACCGGACCGTTTATGGCCGGGGGAGGTTCAGTTCGGTGCTCCGGGTGCTGACGCTCGACAG
CATCTATTTCTGCATCCTCATGTCGGCGTTGCTGACGGCGGTGATCCTCGGGGCGTTGTCGCTGTGA

Upstream 100 bases:

>100_bases
GGACTTGCGCCGGAGGGGCGGGCTTTGCGATATAATGAGGCTACGGCCCGCTTCATGGCGAAAAAGCCACGCGTGTTCCG
CTGATCCGGGAGGGGAAGGC

Downstream 100 bases:

>100_bases
TTGCTCCGGGGACCCTCCGCGCCGAAGCGCTGACGCTGCCTCACGCGGTTGAGCGGCCCCACTTCGACTGGGCGAGCTTT
CGGGTAGACGCGCCGAAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 368; Mature: 367

Protein sequence:

>368_residues
MSDSFESAADTAIEHAAADAAAGLARGRGTGADTHCRNCGAALEGDFCHVCGQSAQSVRRPFWALLAESLETLFAVDGRL
ARTVPDLLLRPGRMTRAYLDGQRMRFIPPFRLYVVASLLFFVLLPLVTGQGLSVVPGGAQNFDEAREQIETAYADGDMTD
AEYQEAIAGLTEVERLWRSGPTNLLTPDAPTPPGETDAPAAGDESEWAGFMPEEALDAVRAAGAEGDPEAARFAEVMDNP
GQLAEQTQEWIPRMMFVLLPVYACLLGLVYLWRRQFLFYDHLIVSLHFHSALFFSMAIGMLAAYVVGVGWVTLAIIVYSN
WYLYRLNRTVYGRGRFSSVLRVLTLDSIYFCILMSALLTAVILGALSL

Sequences:

>Translated_368_residues
MSDSFESAADTAIEHAAADAAAGLARGRGTGADTHCRNCGAALEGDFCHVCGQSAQSVRRPFWALLAESLETLFAVDGRL
ARTVPDLLLRPGRMTRAYLDGQRMRFIPPFRLYVVASLLFFVLLPLVTGQGLSVVPGGAQNFDEAREQIETAYADGDMTD
AEYQEAIAGLTEVERLWRSGPTNLLTPDAPTPPGETDAPAAGDESEWAGFMPEEALDAVRAAGAEGDPEAARFAEVMDNP
GQLAEQTQEWIPRMMFVLLPVYACLLGLVYLWRRQFLFYDHLIVSLHFHSALFFSMAIGMLAAYVVGVGWVTLAIIVYSN
WYLYRLNRTVYGRGRFSSVLRVLTLDSIYFCILMSALLTAVILGALSL
>Mature_367_residues
SDSFESAADTAIEHAAADAAAGLARGRGTGADTHCRNCGAALEGDFCHVCGQSAQSVRRPFWALLAESLETLFAVDGRLA
RTVPDLLLRPGRMTRAYLDGQRMRFIPPFRLYVVASLLFFVLLPLVTGQGLSVVPGGAQNFDEAREQIETAYADGDMTDA
EYQEAIAGLTEVERLWRSGPTNLLTPDAPTPPGETDAPAAGDESEWAGFMPEEALDAVRAAGAEGDPEAARFAEVMDNPG
QLAEQTQEWIPRMMFVLLPVYACLLGLVYLWRRQFLFYDHLIVSLHFHSALFFSMAIGMLAAYVVGVGWVTLAIIVYSNW
YLYRLNRTVYGRGRFSSVLRVLTLDSIYFCILMSALLTAVILGALSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40265; Mature: 40133

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDSFESAADTAIEHAAADAAAGLARGRGTGADTHCRNCGAALEGDFCHVCGQSAQSVRR
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCHHHHHCHHHHHHHH
PFWALLAESLETLFAVDGRLARTVPDLLLRPGRMTRAYLDGQRMRFIPPFRLYVVASLLF
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHCCCCEECCCHHHHHHHHHHHH
FVLLPLVTGQGLSVVPGGAQNFDEAREQIETAYADGDMTDAEYQEAIAGLTEVERLWRSG
HHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC
PTNLLTPDAPTPPGETDAPAAGDESEWAGFMPEEALDAVRAAGAEGDPEAARFAEVMDNP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCC
GQLAEQTQEWIPRMMFVLLPVYACLLGLVYLWRRQFLFYDHLIVSLHFHSALFFSMAIGM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAAYVVGVGWVTLAIIVYSNWYLYRLNRTVYGRGRFSSVLRVLTLDSIYFCILMSALLTA
HHHHHHHHHHHHHHHHHHCCEEEEEECCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VILGALSL
HHHHHHCC
>Mature Secondary Structure 
SDSFESAADTAIEHAAADAAAGLARGRGTGADTHCRNCGAALEGDFCHVCGQSAQSVRR
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCHHHHHCHHHHHHHH
PFWALLAESLETLFAVDGRLARTVPDLLLRPGRMTRAYLDGQRMRFIPPFRLYVVASLLF
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHCCCCEECCCHHHHHHHHHHHH
FVLLPLVTGQGLSVVPGGAQNFDEAREQIETAYADGDMTDAEYQEAIAGLTEVERLWRSG
HHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC
PTNLLTPDAPTPPGETDAPAAGDESEWAGFMPEEALDAVRAAGAEGDPEAARFAEVMDNP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCC
GQLAEQTQEWIPRMMFVLLPVYACLLGLVYLWRRQFLFYDHLIVSLHFHSALFFSMAIGM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAAYVVGVGWVTLAIIVYSNWYLYRLNRTVYGRGRFSSVLRVLTLDSIYFCILMSALLTA
HHHHHHHHHHHHHHHHHHCCEEEEEECCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VILGALSL
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA