Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
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Accession | NC_008358 |
Length | 3,705,021 |
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The map label for this gene is 114799851
Identifier: 114799851
GI number: 114799851
Start: 3442231
End: 3443337
Strand: Reverse
Name: 114799851
Synonym: HNE_3280
Alternate gene names: NA
Gene position: 3443337-3442231 (Counterclockwise)
Preceding gene: 114798845
Following gene: 114800031
Centisome position: 92.94
GC content: 65.04
Gene sequence:
>1107_bases ATGAGCGATTCGTTTGAAAGCGCCGCCGATACGGCGATCGAGCATGCCGCGGCGGATGCGGCTGCCGGGCTCGCCCGCGG CCGGGGCACAGGCGCTGACACCCATTGCCGCAATTGTGGCGCCGCGCTTGAAGGTGATTTCTGCCATGTCTGCGGGCAAA GCGCACAGAGCGTGCGCCGGCCCTTCTGGGCCTTGCTGGCCGAAAGCCTGGAAACCCTGTTTGCCGTGGATGGCCGCCTT GCGCGGACGGTGCCTGACCTGCTGCTGCGGCCGGGGCGGATGACGCGGGCGTATCTGGATGGCCAGCGCATGCGCTTCAT TCCGCCCTTCCGGCTTTATGTGGTGGCCTCGCTGCTGTTCTTCGTGTTGCTGCCGCTGGTGACGGGGCAGGGCCTTTCGG TGGTGCCCGGCGGCGCGCAGAACTTCGACGAGGCGCGCGAGCAGATCGAGACAGCCTATGCCGACGGCGACATGACCGAC GCCGAATATCAGGAGGCGATTGCGGGCCTCACGGAAGTCGAGCGCCTCTGGCGCAGCGGCCCCACAAATCTCCTCACACC GGACGCTCCGACCCCGCCTGGCGAGACCGATGCGCCCGCCGCCGGCGACGAGAGTGAATGGGCTGGCTTCATGCCGGAAG AGGCGCTCGACGCCGTGCGCGCGGCGGGGGCGGAGGGCGACCCGGAAGCTGCGCGGTTTGCCGAGGTGATGGACAATCCC GGCCAGCTGGCCGAACAGACGCAGGAATGGATTCCGCGCATGATGTTCGTGCTGCTGCCGGTTTATGCCTGCCTTCTGGG TCTGGTGTATCTCTGGCGCCGGCAGTTCCTGTTCTATGACCATCTGATCGTATCGCTGCACTTCCATTCTGCCCTGTTCT TCTCGATGGCGATTGGCATGCTGGCGGCTTATGTGGTCGGCGTCGGCTGGGTGACCCTGGCGATCATCGTTTATTCCAAC TGGTATCTCTATCGCCTGAACCGGACCGTTTATGGCCGGGGGAGGTTCAGTTCGGTGCTCCGGGTGCTGACGCTCGACAG CATCTATTTCTGCATCCTCATGTCGGCGTTGCTGACGGCGGTGATCCTCGGGGCGTTGTCGCTGTGA
Upstream 100 bases:
>100_bases GGACTTGCGCCGGAGGGGCGGGCTTTGCGATATAATGAGGCTACGGCCCGCTTCATGGCGAAAAAGCCACGCGTGTTCCG CTGATCCGGGAGGGGAAGGC
Downstream 100 bases:
>100_bases TTGCTCCGGGGACCCTCCGCGCCGAAGCGCTGACGCTGCCTCACGCGGTTGAGCGGCCCCACTTCGACTGGGCGAGCTTT CGGGTAGACGCGCCGAAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 368; Mature: 367
Protein sequence:
>368_residues MSDSFESAADTAIEHAAADAAAGLARGRGTGADTHCRNCGAALEGDFCHVCGQSAQSVRRPFWALLAESLETLFAVDGRL ARTVPDLLLRPGRMTRAYLDGQRMRFIPPFRLYVVASLLFFVLLPLVTGQGLSVVPGGAQNFDEAREQIETAYADGDMTD AEYQEAIAGLTEVERLWRSGPTNLLTPDAPTPPGETDAPAAGDESEWAGFMPEEALDAVRAAGAEGDPEAARFAEVMDNP GQLAEQTQEWIPRMMFVLLPVYACLLGLVYLWRRQFLFYDHLIVSLHFHSALFFSMAIGMLAAYVVGVGWVTLAIIVYSN WYLYRLNRTVYGRGRFSSVLRVLTLDSIYFCILMSALLTAVILGALSL
Sequences:
>Translated_368_residues MSDSFESAADTAIEHAAADAAAGLARGRGTGADTHCRNCGAALEGDFCHVCGQSAQSVRRPFWALLAESLETLFAVDGRL ARTVPDLLLRPGRMTRAYLDGQRMRFIPPFRLYVVASLLFFVLLPLVTGQGLSVVPGGAQNFDEAREQIETAYADGDMTD AEYQEAIAGLTEVERLWRSGPTNLLTPDAPTPPGETDAPAAGDESEWAGFMPEEALDAVRAAGAEGDPEAARFAEVMDNP GQLAEQTQEWIPRMMFVLLPVYACLLGLVYLWRRQFLFYDHLIVSLHFHSALFFSMAIGMLAAYVVGVGWVTLAIIVYSN WYLYRLNRTVYGRGRFSSVLRVLTLDSIYFCILMSALLTAVILGALSL >Mature_367_residues SDSFESAADTAIEHAAADAAAGLARGRGTGADTHCRNCGAALEGDFCHVCGQSAQSVRRPFWALLAESLETLFAVDGRLA RTVPDLLLRPGRMTRAYLDGQRMRFIPPFRLYVVASLLFFVLLPLVTGQGLSVVPGGAQNFDEAREQIETAYADGDMTDA EYQEAIAGLTEVERLWRSGPTNLLTPDAPTPPGETDAPAAGDESEWAGFMPEEALDAVRAAGAEGDPEAARFAEVMDNPG QLAEQTQEWIPRMMFVLLPVYACLLGLVYLWRRQFLFYDHLIVSLHFHSALFFSMAIGMLAAYVVGVGWVTLAIIVYSNW YLYRLNRTVYGRGRFSSVLRVLTLDSIYFCILMSALLTAVILGALSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40265; Mature: 40133
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSFESAADTAIEHAAADAAAGLARGRGTGADTHCRNCGAALEGDFCHVCGQSAQSVRR CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCHHHHHCHHHHHHHH PFWALLAESLETLFAVDGRLARTVPDLLLRPGRMTRAYLDGQRMRFIPPFRLYVVASLLF HHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHCCCCEECCCHHHHHHHHHHHH FVLLPLVTGQGLSVVPGGAQNFDEAREQIETAYADGDMTDAEYQEAIAGLTEVERLWRSG HHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC PTNLLTPDAPTPPGETDAPAAGDESEWAGFMPEEALDAVRAAGAEGDPEAARFAEVMDNP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCC GQLAEQTQEWIPRMMFVLLPVYACLLGLVYLWRRQFLFYDHLIVSLHFHSALFFSMAIGM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAAYVVGVGWVTLAIIVYSNWYLYRLNRTVYGRGRFSSVLRVLTLDSIYFCILMSALLTA HHHHHHHHHHHHHHHHHHCCEEEEEECCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH VILGALSL HHHHHHCC >Mature Secondary Structure SDSFESAADTAIEHAAADAAAGLARGRGTGADTHCRNCGAALEGDFCHVCGQSAQSVRR CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCHHHHHCHHHHHHHH PFWALLAESLETLFAVDGRLARTVPDLLLRPGRMTRAYLDGQRMRFIPPFRLYVVASLLF HHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHCCCCEECCCHHHHHHHHHHHH FVLLPLVTGQGLSVVPGGAQNFDEAREQIETAYADGDMTDAEYQEAIAGLTEVERLWRSG HHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC PTNLLTPDAPTPPGETDAPAAGDESEWAGFMPEEALDAVRAAGAEGDPEAARFAEVMDNP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCC GQLAEQTQEWIPRMMFVLLPVYACLLGLVYLWRRQFLFYDHLIVSLHFHSALFFSMAIGM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAAYVVGVGWVTLAIIVYSNWYLYRLNRTVYGRGRFSSVLRVLTLDSIYFCILMSALLTA HHHHHHHHHHHHHHHHHHCCEEEEEECCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH VILGALSL HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA