Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
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Accession | NC_008358 |
Length | 3,705,021 |
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The map label for this gene is 114799691
Identifier: 114799691
GI number: 114799691
Start: 624799
End: 626178
Strand: Direct
Name: 114799691
Synonym: HNE_0624
Alternate gene names: NA
Gene position: 624799-626178 (Clockwise)
Preceding gene: 114797345
Following gene: 114798918
Centisome position: 16.86
GC content: 64.86
Gene sequence:
>1380_bases GTGACTGTATCGGACGGCAAGAGGAAAACAGAAGGGGGCTGGGAGGCGCCAGCGGGATGCGCTAGCACTCACCCCCTTAA CGGGCCTTTTTCCGGGTGTAATTTCATGTTCCGAGTTCTGCGCTGGATCGGCATCGTGCTACTGGCGGGCATCCTGCTGC TGATCGGGTCCAGCTGCACAATGCTGGGCCTCAACTATGCCAGCCTCGATATCGACAACAAGCCCGGCGCCACGCCCGCC ATAGATGTCTCCGCGCTGATCTCCGATCCGGCCGAGCGCGAGCGTCTCAAAGGCCTGTTGCAGGAAACCCTCTATGGCGC CTGGCCGGAAGACCTGCCGGTCTCGTTTGGCGACTGGCGCGTCATCGTCCCTGATTATCTCGAAGGGCGCGGTACGCTGG AAGAACTCGACATCACCATCGGCGCCGGCGATGGCGCGCGAACCTTTCAGCTGGTCGGCGCCTTTCCTTACGGAGCCGTG CAGGCGCCTGTGGTGATCGCCCAGACCTTCGGGTCCAACTGCGCCACCTTCCCGGAGCAGCCCGTCACCAGCATGGATGG CGACCCCTGCACCGTGCATGATTACGGGCCGATCCTCGGCTTCATCGTCTCGGCGGTGTTTGGCGAATATATCGCCGAAG CCCCGGTCGGGCTCTATTTTGATGCCGGGTTTGCCTATGCGAGCTTTCATGCGAGCGACTTCATTCCCGATGATGCAGAC GAAGCCGGCCCCGCCATTGACGGGCTGGGCGGTGATCCAAACCCCGGCAGCACGCTGATGGCCTGGGCTTATGGCTTCTC GGCAGCGATCACGGCGCTGGAAGCTGACGACCGGGTGGGCGAGGGGCGTATGGCGGTGCTCGGCCATTCCCGGCATGGCA AGGCGGCGCTGCTGGCGGCGGCCTGGGACCCGCGCATCGACGCCGTGATTGCCCACCAGTCCGGCTTTGCCGGCGCGGCG CTCTCGCGCTCTCCCTCGGGCGAGCGGCTGGACCGGATGGTAGAATCCTATCCCCACTGGCTGGCGCCGCAGGCGGCCCG CTATGCCGCAGCGCCCGACACTCTGCCGTTTGACCAGCACCACCTTCTGGCCCTGATCGCGCCCCGGCCCCTGTTCATGG GCAATGCCCGGCGGGACGTCTGGTCCGACCCCAATTCCAGCTACCGCGCTGCCATCGCCGCCAGCGAAGTCTGGAAGGCG TATGGGGAGACCGGCCTGAAGGATGACATCACCCATTTTGATCCGGCGGCCGATATTGCCTTCTTCCTGCGGCCGGGTGG GCACAGCATTGTGGATGACGACATCGCGGCGTTCCTGGCGTTTCTGTCGGCGCATATGGGCGAAACGGGCGAGTTGCCAA ACCGTATGACGGCGCCGTAG
Upstream 100 bases:
>100_bases CCAATCATGCCCGCCGCGAAGAAGGCAGACGCTGCGCCCGCTGCCAGACCCAGCACGCCGCCAATCAGAAGAGGAAGAAT CCGCATCCCTTCACGCTATC
Downstream 100 bases:
>100_bases TCTCTCCTGCAATAACAATGCTGTGGGAGGCTACACTTATGGAAATACCTGAAATCGAATTCCTCAAACCCGTCCTGGCG CTGGTGATCTGGACCTGCGT
Product: acetyl xylan esterase domain-containing protein
Products: NA
Alternate protein names: GDSL Family Lipase; Carbohydrate Esterase Family; Glycoside Hydrolase Family Protein; Acetyl Xylan Esterase Homolog; Cellulose 1 4-Beta-Cellobiosidase; Acetyl Xylan Esterase Domain-Containing Protein
Number of amino acids: Translated: 459; Mature: 458
Protein sequence:
>459_residues MTVSDGKRKTEGGWEAPAGCASTHPLNGPFSGCNFMFRVLRWIGIVLLAGILLLIGSSCTMLGLNYASLDIDNKPGATPA IDVSALISDPAERERLKGLLQETLYGAWPEDLPVSFGDWRVIVPDYLEGRGTLEELDITIGAGDGARTFQLVGAFPYGAV QAPVVIAQTFGSNCATFPEQPVTSMDGDPCTVHDYGPILGFIVSAVFGEYIAEAPVGLYFDAGFAYASFHASDFIPDDAD EAGPAIDGLGGDPNPGSTLMAWAYGFSAAITALEADDRVGEGRMAVLGHSRHGKAALLAAAWDPRIDAVIAHQSGFAGAA LSRSPSGERLDRMVESYPHWLAPQAARYAAAPDTLPFDQHHLLALIAPRPLFMGNARRDVWSDPNSSYRAAIAASEVWKA YGETGLKDDITHFDPAADIAFFLRPGGHSIVDDDIAAFLAFLSAHMGETGELPNRMTAP
Sequences:
>Translated_459_residues MTVSDGKRKTEGGWEAPAGCASTHPLNGPFSGCNFMFRVLRWIGIVLLAGILLLIGSSCTMLGLNYASLDIDNKPGATPA IDVSALISDPAERERLKGLLQETLYGAWPEDLPVSFGDWRVIVPDYLEGRGTLEELDITIGAGDGARTFQLVGAFPYGAV QAPVVIAQTFGSNCATFPEQPVTSMDGDPCTVHDYGPILGFIVSAVFGEYIAEAPVGLYFDAGFAYASFHASDFIPDDAD EAGPAIDGLGGDPNPGSTLMAWAYGFSAAITALEADDRVGEGRMAVLGHSRHGKAALLAAAWDPRIDAVIAHQSGFAGAA LSRSPSGERLDRMVESYPHWLAPQAARYAAAPDTLPFDQHHLLALIAPRPLFMGNARRDVWSDPNSSYRAAIAASEVWKA YGETGLKDDITHFDPAADIAFFLRPGGHSIVDDDIAAFLAFLSAHMGETGELPNRMTAP >Mature_458_residues TVSDGKRKTEGGWEAPAGCASTHPLNGPFSGCNFMFRVLRWIGIVLLAGILLLIGSSCTMLGLNYASLDIDNKPGATPAI DVSALISDPAERERLKGLLQETLYGAWPEDLPVSFGDWRVIVPDYLEGRGTLEELDITIGAGDGARTFQLVGAFPYGAVQ APVVIAQTFGSNCATFPEQPVTSMDGDPCTVHDYGPILGFIVSAVFGEYIAEAPVGLYFDAGFAYASFHASDFIPDDADE AGPAIDGLGGDPNPGSTLMAWAYGFSAAITALEADDRVGEGRMAVLGHSRHGKAALLAAAWDPRIDAVIAHQSGFAGAAL SRSPSGERLDRMVESYPHWLAPQAARYAAAPDTLPFDQHHLLALIAPRPLFMGNARRDVWSDPNSSYRAAIAASEVWKAY GETGLKDDITHFDPAADIAFFLRPGGHSIVDDDIAAFLAFLSAHMGETGELPNRMTAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48757; Mature: 48626
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVSDGKRKTEGGWEAPAGCASTHPLNGPFSGCNFMFRVLRWIGIVLLAGILLLIGSSCT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC MLGLNYASLDIDNKPGATPAIDVSALISDPAERERLKGLLQETLYGAWPEDLPVSFGDWR EEECCEEEEECCCCCCCCCCEEHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCE VIVPDYLEGRGTLEELDITIGAGDGARTFQLVGAFPYGAVQAPVVIAQTFGSNCATFPEQ EECCHHHCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCHHCCEEEEEHHCCCCCCCCCC PVTSMDGDPCTVHDYGPILGFIVSAVFGEYIAEAPVGLYFDAGFAYASFHASDFIPDDAD CCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEECCCCCCCCCCCH EAGPAIDGLGGDPNPGSTLMAWAYGFSAAITALEADDRVGEGRMAVLGHSRHGKAALLAA HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEECCCCCCCCCCEEEEECCCCCCEEEEEE AWDPRIDAVIAHQSGFAGAALSRSPSGERLDRMVESYPHWLAPQAARYAAAPDTLPFDQH CCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCC HLLALIAPRPLFMGNARRDVWSDPNSSYRAAIAASEVWKAYGETGLKDDITHFDPAADIA CEEEEECCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCEE FFLRPGGHSIVDDDIAAFLAFLSAHMGETGELPNRMTAP EEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure TVSDGKRKTEGGWEAPAGCASTHPLNGPFSGCNFMFRVLRWIGIVLLAGILLLIGSSCT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC MLGLNYASLDIDNKPGATPAIDVSALISDPAERERLKGLLQETLYGAWPEDLPVSFGDWR EEECCEEEEECCCCCCCCCCEEHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCE VIVPDYLEGRGTLEELDITIGAGDGARTFQLVGAFPYGAVQAPVVIAQTFGSNCATFPEQ EECCHHHCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCHHCCEEEEEHHCCCCCCCCCC PVTSMDGDPCTVHDYGPILGFIVSAVFGEYIAEAPVGLYFDAGFAYASFHASDFIPDDAD CCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEECCCCCCCCCCCH EAGPAIDGLGGDPNPGSTLMAWAYGFSAAITALEADDRVGEGRMAVLGHSRHGKAALLAA HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEECCCCCCCCCCEEEEECCCCCCEEEEEE AWDPRIDAVIAHQSGFAGAALSRSPSGERLDRMVESYPHWLAPQAARYAAAPDTLPFDQH CCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCC HLLALIAPRPLFMGNARRDVWSDPNSSYRAAIAASEVWKAYGETGLKDDITHFDPAADIA CEEEEECCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCEE FFLRPGGHSIVDDDIAAFLAFLSAHMGETGELPNRMTAP EEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA