Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
---|---|
Accession | NC_008358 |
Length | 3,705,021 |
Click here to switch to the map view.
The map label for this gene is 114799439
Identifier: 114799439
GI number: 114799439
Start: 2396245
End: 2397384
Strand: Direct
Name: 114799439
Synonym: HNE_2296
Alternate gene names: NA
Gene position: 2396245-2397384 (Clockwise)
Preceding gene: 114797783
Following gene: 114797865
Centisome position: 64.68
GC content: 64.12
Gene sequence:
>1140_bases ATGAGCCAGACCGTTCCCGCTACCGGCCTGCAACTGCGCAGCCTTGTCACCAAAGACGGCAAGCTGGAGCTTTCGCTCGC CGAAGTCGCCGTGCCTGAGCCCGGCCCCGATGATGTGGTCATCCAGATCGAGGCGACCCCGATCAACCCGTCCGACCTCG GCCTCCTCGTCGGCGGCGCTGACATGCGCACCGCCAAGGCATCCGGCACCAAGGACCGCCCCGTCATCACCGCGGATGTG CCCCCGCCCTCCCTGCGCGCCATGGCCGCGCGCCTCGACCTCTCCATGCCGGTCGGCAATGAAGGCGCCGGTGTCGTCGT GAAGGCAGGCTCATCGCCAGCCGCCCAAGCACTGCTCGGCAAGCGCGTCACCGGCCTTGGCGGCGAGATGTACGCCCAGT ACCGGATGCTGAACGTCGCCCAGGTGATGGAACTTCCCGCCGGCGCCAGCTCGCGCGATGGCGCCTCCTGCTTCGTGAAC CCGCTGACCGCGCTCTCCTTCGTGGAGACGATGCGTCTGGAGGGCCGCAAGGGCATCGTCCACACGGCGGCGGCCTCAAA CCTCGGCCAGATGCTGGTGAAGATCTGCCAGAAGGACAATGTTCCGCTGGTCAATGTCGTCCGCAAGAAAGAACAGGCCG ATCTCCTGAAAGGTCTCGGCGCGAAATACATCGTCGATTCGACGTCGCCAAATTTCATGGAAGAGCTGATCGTGGCTCTC GCTGAAACCGACACCACGCTTGGCTTTGATGCCATCGGCGGCGGCCCGCTCGCCGGCCAGCTGCTGATCGCCATGGAAGC GGCTGCCGCGCGCAAGATGAAAGAATTCAGCCGCTACGGCTCGGGCCAGGAAACGCAGGTCTACATCTACGGCCGGCTCG ACATGTCGCCGACCACCGTGCCGGCCGGCGTGGGTTTTGCGTGGAATATGTCAGGCTACCTGCTGACGCCGTTCCTTCAG AAAGCGGGCGCCGAAATCCGCGCCAAGATGCGCCAGCGCGTGATGGACGAACTGACCACCACGTTTGCCAGCCATTACAC AGCCGAAATCTCGCTCGCTGAAGCGCTCAATCTCGATACGCTCCACGCCTACAACGCCAAGGCGACGGGCACGAAGTATC TGATCAATCCGGCGAAGTAA
Upstream 100 bases:
>100_bases GGGCGATGAAATTCTTATTGATTACGAAGATTTTGCTGACGAGGCGCTCTGAGCTTCGCGGCAGGCCAAATGGCCAATCA AAAAAACTGGAGGAAAACAT
Downstream 100 bases:
>100_bases GGGGAAGGCTAACCAGCCCTCTCAGCTTTCGTCATCCCGGCTTCGCCGCAGGCGAAGACCGGGACCCCAGCCTGCGACGC TTCTGGGCCCCGGACATTGC
Product: zinc-binding dehydrogenase family oxidoreductase
Products: NA
Alternate protein names: Alcohol Dehydrogenase; Alcohol Dehydrogenase GroES Domain Protein; Alcohol Dehydrogenase GroES-Like Protein; NADPHQuinone Reductase; Alcohol Dehydrogenase GroES-Like Domain Family; Zn-Dependent; Alcohol Dehydrogenase GroES Domain-Containing Protein; Dehydrogenase/Oxidoreductase; NADH Oxidoreductas; Zn-Dependent Alcohol Dehydrogenase; Alcohol Dehydrogenase-Like Protein; Zn-Dependent Oxidoreductase; NADH Oxidoreductase-Like
Number of amino acids: Translated: 379; Mature: 378
Protein sequence:
>379_residues MSQTVPATGLQLRSLVTKDGKLELSLAEVAVPEPGPDDVVIQIEATPINPSDLGLLVGGADMRTAKASGTKDRPVITADV PPPSLRAMAARLDLSMPVGNEGAGVVVKAGSSPAAQALLGKRVTGLGGEMYAQYRMLNVAQVMELPAGASSRDGASCFVN PLTALSFVETMRLEGRKGIVHTAAASNLGQMLVKICQKDNVPLVNVVRKKEQADLLKGLGAKYIVDSTSPNFMEELIVAL AETDTTLGFDAIGGGPLAGQLLIAMEAAAARKMKEFSRYGSGQETQVYIYGRLDMSPTTVPAGVGFAWNMSGYLLTPFLQ KAGAEIRAKMRQRVMDELTTTFASHYTAEISLAEALNLDTLHAYNAKATGTKYLINPAK
Sequences:
>Translated_379_residues MSQTVPATGLQLRSLVTKDGKLELSLAEVAVPEPGPDDVVIQIEATPINPSDLGLLVGGADMRTAKASGTKDRPVITADV PPPSLRAMAARLDLSMPVGNEGAGVVVKAGSSPAAQALLGKRVTGLGGEMYAQYRMLNVAQVMELPAGASSRDGASCFVN PLTALSFVETMRLEGRKGIVHTAAASNLGQMLVKICQKDNVPLVNVVRKKEQADLLKGLGAKYIVDSTSPNFMEELIVAL AETDTTLGFDAIGGGPLAGQLLIAMEAAAARKMKEFSRYGSGQETQVYIYGRLDMSPTTVPAGVGFAWNMSGYLLTPFLQ KAGAEIRAKMRQRVMDELTTTFASHYTAEISLAEALNLDTLHAYNAKATGTKYLINPAK >Mature_378_residues SQTVPATGLQLRSLVTKDGKLELSLAEVAVPEPGPDDVVIQIEATPINPSDLGLLVGGADMRTAKASGTKDRPVITADVP PPSLRAMAARLDLSMPVGNEGAGVVVKAGSSPAAQALLGKRVTGLGGEMYAQYRMLNVAQVMELPAGASSRDGASCFVNP LTALSFVETMRLEGRKGIVHTAAASNLGQMLVKICQKDNVPLVNVVRKKEQADLLKGLGAKYIVDSTSPNFMEELIVALA ETDTTLGFDAIGGGPLAGQLLIAMEAAAARKMKEFSRYGSGQETQVYIYGRLDMSPTTVPAGVGFAWNMSGYLLTPFLQK AGAEIRAKMRQRVMDELTTTFASHYTAEISLAEALNLDTLHAYNAKATGTKYLINPAK
Specific function: Unknown
COG id: COG0604
COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40026; Mature: 39895
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQTVPATGLQLRSLVTKDGKLELSLAEVAVPEPGPDDVVIQIEATPINPSDLGLLVGGA CCCCCCCCCHHHHHHHCCCCCEEEEEEEEECCCCCCCCEEEEEEECCCCCCCCEEEEECC DMRTAKASGTKDRPVITADVPPPSLRAMAARLDLSMPVGNEGAGVVVKAGSSPAAQALLG CCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCEECCCCCCCCEEEEECCCCHHHHHHHH KRVTGLGGEMYAQYRMLNVAQVMELPAGASSRDGASCFVNPLTALSFVETMRLEGRKGIV HHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEE HTAAASNLGQMLVKICQKDNVPLVNVVRKKEQADLLKGLGAKYIVDSTSPNFMEELIVAL EHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHH AETDTTLGFDAIGGGPLAGQLLIAMEAAAARKMKEFSRYGSGQETQVYIYGRLDMSPTTV HHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCC PAGVGFAWNMSGYLLTPFLQKAGAEIRAKMRQRVMDELTTTFASHYTAEISLAEALNLDT CCCCCEEECCCCEEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHCCCCC LHAYNAKATGTKYLINPAK EEECCCCCCCCEEEEECCC >Mature Secondary Structure SQTVPATGLQLRSLVTKDGKLELSLAEVAVPEPGPDDVVIQIEATPINPSDLGLLVGGA CCCCCCCCHHHHHHHCCCCCEEEEEEEEECCCCCCCCEEEEEEECCCCCCCCEEEEECC DMRTAKASGTKDRPVITADVPPPSLRAMAARLDLSMPVGNEGAGVVVKAGSSPAAQALLG CCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCEECCCCCCCCEEEEECCCCHHHHHHHH KRVTGLGGEMYAQYRMLNVAQVMELPAGASSRDGASCFVNPLTALSFVETMRLEGRKGIV HHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEE HTAAASNLGQMLVKICQKDNVPLVNVVRKKEQADLLKGLGAKYIVDSTSPNFMEELIVAL EHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHH AETDTTLGFDAIGGGPLAGQLLIAMEAAAARKMKEFSRYGSGQETQVYIYGRLDMSPTTV HHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCC PAGVGFAWNMSGYLLTPFLQKAGAEIRAKMRQRVMDELTTTFASHYTAEISLAEALNLDT CCCCCEEECCCCEEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHCCCCC LHAYNAKATGTKYLINPAK EEECCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA