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The map label for this gene is ycdI [C]

Identifier: 114798999

GI number: 114798999

Start: 518090

End: 518689

Strand: Direct

Name: ycdI [C]

Synonym: HNE_0523

Alternate gene names: 114798999

Gene position: 518090-518689 (Clockwise)

Preceding gene: 114799747

Following gene: 114798173

Centisome position: 13.98

GC content: 61.83

Gene sequence:

>600_bases
ATGGCCCACCCGGTCAACGATCACGCGCTCGACATCATCTTCCGCGATGCCCGCAGCCAGAACGGCTATCTCGACCGGTC
GGTGCCCGAAGTGCTCATCCGCGCGGTGTATGACCTCGCCAAGATGGGCCCGACCAGCGCCAACTGTTCGCCGGCGCGTT
TCGTGTTCGTCACCACGCCGGAAGGGAAGGAGCGCCTCTTGCCCTTCATGAGCGCCGGCAACCGCGAGAAGACCGCCGCT
GCGCCCTGGACTGTCATCATGGCGTTCGACATGCGCTTTGCCGACAAGATCCCCCAGCTGTTCCCGCACAATCCGGATGC
AAAGCACTGGTTTGACAACAACACCGAAGAAACCGCCTTCCGGAACAGCACGCTGCAAGCGGCCTATCTGATGCTGGCGG
CCCGCTCGCTGGGGCTCGATTGCGGCCCGATGAGCGGCTTTGATGTGGCTGGGGTGAACCGCGAATTCTTCGAGAGCCAG
GAAGGCGAAGAGCAGCATTGGAAGGCCAACTTCATCTGCAATCTCGGCTATGGCGATAAGACCAAGATCATGGCCCGCTC
CCCGCGTCTGGAATTTGACGAGGGCTGCCGCATCCTCTAA

Upstream 100 bases:

>100_bases
CGGCCAAAAACTCTAACGGTTCTGCAGTCAAAAAATTCCGGCTCTGATCCCGGTGCCACCGCCGCGATCAAGAGCCGCCA
GCAAGGAAGGAACTGCCTCC

Downstream 100 bases:

>100_bases
CCGGCGCTGATGCTGATCCTTGCCCTGAACACTGCCTTCACCACGATGGAAGCCGCGCTGGTACGCGACGGCGAAATCCT
GGCCGATGCGCGCGAGACAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MAHPVNDHALDIIFRDARSQNGYLDRSVPEVLIRAVYDLAKMGPTSANCSPARFVFVTTPEGKERLLPFMSAGNREKTAA
APWTVIMAFDMRFADKIPQLFPHNPDAKHWFDNNTEETAFRNSTLQAAYLMLAARSLGLDCGPMSGFDVAGVNREFFESQ
EGEEQHWKANFICNLGYGDKTKIMARSPRLEFDEGCRIL

Sequences:

>Translated_199_residues
MAHPVNDHALDIIFRDARSQNGYLDRSVPEVLIRAVYDLAKMGPTSANCSPARFVFVTTPEGKERLLPFMSAGNREKTAA
APWTVIMAFDMRFADKIPQLFPHNPDAKHWFDNNTEETAFRNSTLQAAYLMLAARSLGLDCGPMSGFDVAGVNREFFESQ
EGEEQHWKANFICNLGYGDKTKIMARSPRLEFDEGCRIL
>Mature_198_residues
AHPVNDHALDIIFRDARSQNGYLDRSVPEVLIRAVYDLAKMGPTSANCSPARFVFVTTPEGKERLLPFMSAGNREKTAAA
PWTVIMAFDMRFADKIPQLFPHNPDAKHWFDNNTEETAFRNSTLQAAYLMLAARSLGLDCGPMSGFDVAGVNREFFESQE
GEEQHWKANFICNLGYGDKTKIMARSPRLEFDEGCRIL

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family. HadB/RutE subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787243, Length=202, Percent_Identity=50.990099009901, Blast_Score=202, Evalue=1e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 22410; Mature: 22278

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHPVNDHALDIIFRDARSQNGYLDRSVPEVLIRAVYDLAKMGPTSANCSPARFVFVTTP
CCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECC
EGKERLLPFMSAGNREKTAAAPWTVIMAFDMRFADKIPQLFPHNPDAKHWFDNNTEETAF
CCHHHHHHHHHCCCCCCCCCCCEEEEEEECHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH
RNSTLQAAYLMLAARSLGLDCGPMSGFDVAGVNREFFESQEGEEQHWKANFICNLGYGDK
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEEEECCCCCC
TKIMARSPRLEFDEGCRIL
CEEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
AHPVNDHALDIIFRDARSQNGYLDRSVPEVLIRAVYDLAKMGPTSANCSPARFVFVTTP
CCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECC
EGKERLLPFMSAGNREKTAAAPWTVIMAFDMRFADKIPQLFPHNPDAKHWFDNNTEETAF
CCHHHHHHHHHCCCCCCCCCCCEEEEEEECHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH
RNSTLQAAYLMLAARSLGLDCGPMSGFDVAGVNREFFESQEGEEQHWKANFICNLGYGDK
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEEEECCCCCC
TKIMARSPRLEFDEGCRIL
CEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Fmn (Potential) [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA