Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is 114798856

Identifier: 114798856

GI number: 114798856

Start: 650025

End: 650420

Strand: Direct

Name: 114798856

Synonym: HNE_0645

Alternate gene names: NA

Gene position: 650025-650420 (Clockwise)

Preceding gene: 114798727

Following gene: 114798318

Centisome position: 17.54

GC content: 66.92

Gene sequence:

>396_bases
GTGCTACGGGCTGTAGCGAAGGAAATCCAGATGAAACGCTCTGCGCGCGTGCCTATTCTGCCCTGTCTTATCGCCGCACT
GCCCGTGTGGCTCGCCGCATGCGCGAGCGATCTGGCGCAGGGATACCGCTCCACACCGGACTATCCGGCCTATTCAGCCG
CCACCTGCACCAGCGTTACCGCCACCCAGGCGCTGAACGAGGCGGCCGAAAATGATGTCGAGCGGGGCACAGGCATGAAC
CTCAAGGGCACGGGCCCAAGCGGGGATGACATGTTCGGCGGGCTTCTGATGGCCTTTGTGTTTGCGCTGGCCGAGGAGCG
CCCGCCGGGCCTCTCCGACGCCTGCGCCGGGGTCGGCGCCGCCCAGGCGGCCTCTACCCGCCGTGAGGGTTACTGA

Upstream 100 bases:

>100_bases
CGGTCAAACGGCTGCCCGATAGCAGGGAGTCGGGCGCGGGGGCAAGGCGCAAGGTGCGTGGAACACCCCCGATACAGGGG
GAAGCACGCTGCCTTGCGCG

Downstream 100 bases:

>100_bases
CGCCTGCCATGCAGCCCCAAATCGAGATCTCAGGAGAGACACCCATGCAAACCCCGCCCAACCTGTTCATCCTCTACACG
CTGAAACAAGGTGTCAGCCC

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MLRAVAKEIQMKRSARVPILPCLIAALPVWLAACASDLAQGYRSTPDYPAYSAATCTSVTATQALNEAAENDVERGTGMN
LKGTGPSGDDMFGGLLMAFVFALAEERPPGLSDACAGVGAAQAASTRREGY

Sequences:

>Translated_131_residues
MLRAVAKEIQMKRSARVPILPCLIAALPVWLAACASDLAQGYRSTPDYPAYSAATCTSVTATQALNEAAENDVERGTGMN
LKGTGPSGDDMFGGLLMAFVFALAEERPPGLSDACAGVGAAQAASTRREGY
>Mature_131_residues
MLRAVAKEIQMKRSARVPILPCLIAALPVWLAACASDLAQGYRSTPDYPAYSAATCTSVTATQALNEAAENDVERGTGMN
LKGTGPSGDDMFGGLLMAFVFALAEERPPGLSDACAGVGAAQAASTRREGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13586; Mature: 13586

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRAVAKEIQMKRSARVPILPCLIAALPVWLAACASDLAQGYRSTPDYPAYSAATCTSVT
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
ATQALNEAAENDVERGTGMNLKGTGPSGDDMFGGLLMAFVFALAEERPPGLSDACAGVGA
HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCH
AQAASTRREGY
HHHHHHHCCCC
>Mature Secondary Structure
MLRAVAKEIQMKRSARVPILPCLIAALPVWLAACASDLAQGYRSTPDYPAYSAATCTSVT
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
ATQALNEAAENDVERGTGMNLKGTGPSGDDMFGGLLMAFVFALAEERPPGLSDACAGVGA
HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCH
AQAASTRREGY
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA