| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114798761
Identifier: 114798761
GI number: 114798761
Start: 3144352
End: 3145239
Strand: Reverse
Name: 114798761
Synonym: HNE_2987
Alternate gene names: NA
Gene position: 3145239-3144352 (Counterclockwise)
Preceding gene: 114799148
Following gene: 114798584
Centisome position: 84.89
GC content: 62.27
Gene sequence:
>888_bases ATGAAACGCCTTCTCCTCACCGCTTCGATGGCTGCGCTCCTGCTGGCAGCGTGCGCCCCCAAAACGGAAACGCCCGCCGA TGCAGGCGCAAGCGAAGGCGCGCCGGTTGTGGAGACGGCATCTTCAGAAACCGCTGAGCCAGGCCCGCTGCCCGCTGATC TCGGCAGCCCCGCTTTCGAGGAAACCGCCGAAGAATACGAAATCCGCGCGGTCGTCGATCCGCAGATCGTCGCCTTCGAT GAAGCGCTCGCACAGATGTATTTCACGTCTGCCCGCGCCTCACTCGACGCCCTGAAGGAACAGGCGGTCAATGACAGCAA GGCCGCCGCAGAACAGGCCGCCGCCAATGGCACGGAAAACTGGTTCCGGTCCTATTTCATGGAATTCCGTTTCGAGGCGA CGGCATCTGAAGGCGATATCATCAGCGTGCTGCAGACGGTCTCCAGCTATACCGGAGGCGCCCATCCCAACCACGCTCTC AAGGGCATGGTGCAGCAGCGGAACGTGGAAAATCCCATCCCCATCAGCGCCGTGGTTGCAGATACCGCCGCTTTCGGCGA ACGCCTCAAATCCTATCTGACAGACCAAAAGATCGCGCGCGCCCAGAACGATCCTGCCCGCGACCAGGTCACAGCTGAAG TCGAGGAAATTCTGGGAGACAACGCAAATGCCGGCTCTGTCTGGGGCGCCAATTACATACTCGCGCGCTCAACCGAGGCC GGCAAGTTCGGCGGCATCACCGTGCTCTTTTCGCCCTATGATGTCGGCCCGTATGCGGAAGGCGCCTATGACATCACCGT CCCGGCCAGCGACCTGAGCGGAATGCTCACGCCGGACTGGACCGCCCGCTTTGGCGGCGAGCCTGTCCCTCTGGCCGCGC CGCTTTAA
Upstream 100 bases:
>100_bases ACATTATCTCCATCGTTTCGCCACGGAGCGCGTGGTAAGTGTCAACATCACCGCCCAGGGCGGCGATCCGGAACTGCTCA GCCTCTAAGGAACGAACCGC
Downstream 100 bases:
>100_bases GGCCCGCGCCTAGCAGCGGCGGAAGTTGAACACCTGCATCTGGTCGCCGTTCATCCGGGAGATCGTCGCCGTCATCCGGC GGCCATCGCGCGTATAGGTG
Product: putative lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MKRLLLTASMAALLLAACAPKTETPADAGASEGAPVVETASSETAEPGPLPADLGSPAFEETAEEYEIRAVVDPQIVAFD EALAQMYFTSARASLDALKEQAVNDSKAAAEQAAANGTENWFRSYFMEFRFEATASEGDIISVLQTVSSYTGGAHPNHAL KGMVQQRNVENPIPISAVVADTAAFGERLKSYLTDQKIARAQNDPARDQVTAEVEEILGDNANAGSVWGANYILARSTEA GKFGGITVLFSPYDVGPYAEGAYDITVPASDLSGMLTPDWTARFGGEPVPLAAPL
Sequences:
>Translated_295_residues MKRLLLTASMAALLLAACAPKTETPADAGASEGAPVVETASSETAEPGPLPADLGSPAFEETAEEYEIRAVVDPQIVAFD EALAQMYFTSARASLDALKEQAVNDSKAAAEQAAANGTENWFRSYFMEFRFEATASEGDIISVLQTVSSYTGGAHPNHAL KGMVQQRNVENPIPISAVVADTAAFGERLKSYLTDQKIARAQNDPARDQVTAEVEEILGDNANAGSVWGANYILARSTEA GKFGGITVLFSPYDVGPYAEGAYDITVPASDLSGMLTPDWTARFGGEPVPLAAPL >Mature_295_residues MKRLLLTASMAALLLAACAPKTETPADAGASEGAPVVETASSETAEPGPLPADLGSPAFEETAEEYEIRAVVDPQIVAFD EALAQMYFTSARASLDALKEQAVNDSKAAAEQAAANGTENWFRSYFMEFRFEATASEGDIISVLQTVSSYTGGAHPNHAL KGMVQQRNVENPIPISAVVADTAAFGERLKSYLTDQKIARAQNDPARDQVTAEVEEILGDNANAGSVWGANYILARSTEA GKFGGITVLFSPYDVGPYAEGAYDITVPASDLSGMLTPDWTARFGGEPVPLAAPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31084; Mature: 31084
Theoretical pI: Translated: 4.05; Mature: 4.05
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLLLTASMAALLLAACAPKTETPADAGASEGAPVVETASSETAEPGPLPADLGSPAFE CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHH ETAEEYEIRAVVDPQIVAFDEALAQMYFTSARASLDALKEQAVNDSKAAAEQAAANGTEN HHHHHEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHH WFRSYFMEFRFEATASEGDIISVLQTVSSYTGGAHPNHALKGMVQQRNVENPIPISAVVA HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHH DTAAFGERLKSYLTDQKIARAQNDPARDQVTAEVEEILGDNANAGSVWGANYILARSTEA HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCC GKFGGITVLFSPYDVGPYAEGAYDITVPASDLSGMLTPDWTARFGGEPVPLAAPL CCCCCEEEEECCCCCCCCCCCCEEEEECHHHHCCCCCCCCHHHCCCCCCCCCCCC >Mature Secondary Structure MKRLLLTASMAALLLAACAPKTETPADAGASEGAPVVETASSETAEPGPLPADLGSPAFE CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHH ETAEEYEIRAVVDPQIVAFDEALAQMYFTSARASLDALKEQAVNDSKAAAEQAAANGTEN HHHHHEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHH WFRSYFMEFRFEATASEGDIISVLQTVSSYTGGAHPNHALKGMVQQRNVENPIPISAVVA HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHH DTAAFGERLKSYLTDQKIARAQNDPARDQVTAEVEEILGDNANAGSVWGANYILARSTEA HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCC GKFGGITVLFSPYDVGPYAEGAYDITVPASDLSGMLTPDWTARFGGEPVPLAAPL CCCCCEEEEECCCCCCCCCCCCEEEEECHHHHCCCCCCCCHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA