| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is panC
Identifier: 114798508
GI number: 114798508
Start: 1137984
End: 1138865
Strand: Reverse
Name: panC
Synonym: HNE_1126
Alternate gene names: 114798508
Gene position: 1138865-1137984 (Counterclockwise)
Preceding gene: 114798957
Following gene: 114797423
Centisome position: 30.74
GC content: 62.81
Gene sequence:
>882_bases GTGAATTCCACGAAAGAAAACCCGGTCGAAATAATCCGTACCCGAAACGAGCTGCAAGCCCGTGTACGCGCGTGGAAACA GGCCGGTGAAACCGTTGGTTTCGTCCCCACCATGGGGGCGCTGCATGAAGGGCATCTCTCGCTCATTGAAAAAGCTCAGG AAAAGGTCACGCGCACCGTGGCGAGCATTTTCGTTAACCCGGCGCAGTTCGCCCCTGGCGAGGATTTCGACACCTATCCG CGCCGCGAGGGCGAAGACATTGCCAAGCTGGCGAGCGTAAACTGTGACGCGGTTTACCTGCCCACTGTTGCAGAAATGTA TCCCGAAGGATCGGTCACGAATGTGCGGGTCGAATCGCTGTCGGACCTGCTGGACGGGATTTACCGGCCGCACTTCTTCT ATGGAGTGGCGACGGTGGTGGCGCGCCTCTTCCTGCATGCGCAGCCGGACGTGGCCGTATTCGGCGAGAAGGATTACCAG CAGCTGCAGGTGATCCGCCGGATGGTGCGGGATCTGGGATTCCCGATCGAGATCATCGGCGGGGCAACCCGGCGGGACGC CGACGGGCTGGCCCAGTCTTCCCGCAATCTTTATCTTTCCCCGGACGAACGCAGGGCGGCGGGCGCGATCTATTCGGCCA TGCACCGCGCCGCCAGCCGCATGGCGCTTGGCACCCTCCCCTCAGAGGCGCTGAAGGAGGCGGAGGGCTACATCCTCACC GCCGGCTTCCGGAAGATCGACTATGTGACGCTGGTGGACCCGGCAACGCTACAGGCCCTGCCCGCAGATACGCCGCTAGA AGACGGCGCAGCCGCGCGGCTGCTGGCAGCGGCATGGATCGGCAAGACGCGGCTGATCGACAATATCAGCGTGACGCGGT GA
Upstream 100 bases:
>100_bases CGAGCGGAGAGTGGTCAGGATGCGCTGGGTCATGTCTGTAAAATTCCCGCTTATGGGTTAACAACGCATTAACTTCATCA AGAAGCAGGGCATCTGAAAA
Downstream 100 bases:
>100_bases AGGCTTTCAGGGCGTCCAGGAAACGCTGATTGTCGTCTGCGCTGCCCACCGAGATACGCAGCTTGGTGGGCAGGCCATAA CCGCCGATGGCGCGCACGAG
Product: pantoate--beta-alanine ligase
Products: NA
Alternate protein names: PS; Pantoate--beta-alanine ligase; Pantoate-activating enzyme
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MNSTKENPVEIIRTRNELQARVRAWKQAGETVGFVPTMGALHEGHLSLIEKAQEKVTRTVASIFVNPAQFAPGEDFDTYP RREGEDIAKLASVNCDAVYLPTVAEMYPEGSVTNVRVESLSDLLDGIYRPHFFYGVATVVARLFLHAQPDVAVFGEKDYQ QLQVIRRMVRDLGFPIEIIGGATRRDADGLAQSSRNLYLSPDERRAAGAIYSAMHRAASRMALGTLPSEALKEAEGYILT AGFRKIDYVTLVDPATLQALPADTPLEDGAAARLLAAAWIGKTRLIDNISVTR
Sequences:
>Translated_293_residues MNSTKENPVEIIRTRNELQARVRAWKQAGETVGFVPTMGALHEGHLSLIEKAQEKVTRTVASIFVNPAQFAPGEDFDTYP RREGEDIAKLASVNCDAVYLPTVAEMYPEGSVTNVRVESLSDLLDGIYRPHFFYGVATVVARLFLHAQPDVAVFGEKDYQ QLQVIRRMVRDLGFPIEIIGGATRRDADGLAQSSRNLYLSPDERRAAGAIYSAMHRAASRMALGTLPSEALKEAEGYILT AGFRKIDYVTLVDPATLQALPADTPLEDGAAARLLAAAWIGKTRLIDNISVTR >Mature_293_residues MNSTKENPVEIIRTRNELQARVRAWKQAGETVGFVPTMGALHEGHLSLIEKAQEKVTRTVASIFVNPAQFAPGEDFDTYP RREGEDIAKLASVNCDAVYLPTVAEMYPEGSVTNVRVESLSDLLDGIYRPHFFYGVATVVARLFLHAQPDVAVFGEKDYQ QLQVIRRMVRDLGFPIEIIGGATRRDADGLAQSSRNLYLSPDERRAAGAIYSAMHRAASRMALGTLPSEALKEAEGYILT AGFRKIDYVTLVDPATLQALPADTPLEDGAAARLLAAAWIGKTRLIDNISVTR
Specific function: Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
COG id: COG0414
COG function: function code H; Panthothenate synthetase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pantothenate synthetase family
Homologues:
Organism=Escherichia coli, GI1786325, Length=284, Percent_Identity=42.6056338028169, Blast_Score=213, Evalue=9e-57, Organism=Saccharomyces cerevisiae, GI6322046, Length=303, Percent_Identity=37.953795379538, Blast_Score=174, Evalue=1e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PANC_HYPNA (Q0C347)
Other databases:
- EMBL: CP000158 - RefSeq: YP_759846.1 - STRING: Q0C347 - GeneID: 4287761 - GenomeReviews: CP000158_GR - KEGG: hne:HNE_1126 - NMPDR: fig|228405.5.peg.1096 - TIGR: HNE_1126 - eggNOG: COG0414 - HOGENOM: HBG428839 - OMA: EDFGSYP - PhylomeDB: Q0C347 - ProtClustDB: PRK00380 - BioCyc: HNEP81032:HNE_1126-MONOMER - GO: GO:0005737 - HAMAP: MF_00158 - InterPro: IPR003721 - InterPro: IPR014729 - Gene3D: G3DSA:3.40.50.620 - PANTHER: PTHR21299:SF1 - TIGRFAMs: TIGR00018
Pfam domain/function: PF02569 Pantoate_ligase
EC number: =6.3.2.1
Molecular weight: Translated: 32189; Mature: 32189
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: NA
Important sites: ACT_SITE 45-45 BINDING 69-69 BINDING 69-69 BINDING 161-161
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSTKENPVEIIRTRNELQARVRAWKQAGETVGFVPTMGALHEGHLSLIEKAQEKVTRTV CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH ASIFVNPAQFAPGEDFDTYPRREGEDIAKLASVNCDAVYLPTVAEMYPEGSVTNVRVESL HHHHCCCHHCCCCCCCCCCCCCCCHHHHHHHHCCCCEEECCHHHHHCCCCCCCEEEHHHH SDLLDGIYRPHFFYGVATVVARLFLHAQPDVAVFGEKDYQQLQVIRRMVRDLGFPIEIIG HHHHHHHHCHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHCCCCEEEEC GATRRDADGLAQSSRNLYLSPDERRAAGAIYSAMHRAASRMALGTLPSEALKEAEGYILT CCCCCCHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCEEEE AGFRKIDYVTLVDPATLQALPADTPLEDGAAARLLAAAWIGKTRLIDNISVTR CCCCEEEEEEEECCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNSTKENPVEIIRTRNELQARVRAWKQAGETVGFVPTMGALHEGHLSLIEKAQEKVTRTV CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH ASIFVNPAQFAPGEDFDTYPRREGEDIAKLASVNCDAVYLPTVAEMYPEGSVTNVRVESL HHHHCCCHHCCCCCCCCCCCCCCCHHHHHHHHCCCCEEECCHHHHHCCCCCCCEEEHHHH SDLLDGIYRPHFFYGVATVVARLFLHAQPDVAVFGEKDYQQLQVIRRMVRDLGFPIEIIG HHHHHHHHCHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHCCCCEEEEC GATRRDADGLAQSSRNLYLSPDERRAAGAIYSAMHRAASRMALGTLPSEALKEAEGYILT CCCCCCHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCEEEE AGFRKIDYVTLVDPATLQALPADTPLEDGAAARLLAAAWIGKTRLIDNISVTR CCCCEEEEEEEECCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA