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The map label for this gene is 114798395

Identifier: 114798395

GI number: 114798395

Start: 910413

End: 911084

Strand: Reverse

Name: 114798395

Synonym: HNE_0891

Alternate gene names: NA

Gene position: 911084-910413 (Counterclockwise)

Preceding gene: 114797611

Following gene: 114797782

Centisome position: 24.59

GC content: 62.65

Gene sequence:

>672_bases
ATGGACACTTCTGTTTTTCTTGATATTGGAACGGGGCTGAAATGGCTGGGCCTTCTCAGCCTGCCGCTGTTTCTCGTGCC
ACTGATTGCGCTGAGCGCGCCGCGCCTTGTTGACGGGTTTGCGCTGAAGCTCAGCTGGCTGATTGACAAGGTGACGGGCA
TTGCGCTGGGCGCGGCGATTGCGAGCTCCCTGATCCTTGTCTTCTCGATGCTGGCCATCGTGATCCTGCGCTACACGTTT
TCGCTTTCCTTCAGCTGGCTGAACGAGATCACGACTTACAGCTTTGCCGCGATGTTCATGCTGGGCGCCGCCGCCGCCCT
GAGAGACGGGGCGCATGTGCGCGTTGACATCCTGCGCCCGCGCTTTGGCGAGACGGGGCGAAACTGGGTGGAGCTGACGG
GCATATACCTCTTCCTTTTCCCGATCTGCGTACGCATCCTGATGACAAGCGAGGCGGGGCTGGCGCGCGCCTGGCTGCTG
CTGGAAGGCTCGCGGGAATCCGATGGCCTGCCGATCTTCTTCCTCTTCAAGACGCTGGTGCCGGTGTTTGCCGCGCTGCT
GATGGCGCAGGGGCTTTCCGAAGCGATCAAGGCCGCCCTGCGCATCACCGGCGCACTACCGCCGGAGACGCCACAGCAGC
TGGCAGCGGAGGGAGGCGGCCATGGAGCTTGA

Upstream 100 bases:

>100_bases
CGAGAAATCCCTGAAACTGATGCGGGGCTGGGCCGGGGTTTCGGACGGGGTGTATTACACCGCCCGCGCGCTCGGCAAGT
AAGCGGCGCCGGGGCGGGCA

Downstream 100 bases:

>100_bases
GGCGATCCTTGCCATCTCGATGTTCATTTTTGCCATCGGCGCGCTGCTGGCAGGCTATCCCGTTGCGCTGACCCTGGGCG
GGGTGGCGCTGATCTTTGCC

Product: TRAP transporter, DctQ-like membrane protein

Products: NA

Alternate protein names: TRAP Transporter DctQ-Like Membrane Protein; Permease; C4-Dicarboxylate Transporter Family Protein DctQ Subunit; Trap-Type Transport System Small Permease Component; Tripartite Transporter Small Subunit; TRAP Transporter Small Transmembrane Protein; TRAP Transporter DctQ-Like Membrane Protein Family; TRAP-Type Transport System Small Permease Component

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MDTSVFLDIGTGLKWLGLLSLPLFLVPLIALSAPRLVDGFALKLSWLIDKVTGIALGAAIASSLILVFSMLAIVILRYTF
SLSFSWLNEITTYSFAAMFMLGAAAALRDGAHVRVDILRPRFGETGRNWVELTGIYLFLFPICVRILMTSEAGLARAWLL
LEGSRESDGLPIFFLFKTLVPVFAALLMAQGLSEAIKAALRITGALPPETPQQLAAEGGGHGA

Sequences:

>Translated_223_residues
MDTSVFLDIGTGLKWLGLLSLPLFLVPLIALSAPRLVDGFALKLSWLIDKVTGIALGAAIASSLILVFSMLAIVILRYTF
SLSFSWLNEITTYSFAAMFMLGAAAALRDGAHVRVDILRPRFGETGRNWVELTGIYLFLFPICVRILMTSEAGLARAWLL
LEGSRESDGLPIFFLFKTLVPVFAALLMAQGLSEAIKAALRITGALPPETPQQLAAEGGGHGA
>Mature_223_residues
MDTSVFLDIGTGLKWLGLLSLPLFLVPLIALSAPRLVDGFALKLSWLIDKVTGIALGAAIASSLILVFSMLAIVILRYTF
SLSFSWLNEITTYSFAAMFMLGAAAALRDGAHVRVDILRPRFGETGRNWVELTGIYLFLFPICVRILMTSEAGLARAWLL
LEGSRESDGLPIFFLFKTLVPVFAALLMAQGLSEAIKAALRITGALPPETPQQLAAEGGGHGA

Specific function: Unknown

COG id: COG4665

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, small permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24012; Mature: 24012

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTSVFLDIGTGLKWLGLLSLPLFLVPLIALSAPRLVDGFALKLSWLIDKVTGIALGAAI
CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ASSLILVFSMLAIVILRYTFSLSFSWLNEITTYSFAAMFMLGAAAALRDGAHVRVDILRP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC
RFGETGRNWVELTGIYLFLFPICVRILMTSEAGLARAWLLLEGSRESDGLPIFFLFKTLV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHEEECCCCCCCCCHHHHHHHHH
PVFAALLMAQGLSEAIKAALRITGALPPETPQQLAAEGGGHGA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCC
>Mature Secondary Structure
MDTSVFLDIGTGLKWLGLLSLPLFLVPLIALSAPRLVDGFALKLSWLIDKVTGIALGAAI
CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ASSLILVFSMLAIVILRYTFSLSFSWLNEITTYSFAAMFMLGAAAALRDGAHVRVDILRP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC
RFGETGRNWVELTGIYLFLFPICVRILMTSEAGLARAWLLLEGSRESDGLPIFFLFKTLV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHEEECCCCCCCCCHHHHHHHHH
PVFAALLMAQGLSEAIKAALRITGALPPETPQQLAAEGGGHGA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA