Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
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Accession | NC_008358 |
Length | 3,705,021 |
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The map label for this gene is 114798394
Identifier: 114798394
GI number: 114798394
Start: 3387065
End: 3387520
Strand: Reverse
Name: 114798394
Synonym: HNE_3216
Alternate gene names: NA
Gene position: 3387520-3387065 (Counterclockwise)
Preceding gene: 114798959
Following gene: 114799548
Centisome position: 91.43
GC content: 59.43
Gene sequence:
>456_bases ATGCGAACATTCCTGATTTCAATTGCCTGTGCCGGGCTGGCCGCCTGTTCGGCAGGTGATCCGTCGGCGTTGACGGCCTC CCTGCAATCTGACCCCCCTGGACCCGGCCATGAAATCGGCGGTAGCGTTGATAGCGTGGATTATGACGCTTCCTCCGGCA CAGTCACGATTAGCGGCTGGCACATGTTCACCCCGGAAACAAAGCAGCAGGATCTGAAAGTCTATGCCGACACGGCCGTG TCCGTCGCCAGTGTTTCCCGCTTTGAGCGGCCCGATGTTGTCGATGCGGTCGGAAATGAAGATCTCAAGGATGCTGGGTT CACGCTGGTGCTCAAAACGGACCCCGGCGCGCCTTTGACAGAACTCTGCATCTCGATGACAGACAAACACTACGGCGCGC GCATTCTGCATCCGGTCTCGCGCGAGCAGGTCCGCTGCGCTTCAGTCGGCCAGTAA
Upstream 100 bases:
>100_bases GCAAAGTGTGACGAAAGCTTCATCCAGCTGGGTGCTTCCCGGCAGACGCCGGGTTGGGCTAGAGGTGCGCCTCCCAGATT GGAAAGAGGCGAAACTCCTG
Downstream 100 bases:
>100_bases TGCGGGGGCGGTAATGCGAGGGCCTGTCATTGAAACCCAGCGTTTGATCCTGCGCCCTCCGCAAGCGGAGGACTTCGCCG GATTCTGTGCCCTCGCTGCA
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MRTFLISIACAGLAACSAGDPSALTASLQSDPPGPGHEIGGSVDSVDYDASSGTVTISGWHMFTPETKQQDLKVYADTAV SVASVSRFERPDVVDAVGNEDLKDAGFTLVLKTDPGAPLTELCISMTDKHYGARILHPVSREQVRCASVGQ
Sequences:
>Translated_151_residues MRTFLISIACAGLAACSAGDPSALTASLQSDPPGPGHEIGGSVDSVDYDASSGTVTISGWHMFTPETKQQDLKVYADTAV SVASVSRFERPDVVDAVGNEDLKDAGFTLVLKTDPGAPLTELCISMTDKHYGARILHPVSREQVRCASVGQ >Mature_151_residues MRTFLISIACAGLAACSAGDPSALTASLQSDPPGPGHEIGGSVDSVDYDASSGTVTISGWHMFTPETKQQDLKVYADTAV SVASVSRFERPDVVDAVGNEDLKDAGFTLVLKTDPGAPLTELCISMTDKHYGARILHPVSREQVRCASVGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15811; Mature: 15811
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTFLISIACAGLAACSAGDPSALTASLQSDPPGPGHEIGGSVDSVDYDASSGTVTISGW CCEEEEEEHHHHHHHCCCCCCHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE HMFTPETKQQDLKVYADTAVSVASVSRFERPDVVDAVGNEDLKDAGFTLVLKTDPGAPLT EEECCCCCCCCEEEEECHHHHHHHHHHCCCCCHHHHCCCCCCCCCCEEEEEEECCCCCHH ELCISMTDKHYGARILHPVSREQVRCASVGQ HHHHHHHCCCCCCEEECCCCCCCCCCCCCCC >Mature Secondary Structure MRTFLISIACAGLAACSAGDPSALTASLQSDPPGPGHEIGGSVDSVDYDASSGTVTISGW CCEEEEEEHHHHHHHCCCCCCHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE HMFTPETKQQDLKVYADTAVSVASVSRFERPDVVDAVGNEDLKDAGFTLVLKTDPGAPLT EEECCCCCCCCEEEEECHHHHHHHHHHCCCCCHHHHCCCCCCCCCCEEEEEEECCCCCHH ELCISMTDKHYGARILHPVSREQVRCASVGQ HHHHHHHCCCCCCEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA