Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is 114798084

Identifier: 114798084

GI number: 114798084

Start: 3324716

End: 3325267

Strand: Reverse

Name: 114798084

Synonym: HNE_3144

Alternate gene names: NA

Gene position: 3325267-3324716 (Counterclockwise)

Preceding gene: 114797132

Following gene: 114798578

Centisome position: 89.75

GC content: 59.6

Gene sequence:

>552_bases
ATGGACAAGCGTGCCAAATTCCAGAAGCCAGAGATGCCAGACGAGTTTGTCGATCTTGAGTATGACCTGCACCGTGTCGA
AGCGAGCCGGGGCGTACTTGAGATTGCCGTGCGGCAGCTGCGGGCTTTTGCGCGTTGCATGACGGCTAGCAAATCGGAAG
CCGATGAGCTGGTTGAGGACACGCTGATGCTGTTCCTTGCAGAAGACCGTGTGCTGCGGGAGTGCGATACCTGTTTTGCC
GAGCTGCTGGAGGTGTTCCGGAGGGTGCATGGCCGCACAGTATTGATCCAGGCTTCCCGAGGGGCTCCGGACAAGGAGTA
TGCCGGGTTCATGCAGATTGCCTTGCCGGAGCGGGAAGTGGCGGCGCTGGTGATCGGCGGGGGAATGATGCCGGCCCAAG
CCGCAGAACTGCTCAAGCTGTCGCCGACCCAAACCGAGGCATTGCTTGAGACAGCCCGGCGGAAACTGGGCCCTACAAGT
TTGCCTGAGTGGCCATTTCTGCCTGCAAGTGCTAGCGAGTATCTGTTGAACGAGGGCGGCAACATCGGTTGA

Upstream 100 bases:

>100_bases
CTGGGAATTCAGCTAAAGGTTTCCCGAATTCTAGCCGCAGTTTAACCTTTTAGACCATTCGGAAACGGAGCTGTAGCAAA
TGGTATGATCTGGTGGCCAG

Downstream 100 bases:

>100_bases
CGCGCCTTTTCGGCGCGAAGGGGAACGATGTGGCTGATGATCAGGCATTCTTCCAGGATCATCCTGATGCCGCACTGATC
GTTGACCCGGTAACCCGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MDKRAKFQKPEMPDEFVDLEYDLHRVEASRGVLEIAVRQLRAFARCMTASKSEADELVEDTLMLFLAEDRVLRECDTCFA
ELLEVFRRVHGRTVLIQASRGAPDKEYAGFMQIALPEREVAALVIGGGMMPAQAAELLKLSPTQTEALLETARRKLGPTS
LPEWPFLPASASEYLLNEGGNIG

Sequences:

>Translated_183_residues
MDKRAKFQKPEMPDEFVDLEYDLHRVEASRGVLEIAVRQLRAFARCMTASKSEADELVEDTLMLFLAEDRVLRECDTCFA
ELLEVFRRVHGRTVLIQASRGAPDKEYAGFMQIALPEREVAALVIGGGMMPAQAAELLKLSPTQTEALLETARRKLGPTS
LPEWPFLPASASEYLLNEGGNIG
>Mature_183_residues
MDKRAKFQKPEMPDEFVDLEYDLHRVEASRGVLEIAVRQLRAFARCMTASKSEADELVEDTLMLFLAEDRVLRECDTCFA
ELLEVFRRVHGRTVLIQASRGAPDKEYAGFMQIALPEREVAALVIGGGMMPAQAAELLKLSPTQTEALLETARRKLGPTS
LPEWPFLPASASEYLLNEGGNIG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20398; Mature: 20398

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKRAKFQKPEMPDEFVDLEYDLHRVEASRGVLEIAVRQLRAFARCMTASKSEADELVED
CCCCCCCCCCCCCHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
TLMLFLAEDRVLRECDTCFAELLEVFRRVHGRTVLIQASRGAPDKEYAGFMQIALPEREV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHEECCCHHH
AALVIGGGMMPAQAAELLKLSPTQTEALLETARRKLGPTSLPEWPFLPASASEYLLNEGG
EEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCC
NIG
CCC
>Mature Secondary Structure
MDKRAKFQKPEMPDEFVDLEYDLHRVEASRGVLEIAVRQLRAFARCMTASKSEADELVED
CCCCCCCCCCCCCHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
TLMLFLAEDRVLRECDTCFAELLEVFRRVHGRTVLIQASRGAPDKEYAGFMQIALPEREV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHEECCCHHH
AALVIGGGMMPAQAAELLKLSPTQTEALLETARRKLGPTSLPEWPFLPASASEYLLNEGG
EEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCC
NIG
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA