Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
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Accession | NC_008358 |
Length | 3,705,021 |
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The map label for this gene is yjeB [C]
Identifier: 114798072
GI number: 114798072
Start: 222656
End: 223147
Strand: Direct
Name: yjeB [C]
Synonym: HNE_0231
Alternate gene names: 114798072
Gene position: 222656-223147 (Clockwise)
Preceding gene: 114797706
Following gene: 114797106
Centisome position: 6.01
GC content: 63.62
Gene sequence:
>492_bases ATGAGGATGGGAGAAGGGGTAGAGTGGGCGGCCCATGCCTGCTTGCTGTTGTCGGCTCTGCCAGACGGAGCAGGCCTGCC AGCTGCGGCAATAGCGGCCTTTCATGACGTGCCGCCCGCTTATCTTGCCAAGCATATGCAGGCGCTGGCGCGGGCGGGGA TTGTCACCTCAGCGCGCGGCGCTTCGGGCGGCTATCGCCTGGCTCGCGCGCCGGAAGAGATCAACCTGCTTCAGATTGCC GACGCGGTAGATGGTGGCGAGCCGGCCTTCCGCTGCACCGAAATTCGCCAGCGCGGCCCCTGCGCGGCAAAGGCGGAAGA GTGTATGAAGGCGTGCGGCATCGCGGCGGCGTTTTGGGCTGCCGAACGCATTTACAGGCAACATCTGGAGGGCGTGCGCC TTGCAGATATTCGCTCGGCACTGGTCCGAAAGCAGGATTCGGCCAACATGGAGCGTCTAAAAGCCTGGCTCGAAGCCCAT GCCAACAATTGA
Upstream 100 bases:
>100_bases GCATGCGGGACCATGAAGGGTTTCCTTTATTCGGACATTATATATCCGATATATACCGGATGAGAAATATCCGCAATGAT AATCGCAGGAGGATTCACCG
Downstream 100 bases:
>100_bases GACCGCAGTGCCTGCGCGAAACCCCGCTTGACGCGCCAGCCCGGATTGTTCATTACGCCTCTTCTTCAGGCTTGGCCCGT ACGGGGTCTTGGCCAAAAGG
Product: rrf2 family protein
Products: NA
Alternate protein names: Transcriptional Regulator BadM/Rrf2 Family; Transcriptional Regulator; Rrf2 Family Protein; Rrf2 Family Protein Transcriptional Regulator; Transcriptional Regulator Protein; Rrf2 Family Transcriptional Regulator Protein; RF2 Family Protein; Rrf2 Transcriptional Regulator; Transcriptional Regulator Rrf2 Family
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MRMGEGVEWAAHACLLLSALPDGAGLPAAAIAAFHDVPPAYLAKHMQALARAGIVTSARGASGGYRLARAPEEINLLQIA DAVDGGEPAFRCTEIRQRGPCAAKAEECMKACGIAAAFWAAERIYRQHLEGVRLADIRSALVRKQDSANMERLKAWLEAH ANN
Sequences:
>Translated_163_residues MRMGEGVEWAAHACLLLSALPDGAGLPAAAIAAFHDVPPAYLAKHMQALARAGIVTSARGASGGYRLARAPEEINLLQIA DAVDGGEPAFRCTEIRQRGPCAAKAEECMKACGIAAAFWAAERIYRQHLEGVRLADIRSALVRKQDSANMERLKAWLEAH ANN >Mature_163_residues MRMGEGVEWAAHACLLLSALPDGAGLPAAAIAAFHDVPPAYLAKHMQALARAGIVTSARGASGGYRLARAPEEINLLQIA DAVDGGEPAFRCTEIRQRGPCAAKAEECMKACGIAAAFWAAERIYRQHLEGVRLADIRSALVRKQDSANMERLKAWLEAH ANN
Specific function: Unknown
COG id: COG1959
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17416; Mature: 17416
Theoretical pI: Translated: 7.90; Mature: 7.90
Prosite motif: PS01332 UPF0074
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMGEGVEWAAHACLLLSALPDGAGLPAAAIAAFHDVPPAYLAKHMQALARAGIVTSARG CCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCHHCCCC ASGGYRLARAPEEINLLQIADAVDGGEPAFRCTEIRQRGPCAAKAEECMKACGIAAAFWA CCCCCHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH AERIYRQHLEGVRLADIRSALVRKQDSANMERLKAWLEAHANN HHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MRMGEGVEWAAHACLLLSALPDGAGLPAAAIAAFHDVPPAYLAKHMQALARAGIVTSARG CCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCHHCCCC ASGGYRLARAPEEINLLQIADAVDGGEPAFRCTEIRQRGPCAAKAEECMKACGIAAAFWA CCCCCHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH AERIYRQHLEGVRLADIRSALVRKQDSANMERLKAWLEAHANN HHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA