Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is yjeB [C]

Identifier: 114798072

GI number: 114798072

Start: 222656

End: 223147

Strand: Direct

Name: yjeB [C]

Synonym: HNE_0231

Alternate gene names: 114798072

Gene position: 222656-223147 (Clockwise)

Preceding gene: 114797706

Following gene: 114797106

Centisome position: 6.01

GC content: 63.62

Gene sequence:

>492_bases
ATGAGGATGGGAGAAGGGGTAGAGTGGGCGGCCCATGCCTGCTTGCTGTTGTCGGCTCTGCCAGACGGAGCAGGCCTGCC
AGCTGCGGCAATAGCGGCCTTTCATGACGTGCCGCCCGCTTATCTTGCCAAGCATATGCAGGCGCTGGCGCGGGCGGGGA
TTGTCACCTCAGCGCGCGGCGCTTCGGGCGGCTATCGCCTGGCTCGCGCGCCGGAAGAGATCAACCTGCTTCAGATTGCC
GACGCGGTAGATGGTGGCGAGCCGGCCTTCCGCTGCACCGAAATTCGCCAGCGCGGCCCCTGCGCGGCAAAGGCGGAAGA
GTGTATGAAGGCGTGCGGCATCGCGGCGGCGTTTTGGGCTGCCGAACGCATTTACAGGCAACATCTGGAGGGCGTGCGCC
TTGCAGATATTCGCTCGGCACTGGTCCGAAAGCAGGATTCGGCCAACATGGAGCGTCTAAAAGCCTGGCTCGAAGCCCAT
GCCAACAATTGA

Upstream 100 bases:

>100_bases
GCATGCGGGACCATGAAGGGTTTCCTTTATTCGGACATTATATATCCGATATATACCGGATGAGAAATATCCGCAATGAT
AATCGCAGGAGGATTCACCG

Downstream 100 bases:

>100_bases
GACCGCAGTGCCTGCGCGAAACCCCGCTTGACGCGCCAGCCCGGATTGTTCATTACGCCTCTTCTTCAGGCTTGGCCCGT
ACGGGGTCTTGGCCAAAAGG

Product: rrf2 family protein

Products: NA

Alternate protein names: Transcriptional Regulator BadM/Rrf2 Family; Transcriptional Regulator; Rrf2 Family Protein; Rrf2 Family Protein Transcriptional Regulator; Transcriptional Regulator Protein; Rrf2 Family Transcriptional Regulator Protein; RF2 Family Protein; Rrf2 Transcriptional Regulator; Transcriptional Regulator Rrf2 Family

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MRMGEGVEWAAHACLLLSALPDGAGLPAAAIAAFHDVPPAYLAKHMQALARAGIVTSARGASGGYRLARAPEEINLLQIA
DAVDGGEPAFRCTEIRQRGPCAAKAEECMKACGIAAAFWAAERIYRQHLEGVRLADIRSALVRKQDSANMERLKAWLEAH
ANN

Sequences:

>Translated_163_residues
MRMGEGVEWAAHACLLLSALPDGAGLPAAAIAAFHDVPPAYLAKHMQALARAGIVTSARGASGGYRLARAPEEINLLQIA
DAVDGGEPAFRCTEIRQRGPCAAKAEECMKACGIAAAFWAAERIYRQHLEGVRLADIRSALVRKQDSANMERLKAWLEAH
ANN
>Mature_163_residues
MRMGEGVEWAAHACLLLSALPDGAGLPAAAIAAFHDVPPAYLAKHMQALARAGIVTSARGASGGYRLARAPEEINLLQIA
DAVDGGEPAFRCTEIRQRGPCAAKAEECMKACGIAAAFWAAERIYRQHLEGVRLADIRSALVRKQDSANMERLKAWLEAH
ANN

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17416; Mature: 17416

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: PS01332 UPF0074

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMGEGVEWAAHACLLLSALPDGAGLPAAAIAAFHDVPPAYLAKHMQALARAGIVTSARG
CCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCHHCCCC
ASGGYRLARAPEEINLLQIADAVDGGEPAFRCTEIRQRGPCAAKAEECMKACGIAAAFWA
CCCCCHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
AERIYRQHLEGVRLADIRSALVRKQDSANMERLKAWLEAHANN
HHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MRMGEGVEWAAHACLLLSALPDGAGLPAAAIAAFHDVPPAYLAKHMQALARAGIVTSARG
CCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCHHCCCC
ASGGYRLARAPEEINLLQIADAVDGGEPAFRCTEIRQRGPCAAKAEECMKACGIAAAFWA
CCCCCHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
AERIYRQHLEGVRLADIRSALVRKQDSANMERLKAWLEAHANN
HHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA