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The map label for this gene is ymdB [H]

Identifier: 114798061

GI number: 114798061

Start: 3492323

End: 3493147

Strand: Reverse

Name: ymdB [H]

Synonym: HNE_3343

Alternate gene names: 114798061

Gene position: 3493147-3492323 (Counterclockwise)

Preceding gene: 114800286

Following gene: 114799045

Centisome position: 94.28

GC content: 64.97

Gene sequence:

>825_bases
ATGAGACTGGCCTTTTTCGGAGACGTTGTCGGCAAGCCTGGACGGGCCGCCGTGCTGGAGCACCTTCCGGAGCTGCGCGT
GCGCCTCCGTCTGGACTTCGTTGTCGTCAATGGCGAGAACGCCGCCGGAGGCTTCGGCCTCACCCGTCAGATTGCGGAGG
AATTTTTCGGCGCGGGCGCTGATTGTCTCACCCTGGGCGATCATGCCTGGGATCAGCGCGAGGCGCTGACCTATATCGAG
CGGGAACCCCGCCTGCTGCGGCCGTTGAATTATCCGGTCAGCGCGGGCGCGCCGGGGAAGGGGGCGGAGCTTTACATGCT
GCCCGATGGCCGCCGGGTTGGCGTTGTCCAGTTGCAGGGCAATGTCTTCATGCGCCAGGCGCTTGCCTGTCCCTTTGCTG
CGGCCGATGCCGCGCTCGACCAGATGCCGCTGGGCACAGTGGCCGACGCCGTCATCGTCGACATGCATTGCGAGGCCACC
AGCGAGAAGATGGCCATGGGCCACCATTGCGACGGCCGCGCGAGCCTGGTGGTCGGCAGCCATACGCATGTACCCACCGC
CGACACGATGATCCTGAATGGCGGCACAGCCTATCAGACCGATGCGGGCATGTGCGGAGATTATGACTCGGTGATCGGTA
TGCAGAAGGAAATGTCTCTCTACCGGTTTACCACGCAATTGCCGGGCGAGCGGTATCAGCCGGCGCTGGGCGAAGGCACG
CTGTGCGGTACATTTGTCGAGACCGACGACCGCACGGGCCTTGCGCTGCGGGTGGAGCCGATCCGCATGGGTGGGCGGCT
CAGCGCTCAGGTGCCGGCAATCTGA

Upstream 100 bases:

>100_bases
GCGCACCGCCGGTTTTTCCGGTGCCTGATTTCGGGGCGCGGCGGCAAAAGGCTGCCGCGCCCTTTTCAATAGACGGTATT
GGAGTCATAGGCTTGAGCGC

Downstream 100 bases:

>100_bases
CCGACAGAAAACATGACCGGTTGGTAATGCGGCCCGCCTCTGCGCCGCGGGATGCGGCGCAACGGGCACAGGATGCGCCG
CCTTTCGGGAAGTTCATGAC

Product: Ser/Thr protein phosphatase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MRLAFFGDVVGKPGRAAVLEHLPELRVRLRLDFVVVNGENAAGGFGLTRQIAEEFFGAGADCLTLGDHAWDQREALTYIE
REPRLLRPLNYPVSAGAPGKGAELYMLPDGRRVGVVQLQGNVFMRQALACPFAAADAALDQMPLGTVADAVIVDMHCEAT
SEKMAMGHHCDGRASLVVGSHTHVPTADTMILNGGTAYQTDAGMCGDYDSVIGMQKEMSLYRFTTQLPGERYQPALGEGT
LCGTFVETDDRTGLALRVEPIRMGGRLSAQVPAI

Sequences:

>Translated_274_residues
MRLAFFGDVVGKPGRAAVLEHLPELRVRLRLDFVVVNGENAAGGFGLTRQIAEEFFGAGADCLTLGDHAWDQREALTYIE
REPRLLRPLNYPVSAGAPGKGAELYMLPDGRRVGVVQLQGNVFMRQALACPFAAADAALDQMPLGTVADAVIVDMHCEAT
SEKMAMGHHCDGRASLVVGSHTHVPTADTMILNGGTAYQTDAGMCGDYDSVIGMQKEMSLYRFTTQLPGERYQPALGEGT
LCGTFVETDDRTGLALRVEPIRMGGRLSAQVPAI
>Mature_274_residues
MRLAFFGDVVGKPGRAAVLEHLPELRVRLRLDFVVVNGENAAGGFGLTRQIAEEFFGAGADCLTLGDHAWDQREALTYIE
REPRLLRPLNYPVSAGAPGKGAELYMLPDGRRVGVVQLQGNVFMRQALACPFAAADAALDQMPLGTVADAVIVDMHCEAT
SEKMAMGHHCDGRASLVVGSHTHVPTADTMILNGGTAYQTDAGMCGDYDSVIGMQKEMSLYRFTTQLPGERYQPALGEGT
LCGTFVETDDRTGLALRVEPIRMGGRLSAQVPAI

Specific function: Unknown

COG id: COG1692

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005235 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29439; Mature: 29439

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLAFFGDVVGKPGRAAVLEHLPELRVRLRLDFVVVNGENAAGGFGLTRQIAEEFFGAGA
CEEEEECHHHCCCCHHHHHHHCHHEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCC
DCLTLGDHAWDQREALTYIEREPRLLRPLNYPVSAGAPGKGAELYMLPDGRRVGVVQLQG
CEEEECCCCCCHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCEEEECCCCCEEEEEEECC
NVFMRQALACPFAAADAALDQMPLGTVADAVIVDMHCEATSEKMAMGHHCDGRASLVVGS
CHHHHHHHCCCCHHHHHHHHCCCCCHHCCEEEEEEECCCCCHHHHCCCCCCCCEEEEEEC
HTHVPTADTMILNGGTAYQTDAGMCGDYDSVIGMQKEMSLYRFTTQLPGERYQPALGEGT
CCCCCCCCEEEEECCCEEECCCCCCCCHHHHHCHHHHHHHEEHHHHCCCCCCCCCCCCCC
LCGTFVETDDRTGLALRVEPIRMGGRLSAQVPAI
EEEEEEECCCCCCEEEEEEEEECCCEECCCCCCC
>Mature Secondary Structure
MRLAFFGDVVGKPGRAAVLEHLPELRVRLRLDFVVVNGENAAGGFGLTRQIAEEFFGAGA
CEEEEECHHHCCCCHHHHHHHCHHEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCC
DCLTLGDHAWDQREALTYIEREPRLLRPLNYPVSAGAPGKGAELYMLPDGRRVGVVQLQG
CEEEECCCCCCHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCEEEECCCCCEEEEEEECC
NVFMRQALACPFAAADAALDQMPLGTVADAVIVDMHCEATSEKMAMGHHCDGRASLVVGS
CHHHHHHHCCCCHHHHHHHHCCCCCHHCCEEEEEEECCCCCHHHHCCCCCCCCEEEEEEC
HTHVPTADTMILNGGTAYQTDAGMCGDYDSVIGMQKEMSLYRFTTQLPGERYQPALGEGT
CCCCCCCCEEEEECCCEEECCCCCCCCHHHHHCHHHHHHHEEHHHHCCCCCCCCCCCCCC
LCGTFVETDDRTGLALRVEPIRMGGRLSAQVPAI
EEEEEEECCCCCCEEEEEEEEECCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]