Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
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Accession | NC_008358 |
Length | 3,705,021 |
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The map label for this gene is 114798026
Identifier: 114798026
GI number: 114798026
Start: 665431
End: 667605
Strand: Direct
Name: 114798026
Synonym: HNE_0665
Alternate gene names: NA
Gene position: 665431-667605 (Clockwise)
Preceding gene: 114797133
Following gene: 114799069
Centisome position: 17.96
GC content: 61.43
Gene sequence:
>2175_bases ATGATACGCTTTTTCGGTCTGCCACTGATCGCGCTGGTCGCCTGCGCCTGCACATATTCTCAACCCACCGCGCTTGTGCC TGATGTGCCAGAGCCGCCGGCACCGCTGGAAAACCGCTTTGACGGTTATGCGGTGCCCGAGCAGGATGAAAGCCTTGCTG TCTTTGAAGATCCCGCATTGGAGGGCCTGCGTTCTCCGGCGCTCTCCCGGTTTCGTACCGAAGCGGAATTTGCCGATTGG CTGAAGGCCACGCGCGCTGCATCGGAAGCACGCGGGATCGGGCAGATGTATCCGGTGCCTCTGCCGGCTGCCCCGCCTTC TTCTGATATGGCGATGTCGGTCGGTGAGCCTCAGGCAATGGAGGCGGCGCCTTCCGAGGTGATGGTCACCGGCAGTGCAG AGCCAGAGTCAGATTCCAATCCCGAGATCACCAACAATCAGAAGGCTGGTGTCGATGAAGGCGGCATCATCAAGCAGATC GGCCAGCACCTCGTTATCCTTCAGGATGGGCGTCTGTTCGTCACCGATCTTATGCCGGGCGGGCAGGCGGGCCTGAAGCT GGCCGACCGCGCCAATGTCTATCGCTCCAGCGATGAGGACACCTGGTATGATGAAGTGCTCGTATCGGGCCGCACCATTC TCGTGACGGGGTATTCCTATCGCGAGGAGGCCACCGAATATACCGTGCTGAACCTTGGTGAAGACGGGAAGGTGACGCGG CAGGCGACCTTCTACATTTCCTCCAACGATTATTATTCCGGTTCCAACTATGCCACGCGCATGATCGACGGGAAGCTGGT CATCCATACACCGATCTATCTGGTCGGGCGCGGATGGTGGGATGATCTGGAAATCCCCGTCATCCGCGAATGGCGGCAGG AAGAGGAAGACGGCTTCCGCGAACGGACCGAGCTTGAAGATGGCCGGCCGCTGTTCAGTGCGACCGACATATGGATGCCG GTTCAGCAGACGCTGATGCCGGTGATCCATACCGTGACCGTGTGCGATATTTCAGGCGTTACCGACACCTCCATTCCCGC CTGCAAGGCGACCGCAATTGTCGGCACCGAAACCCATGAGTTCCTCGTCACCAAGGACGCTTTCTGGCTCTGGATGAGCC CGTCCGGTCAGGAGCGTGCGCGGGAGCTGCGCGAGGATCATCCCCATCCGGAGTGTTCTTCGGGCCCGCGTCCGGAACTT TCCAACATTGTGCCTTCCGCGCTTGTGCGCCTGCCGGTCGATGGATCGAAGCCCGGCGTTCTGGGGGTGCGGGGCGAGCC GCAGAACCAGTTCTCGATGGACATGGATGCCGGAACGTTCCGCGCCGTGCTTGACTGGCGCCACCGCGATTGCGGAATTT GGGTGACCAGGGAAGAAACCGACCTCACCTTCTTTGATGTGCCGCTAGATGAGTTGGGGGACGTTCTCCTCGATACCGCC GGCGGGCGCTACTTCGATCTGCCCACACCTGGCGCGTCTGCGTATGAAGCGCGCTTCACGGAGAAGCACCTGGTTTACGG CGCGCGCGAAGGCTGGGGCAGCTGGCCGCCAAGCGACGGCGAAACCCGTGAGAATGGCCGCGCGATCATCGTGCCGGTAG ATGCGCCTGCTTCGCCCGTCACGGTCGAGCTTTCCCATGATGTCATTCGCGCTGAACGCGCAGGCCCCTACATGGCCCTG ACGGGGTATCATGATGATGCCGGGCTCAGCATGTCGCTGATCGACCTTCGCGCCGACCCCCGCCTCTCCGGGACGATGAC ACTTCAGGGGCGCTATGAGAGCGAGACCCGCAGCCATGCCTTCAACAGCCGCATCGGCGCGGACGGCGCTGGGCTGATCG GGCTGCCCACTGTTCCGAGGTCAGAGGAAGCTGAGCGTTGGTGGTGGTGGTCGAGCAGCTCTGACATGAGCTATATCGCT GCTGCAGCCGATGGCAGCCTGTCAGAGGCTGGTATGATCGATGCAACGCGCCGCGATCCAGACCTTCCCTCCGAGACCGG GTATGCCTGCGAAGTGTCGTGTATTGACTGGTACGGCAATGCCCGGCCGATCTTCACCGGGAACCGCCTGTTGGCACTGA TCAACTCTGAACTGGTCGAAGGCGCGTTGCAGGACGGCACAGTTACCGAGATCAACCGGATCGATCTCACCGCGCCGCTG TCTGAAGAGAGATAG
Upstream 100 bases:
>100_bases AGGGAACACCGGACGCAGCGCCAGCCTCGCCACGTCTCTGCCACTACTCTGCCGCAGTCGCATGGGGTAATGTCGTCATA CGTTTGAGGGGACGCTCATC
Downstream 100 bases:
>100_bases AGGCTGCCTCAGCCCCGGCGGTTTGACGCGCCGGTGTTGAGGCGGTCGATCAGCTCCGGCGTGACGGTCCCGGAAACCGA GAGTCCTTCATTGCGCTGAT
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 724; Mature: 724
Protein sequence:
>724_residues MIRFFGLPLIALVACACTYSQPTALVPDVPEPPAPLENRFDGYAVPEQDESLAVFEDPALEGLRSPALSRFRTEAEFADW LKATRAASEARGIGQMYPVPLPAAPPSSDMAMSVGEPQAMEAAPSEVMVTGSAEPESDSNPEITNNQKAGVDEGGIIKQI GQHLVILQDGRLFVTDLMPGGQAGLKLADRANVYRSSDEDTWYDEVLVSGRTILVTGYSYREEATEYTVLNLGEDGKVTR QATFYISSNDYYSGSNYATRMIDGKLVIHTPIYLVGRGWWDDLEIPVIREWRQEEEDGFRERTELEDGRPLFSATDIWMP VQQTLMPVIHTVTVCDISGVTDTSIPACKATAIVGTETHEFLVTKDAFWLWMSPSGQERARELREDHPHPECSSGPRPEL SNIVPSALVRLPVDGSKPGVLGVRGEPQNQFSMDMDAGTFRAVLDWRHRDCGIWVTREETDLTFFDVPLDELGDVLLDTA GGRYFDLPTPGASAYEARFTEKHLVYGAREGWGSWPPSDGETRENGRAIIVPVDAPASPVTVELSHDVIRAERAGPYMAL TGYHDDAGLSMSLIDLRADPRLSGTMTLQGRYESETRSHAFNSRIGADGAGLIGLPTVPRSEEAERWWWWSSSSDMSYIA AAADGSLSEAGMIDATRRDPDLPSETGYACEVSCIDWYGNARPIFTGNRLLALINSELVEGALQDGTVTEINRIDLTAPL SEER
Sequences:
>Translated_724_residues MIRFFGLPLIALVACACTYSQPTALVPDVPEPPAPLENRFDGYAVPEQDESLAVFEDPALEGLRSPALSRFRTEAEFADW LKATRAASEARGIGQMYPVPLPAAPPSSDMAMSVGEPQAMEAAPSEVMVTGSAEPESDSNPEITNNQKAGVDEGGIIKQI GQHLVILQDGRLFVTDLMPGGQAGLKLADRANVYRSSDEDTWYDEVLVSGRTILVTGYSYREEATEYTVLNLGEDGKVTR QATFYISSNDYYSGSNYATRMIDGKLVIHTPIYLVGRGWWDDLEIPVIREWRQEEEDGFRERTELEDGRPLFSATDIWMP VQQTLMPVIHTVTVCDISGVTDTSIPACKATAIVGTETHEFLVTKDAFWLWMSPSGQERARELREDHPHPECSSGPRPEL SNIVPSALVRLPVDGSKPGVLGVRGEPQNQFSMDMDAGTFRAVLDWRHRDCGIWVTREETDLTFFDVPLDELGDVLLDTA GGRYFDLPTPGASAYEARFTEKHLVYGAREGWGSWPPSDGETRENGRAIIVPVDAPASPVTVELSHDVIRAERAGPYMAL TGYHDDAGLSMSLIDLRADPRLSGTMTLQGRYESETRSHAFNSRIGADGAGLIGLPTVPRSEEAERWWWWSSSSDMSYIA AAADGSLSEAGMIDATRRDPDLPSETGYACEVSCIDWYGNARPIFTGNRLLALINSELVEGALQDGTVTEINRIDLTAPL SEER >Mature_724_residues MIRFFGLPLIALVACACTYSQPTALVPDVPEPPAPLENRFDGYAVPEQDESLAVFEDPALEGLRSPALSRFRTEAEFADW LKATRAASEARGIGQMYPVPLPAAPPSSDMAMSVGEPQAMEAAPSEVMVTGSAEPESDSNPEITNNQKAGVDEGGIIKQI GQHLVILQDGRLFVTDLMPGGQAGLKLADRANVYRSSDEDTWYDEVLVSGRTILVTGYSYREEATEYTVLNLGEDGKVTR QATFYISSNDYYSGSNYATRMIDGKLVIHTPIYLVGRGWWDDLEIPVIREWRQEEEDGFRERTELEDGRPLFSATDIWMP VQQTLMPVIHTVTVCDISGVTDTSIPACKATAIVGTETHEFLVTKDAFWLWMSPSGQERARELREDHPHPECSSGPRPEL SNIVPSALVRLPVDGSKPGVLGVRGEPQNQFSMDMDAGTFRAVLDWRHRDCGIWVTREETDLTFFDVPLDELGDVLLDTA GGRYFDLPTPGASAYEARFTEKHLVYGAREGWGSWPPSDGETRENGRAIIVPVDAPASPVTVELSHDVIRAERAGPYMAL TGYHDDAGLSMSLIDLRADPRLSGTMTLQGRYESETRSHAFNSRIGADGAGLIGLPTVPRSEEAERWWWWSSSSDMSYIA AAADGSLSEAGMIDATRRDPDLPSETGYACEVSCIDWYGNARPIFTGNRLLALINSELVEGALQDGTVTEINRIDLTAPL SEER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 79542; Mature: 79542
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRFFGLPLIALVACACTYSQPTALVPDVPEPPAPLENRFDGYAVPEQDESLAVFEDPAL CEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEECCHHH EGLRSPALSRFRTEAEFADWLKATRAASEARGIGQMYPVPLPAAPPSSDMAMSVGEPQAM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCHHH EAAPSEVMVTGSAEPESDSNPEITNNQKAGVDEGGIIKQIGQHLVILQDGRLFVTDLMPG HCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCEEEEEECCCEEEEECCCC GQAGLKLADRANVYRSSDEDTWYDEVLVSGRTILVTGYSYREEATEYTVLNLGEDGKVTR CHHCCEEHHHHHHHCCCCCCCHHHHHHHCCCEEEEECCCHHCCCCEEEEEEECCCCCEEE QATFYISSNDYYSGSNYATRMIDGKLVIHTPIYLVGRGWWDDLEIPVIREWRQEEEDGFR EEEEEEECCCEECCCCEEEEEECCEEEEECCEEEEECCCCCCCCCHHHHHHHHHHHHHHH ERTELEDGRPLFSATDIWMPVQQTLMPVIHTVTVCDISGVTDTSIPACKATAIVGTETHE HHHCCCCCCCEEEECCCHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCEEEEEECCCCCE FLVTKDAFWLWMSPSGQERARELREDHPHPECSSGPRPELSNIVPSALVRLPVDGSKPGV EEEEECEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHCCHHHEEECCCCCCCCE LGVRGEPQNQFSMDMDAGTFRAVLDWRHRDCGIWVTREETDLTFFDVPLDELGDVLLDTA EEECCCCCCCEEECCCCCCEEEHHHCCCCCCCEEEEECCCCEEEEECCHHHHHHHHEECC GGRYFDLPTPGASAYEARFTEKHLVYGAREGWGSWPPSDGETRENGRAIIVPVDAPASPV CCEEEECCCCCCCHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCE TVELSHDVIRAERAGPYMALTGYHDDAGLSMSLIDLRADPRLSGTMTLQGRYESETRSHA EEEECCHHHHHHCCCCEEEEEECCCCCCCEEEEEEECCCCCCCEEEEEECCCCCHHHHHH FNSRIGADGAGLIGLPTVPRSEEAERWWWWSSSSDMSYIAAAADGSLSEAGMIDATRRDP HHCCCCCCCCCEEECCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCEECCCCCC DLPSETGYACEVSCIDWYGNARPIFTGNRLLALINSELVEGALQDGTVTEINRIDLTAPL CCCCCCCCEEEEEEEECCCCCCEEEECCEEEEEHHHHHHHHHCCCCCEEEEEEEEEECCC SEER CCCC >Mature Secondary Structure MIRFFGLPLIALVACACTYSQPTALVPDVPEPPAPLENRFDGYAVPEQDESLAVFEDPAL CEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEECCHHH EGLRSPALSRFRTEAEFADWLKATRAASEARGIGQMYPVPLPAAPPSSDMAMSVGEPQAM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCHHH EAAPSEVMVTGSAEPESDSNPEITNNQKAGVDEGGIIKQIGQHLVILQDGRLFVTDLMPG HCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCEEEEEECCCEEEEECCCC GQAGLKLADRANVYRSSDEDTWYDEVLVSGRTILVTGYSYREEATEYTVLNLGEDGKVTR CHHCCEEHHHHHHHCCCCCCCHHHHHHHCCCEEEEECCCHHCCCCEEEEEEECCCCCEEE QATFYISSNDYYSGSNYATRMIDGKLVIHTPIYLVGRGWWDDLEIPVIREWRQEEEDGFR EEEEEEECCCEECCCCEEEEEECCEEEEECCEEEEECCCCCCCCCHHHHHHHHHHHHHHH ERTELEDGRPLFSATDIWMPVQQTLMPVIHTVTVCDISGVTDTSIPACKATAIVGTETHE HHHCCCCCCCEEEECCCHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCEEEEEECCCCCE FLVTKDAFWLWMSPSGQERARELREDHPHPECSSGPRPELSNIVPSALVRLPVDGSKPGV EEEEECEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHCCHHHEEECCCCCCCCE LGVRGEPQNQFSMDMDAGTFRAVLDWRHRDCGIWVTREETDLTFFDVPLDELGDVLLDTA EEECCCCCCCEEECCCCCCEEEHHHCCCCCCCEEEEECCCCEEEEECCHHHHHHHHEECC GGRYFDLPTPGASAYEARFTEKHLVYGAREGWGSWPPSDGETRENGRAIIVPVDAPASPV CCEEEECCCCCCCHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCE TVELSHDVIRAERAGPYMALTGYHDDAGLSMSLIDLRADPRLSGTMTLQGRYESETRSHA EEEECCHHHHHHCCCCEEEEEECCCCCCCEEEEEEECCCCCCCEEEEEECCCCCHHHHHH FNSRIGADGAGLIGLPTVPRSEEAERWWWWSSSSDMSYIAAAADGSLSEAGMIDATRRDP HHCCCCCCCCCEEECCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCEECCCCCC DLPSETGYACEVSCIDWYGNARPIFTGNRLLALINSELVEGALQDGTVTEINRIDLTAPL CCCCCCCCEEEEEEEECCCCCCEEEECCEEEEEHHHHHHHHHCCCCCEEEEEEEEEECCC SEER CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA