| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114798003
Identifier: 114798003
GI number: 114798003
Start: 175881
End: 176516
Strand: Direct
Name: 114798003
Synonym: HNE_0189
Alternate gene names: NA
Gene position: 175881-176516 (Clockwise)
Preceding gene: 114797268
Following gene: 114798197
Centisome position: 4.75
GC content: 57.86
Gene sequence:
>636_bases ATGCAGCATAATCTCGACCTGGATGCCGTGCAGGTCATTGCCTGGGATTTCGACGGTGTTCTCAATCGTAATATTGAGAA GGGCGTCTTCGCCTGGTCGCGCAATTTCGAACAGGATCTTGGGCTGCCGCTTCAATCCTTTTCCAGCTTTCTGTTTTCCG GTCGCTTTCAGAAGGCGATGGTGGGGCAGGCTTGCCTGGTCGAGTTGGTGACCGAATGGGCTGAATTGAATGATGCCCCC GGCCGCGCGCCCGAGATACTCGACTATTGGTTCAGACAGGACGCAATCCCCGACGACCGCACACTGGCGCTTTTCGAGCC CCTGAAGGCTCGCGGACTGCGACACGTGATGGCGACCAATAACGAAATTCACCGCACGGCTTTTATCGAAGACGCCATGG GGTTTGGCGGGCGGATGGAGCGCATTTTTGCGGCAGGGCGAATGGGCATCGCAAAACCCGATACCGCCTATTTCGCCCAC ATTGAAACAGAGCTTGGCGTGGCGCCTGAGGCGCTGCTGCTCGTCGATGACATGGAAGAGAATGTTGCGTCCGCCAGAAC CCGCGGATGGCAGGCGTTCCATTTCGAGGAAGGCGCTCATGAGCTTCTGGAGCGGGCGCTCGGGCTTCAGCTGTAA
Upstream 100 bases:
>100_bases TCTGGATTGAAGGCACCATCCATACCCAGACCCAAGAAAGCGATCTTGCGGACGCTGCCTATACGATCACGCTGACCGGG ATCGAGGAATACACTTACTG
Downstream 100 bases:
>100_bases TTGATGCCCATTTCGGGCGAGCCCCGCTTAAAGCAAGAAGGGCGACCCGACAGGCCGCCCTTCCGCACTCTACGCGGTAC TCTACTATCCACAAAGTAGC
Product: HAD family hydrolase
Products: NA
Alternate protein names: Hydrolase; HAD-Superfamily Hydrolase
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MQHNLDLDAVQVIAWDFDGVLNRNIEKGVFAWSRNFEQDLGLPLQSFSSFLFSGRFQKAMVGQACLVELVTEWAELNDAP GRAPEILDYWFRQDAIPDDRTLALFEPLKARGLRHVMATNNEIHRTAFIEDAMGFGGRMERIFAAGRMGIAKPDTAYFAH IETELGVAPEALLLVDDMEENVASARTRGWQAFHFEEGAHELLERALGLQL
Sequences:
>Translated_211_residues MQHNLDLDAVQVIAWDFDGVLNRNIEKGVFAWSRNFEQDLGLPLQSFSSFLFSGRFQKAMVGQACLVELVTEWAELNDAP GRAPEILDYWFRQDAIPDDRTLALFEPLKARGLRHVMATNNEIHRTAFIEDAMGFGGRMERIFAAGRMGIAKPDTAYFAH IETELGVAPEALLLVDDMEENVASARTRGWQAFHFEEGAHELLERALGLQL >Mature_211_residues MQHNLDLDAVQVIAWDFDGVLNRNIEKGVFAWSRNFEQDLGLPLQSFSSFLFSGRFQKAMVGQACLVELVTEWAELNDAP GRAPEILDYWFRQDAIPDDRTLALFEPLKARGLRHVMATNNEIHRTAFIEDAMGFGGRMERIFAAGRMGIAKPDTAYFAH IETELGVAPEALLLVDDMEENVASARTRGWQAFHFEEGAHELLERALGLQL
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23809; Mature: 23809
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQHNLDLDAVQVIAWDFDGVLNRNIEKGVFAWSRNFEQDLGLPLQSFSSFLFSGRFQKAM CCCCCCHHHHHHEEECHHHHHCCCHHHHHHHHHCCCHHHHCCCHHHHHHHHHCCCHHHHH VGQACLVELVTEWAELNDAPGRAPEILDYWFRQDAIPDDRTLALFEPLKARGLRHVMATN HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHCC NEIHRTAFIEDAMGFGGRMERIFAAGRMGIAKPDTAYFAHIETELGVAPEALLLVDDMEE CCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCEEEEEHHHCCCCCCCEEEEHHHHH NVASARTRGWQAFHFEEGAHELLERALGLQL HHHHHHHCCCEEEEHHHHHHHHHHHHHCCCC >Mature Secondary Structure MQHNLDLDAVQVIAWDFDGVLNRNIEKGVFAWSRNFEQDLGLPLQSFSSFLFSGRFQKAM CCCCCCHHHHHHEEECHHHHHCCCHHHHHHHHHCCCHHHHCCCHHHHHHHHHCCCHHHHH VGQACLVELVTEWAELNDAPGRAPEILDYWFRQDAIPDDRTLALFEPLKARGLRHVMATN HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHCC NEIHRTAFIEDAMGFGGRMERIFAAGRMGIAKPDTAYFAHIETELGVAPEALLLVDDMEE CCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCEEEEEHHHCCCCCCCEEEEHHHHH NVASARTRGWQAFHFEEGAHELLERALGLQL HHHHHHHCCCEEEEHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA