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The map label for this gene is sdcS [H]

Identifier: 114797982

GI number: 114797982

Start: 975967

End: 977412

Strand: Reverse

Name: sdcS [H]

Synonym: HNE_0962

Alternate gene names: 114797982

Gene position: 977412-975967 (Counterclockwise)

Preceding gene: 114800457

Following gene: 114797232

Centisome position: 26.38

GC content: 66.18

Gene sequence:

>1446_bases
ATGTCCAATGGAGACCGGCAGACTGCCGTGTCGCGACCCGGTTTGGCTGCCAGACTCGGTCTCGTCATCGGCCCGGCGCT
GGCCATCCTGATCGCAGTCCTTCCGGCACCTGAGGGTCTTGAGCGCGGCGGTATGCTGGTCGCGGCAGTCCTGGTCCTGA
TGGCCGTCTGGTGGGCGACCGAAGCGATCCCCATTGCGGCAACCTCTCTTCTCCCCCTTGGCCTCCTGCCCCTGACGGGC
GTTGCCAGTCTCGGCGCCATCGCCGCGCCGTATGCCGACTCGGTCGTGCTGCTGCTGCTGGGCGGGTTCATCATGGCCAT
CGGCATCGAGAAATGGCACCTCCACCGGCGTATTGCGCTGAATGTGCTGCTGCTCTCCGGGGCGCGCCTGAAGCTGCTCG
CGGGCGGGTTCATGCTCGCCACCGCCCTGCTCTCGATGTGGATCTCCAACACTGCCACCAGCCTGATGATGGCGCCGATT
GCCCTCTCGGTGGCGGTTGCCGCCGGCGGCGGGCCCCGCCTTGCCAGCGCCCTGCTGCTGGGCATTGCCTACTCAGCCTC
CATCGGCGGCCTCGCCACCCCCGTCGGCACGCCCACCAACCTCATCGCCATGGGCTGGCTGCGCGAGAATACCGACATCG
AGATCAGCTTCCGCGAATGGATGAGCTTTGGCCTGCCGGTCGTGCTGATCATGCTGCCGATGGCGTGGCTGATCCTGACC
TGGGGGCTGAAGTCTGACGCCGCAGCCGCCAAGGCCGCCGAAGCCACGATACGCGGCCAGCGCAACGCGCTGGGGCGGAT
GACCATTCCGGAAAGCCGCGTCGCCATCGTGTTCGGCGTCATCGCGCTCGCCTGGATCACGCGCGAACAGCTGGTCCAGA
TCCCGCTCTTTGCCGGGCTCACCGATATGGGCATCGCCATCCTGGGCGCGATCCTCATGTTCCTCGTGCCCCATGGCAGC
CGCGAACCGGAACACCAGCCCGGTGGCTGGGCGCTGCTCAACTGGGACGACGCCAAGGCAGTGCCCTGGGATGTGGTGCT
GCTGTTCGGCGGGGGGCTGTCGCTGGCCGCTGCCGTTCAGGCGTCCGGGCTCGCCGGGTATCTGGGCAATTCCCTGGCCG
AACTCGCCGCCGTGCCGCCGATTGTGCTGATCTTCATGGTGGTCACCATCATCATCTTCCTGACCGAAATCATGTCGAAT
GTGGCGGCAATGACGACATTCCTGCCCATCCTCGGCGCGCTCGCCACGGCGACGGGTGTGGATGTACGCAGCCTGATCAT
TCCCTGCGCCATGGCCGCGTCCTGCGCCTTCATGCTGCCGATTGCGACGGGGCCGAATGCGGTGGTGTTCGGGATGCGGC
AATTCTCCATCGGGCGGATGATGAAGTCCGGCTTCTGGCTGAACGTGGCCTGCGTCATCATCGTGACGCTGTATTTCGGC
CTCTGA

Upstream 100 bases:

>100_bases
GCCCAACGGCCGTGCCGGTTCGATTCCGGCCGCCGGCACCAATTGCCCTCCCGCGAAAAATCGTTAGCGTCCCCGGAGAG
AAAATTGCGGGGTATAAGAT

Downstream 100 bases:

>100_bases
AGGGACGGCGCCGAAGCGGCTAAACATAAATGTCATAAAACTGAGATTGACGTGTAGGTATCCCCCGCCTACGCCGCGCG
CTTCCTGTCAGTATTGTGTC

Product: sodium:sulfate symporter family protein

Products: NA

Alternate protein names: Na(+)/dicarboxylate symporter [H]

Number of amino acids: Translated: 481; Mature: 480

Protein sequence:

>481_residues
MSNGDRQTAVSRPGLAARLGLVIGPALAILIAVLPAPEGLERGGMLVAAVLVLMAVWWATEAIPIAATSLLPLGLLPLTG
VASLGAIAAPYADSVVLLLLGGFIMAIGIEKWHLHRRIALNVLLLSGARLKLLAGGFMLATALLSMWISNTATSLMMAPI
ALSVAVAAGGGPRLASALLLGIAYSASIGGLATPVGTPTNLIAMGWLRENTDIEISFREWMSFGLPVVLIMLPMAWLILT
WGLKSDAAAAKAAEATIRGQRNALGRMTIPESRVAIVFGVIALAWITREQLVQIPLFAGLTDMGIAILGAILMFLVPHGS
REPEHQPGGWALLNWDDAKAVPWDVVLLFGGGLSLAAAVQASGLAGYLGNSLAELAAVPPIVLIFMVVTIIIFLTEIMSN
VAAMTTFLPILGALATATGVDVRSLIIPCAMAASCAFMLPIATGPNAVVFGMRQFSIGRMMKSGFWLNVACVIIVTLYFG
L

Sequences:

>Translated_481_residues
MSNGDRQTAVSRPGLAARLGLVIGPALAILIAVLPAPEGLERGGMLVAAVLVLMAVWWATEAIPIAATSLLPLGLLPLTG
VASLGAIAAPYADSVVLLLLGGFIMAIGIEKWHLHRRIALNVLLLSGARLKLLAGGFMLATALLSMWISNTATSLMMAPI
ALSVAVAAGGGPRLASALLLGIAYSASIGGLATPVGTPTNLIAMGWLRENTDIEISFREWMSFGLPVVLIMLPMAWLILT
WGLKSDAAAAKAAEATIRGQRNALGRMTIPESRVAIVFGVIALAWITREQLVQIPLFAGLTDMGIAILGAILMFLVPHGS
REPEHQPGGWALLNWDDAKAVPWDVVLLFGGGLSLAAAVQASGLAGYLGNSLAELAAVPPIVLIFMVVTIIIFLTEIMSN
VAAMTTFLPILGALATATGVDVRSLIIPCAMAASCAFMLPIATGPNAVVFGMRQFSIGRMMKSGFWLNVACVIIVTLYFG
L
>Mature_480_residues
SNGDRQTAVSRPGLAARLGLVIGPALAILIAVLPAPEGLERGGMLVAAVLVLMAVWWATEAIPIAATSLLPLGLLPLTGV
ASLGAIAAPYADSVVLLLLGGFIMAIGIEKWHLHRRIALNVLLLSGARLKLLAGGFMLATALLSMWISNTATSLMMAPIA
LSVAVAAGGGPRLASALLLGIAYSASIGGLATPVGTPTNLIAMGWLRENTDIEISFREWMSFGLPVVLIMLPMAWLILTW
GLKSDAAAAKAAEATIRGQRNALGRMTIPESRVAIVFGVIALAWITREQLVQIPLFAGLTDMGIAILGAILMFLVPHGSR
EPEHQPGGWALLNWDDAKAVPWDVVLLFGGGLSLAAAVQASGLAGYLGNSLAELAAVPPIVLIFMVVTIIIFLTEIMSNV
AAMTTFLPILGALATATGVDVRSLIIPCAMAASCAFMLPIATGPNAVVFGMRQFSIGRMMKSGFWLNVACVIIVTLYFGL

Specific function: Mediates the transport of dicarboxylates across the cytoplasmic membrane via a Na(+)-electrochemical gradient [H]

COG id: COG0471

COG function: function code P; Di- and tricarboxylate transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SLC13A transporter (TC 2.A.47) family. NADC subfamily [H]

Homologues:

Organism=Homo sapiens, GI29171306, Length=505, Percent_Identity=35.2475247524752, Blast_Score=253, Evalue=4e-67,
Organism=Homo sapiens, GI4506979, Length=518, Percent_Identity=35.1351351351351, Blast_Score=244, Evalue=1e-64,
Organism=Homo sapiens, GI225637549, Length=567, Percent_Identity=32.2751322751323, Blast_Score=223, Evalue=4e-58,
Organism=Homo sapiens, GI225637552, Length=480, Percent_Identity=34.375, Blast_Score=210, Evalue=2e-54,
Organism=Homo sapiens, GI219802232, Length=461, Percent_Identity=34.4902386117137, Blast_Score=207, Evalue=2e-53,
Organism=Homo sapiens, GI31795546, Length=334, Percent_Identity=30.2395209580838, Blast_Score=162, Evalue=5e-40,
Organism=Homo sapiens, GI19923838, Length=329, Percent_Identity=32.8267477203647, Blast_Score=149, Evalue=4e-36,
Organism=Homo sapiens, GI31377715, Length=336, Percent_Identity=32.7380952380952, Blast_Score=149, Evalue=5e-36,
Organism=Homo sapiens, GI58761541, Length=336, Percent_Identity=32.7380952380952, Blast_Score=149, Evalue=5e-36,
Organism=Homo sapiens, GI301069353, Length=336, Percent_Identity=32.7380952380952, Blast_Score=149, Evalue=7e-36,
Organism=Homo sapiens, GI301069349, Length=319, Percent_Identity=31.0344827586207, Blast_Score=135, Evalue=1e-31,
Organism=Homo sapiens, GI301069346, Length=247, Percent_Identity=33.1983805668016, Blast_Score=118, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI71988385, Length=466, Percent_Identity=33.6909871244635, Blast_Score=228, Evalue=5e-60,
Organism=Caenorhabditis elegans, GI32565804, Length=453, Percent_Identity=33.7748344370861, Blast_Score=219, Evalue=2e-57,
Organism=Caenorhabditis elegans, GI71989118, Length=539, Percent_Identity=29.8701298701299, Blast_Score=202, Evalue=4e-52,
Organism=Caenorhabditis elegans, GI17551790, Length=503, Percent_Identity=25.844930417495, Blast_Score=188, Evalue=5e-48,
Organism=Caenorhabditis elegans, GI32564681, Length=492, Percent_Identity=28.0487804878049, Blast_Score=184, Evalue=7e-47,
Organism=Saccharomyces cerevisiae, GI6324340, Length=441, Percent_Identity=25.8503401360544, Blast_Score=114, Evalue=4e-26,
Organism=Saccharomyces cerevisiae, GI6319885, Length=492, Percent_Identity=24.7967479674797, Blast_Score=97, Evalue=5e-21,
Organism=Saccharomyces cerevisiae, GI6322263, Length=415, Percent_Identity=24.578313253012, Blast_Score=87, Evalue=7e-18,
Organism=Drosophila melanogaster, GI281362116, Length=469, Percent_Identity=30.7036247334755, Blast_Score=192, Evalue=4e-49,
Organism=Drosophila melanogaster, GI281362114, Length=469, Percent_Identity=30.4904051172708, Blast_Score=185, Evalue=5e-47,
Organism=Drosophila melanogaster, GI281362112, Length=469, Percent_Identity=30.4904051172708, Blast_Score=185, Evalue=5e-47,
Organism=Drosophila melanogaster, GI45551633, Length=491, Percent_Identity=29.5315682281059, Blast_Score=178, Evalue=7e-45,
Organism=Drosophila melanogaster, GI281366409, Length=491, Percent_Identity=29.5315682281059, Blast_Score=178, Evalue=7e-45,
Organism=Drosophila melanogaster, GI17737623, Length=491, Percent_Identity=29.5315682281059, Blast_Score=178, Evalue=7e-45,
Organism=Drosophila melanogaster, GI24666468, Length=491, Percent_Identity=29.5315682281059, Blast_Score=178, Evalue=7e-45,
Organism=Drosophila melanogaster, GI78706796, Length=456, Percent_Identity=28.5087719298246, Blast_Score=129, Evalue=3e-30,
Organism=Drosophila melanogaster, GI78706798, Length=456, Percent_Identity=28.5087719298246, Blast_Score=129, Evalue=3e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001898 [H]

Pfam domain/function: PF00939 Na_sulph_symp [H]

EC number: NA

Molecular weight: Translated: 50134; Mature: 50003

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: PS01271 NA_SULFATE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNGDRQTAVSRPGLAARLGLVIGPALAILIAVLPAPEGLERGGMLVAAVLVLMAVWWAT
CCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
EAIPIAATSLLPLGLLPLTGVASLGAIAAPYADSVVLLLLGGFIMAIGIEKWHLHRRIAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NVLLLSGARLKLLAGGFMLATALLSMWISNTATSLMMAPIALSVAVAAGGGPRLASALLL
HHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHH
GIAYSASIGGLATPVGTPTNLIAMGWLRENTDIEISFREWMSFGLPVVLIMLPMAWLILT
HHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEHHHHHHCCHHHHHHHHHHHHHHHH
WGLKSDAAAAKAAEATIRGQRNALGRMTIPESRVAIVFGVIALAWITREQLVQIPLFAGL
CCCCCCHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
TDMGIAILGAILMFLVPHGSREPEHQPGGWALLNWDDAKAVPWDVVLLFGGGLSLAAAVQ
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCHHHHHHHH
ASGLAGYLGNSLAELAAVPPIVLIFMVVTIIIFLTEIMSNVAAMTTFLPILGALATATGV
HCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DVRSLIIPCAMAASCAFMLPIATGPNAVVFGMRQFSIGRMMKSGFWLNVACVIIVTLYFG
HHHHHHHHHHHHHHHHEEEEECCCCCEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
L
C
>Mature Secondary Structure 
SNGDRQTAVSRPGLAARLGLVIGPALAILIAVLPAPEGLERGGMLVAAVLVLMAVWWAT
CCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
EAIPIAATSLLPLGLLPLTGVASLGAIAAPYADSVVLLLLGGFIMAIGIEKWHLHRRIAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NVLLLSGARLKLLAGGFMLATALLSMWISNTATSLMMAPIALSVAVAAGGGPRLASALLL
HHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHH
GIAYSASIGGLATPVGTPTNLIAMGWLRENTDIEISFREWMSFGLPVVLIMLPMAWLILT
HHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEHHHHHHCCHHHHHHHHHHHHHHHH
WGLKSDAAAAKAAEATIRGQRNALGRMTIPESRVAIVFGVIALAWITREQLVQIPLFAGL
CCCCCCHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
TDMGIAILGAILMFLVPHGSREPEHQPGGWALLNWDDAKAVPWDVVLLFGGGLSLAAAVQ
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCHHHHHHHH
ASGLAGYLGNSLAELAAVPPIVLIFMVVTIIIFLTEIMSNVAAMTTFLPILGALATATGV
HCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DVRSLIIPCAMAASCAFMLPIATGPNAVVFGMRQFSIGRMMKSGFWLNVACVIIVTLYFG
HHHHHHHHHHHHHHHHEEEEECCCCCEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
L
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA