Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
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Accession | NC_008358 |
Length | 3,705,021 |
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The map label for this gene is 114797837
Identifier: 114797837
GI number: 114797837
Start: 301420
End: 302646
Strand: Direct
Name: 114797837
Synonym: HNE_0308
Alternate gene names: NA
Gene position: 301420-302646 (Clockwise)
Preceding gene: 114797842
Following gene: 114798591
Centisome position: 8.14
GC content: 63.16
Gene sequence:
>1227_bases ATGAGACAGATCAGGACACTTTCGGTCATTCCGGTCATTCTGGCGCTCGCGTCATGTCAAACCCCGGCGCCGGAACCGAT GACCAGCGCGCCCGCCGGCGAGATGACGCTGCTGCCCTCCGAACTGCTCTCACCGGCGAGCGCCGAGGCCGCGCTGGAGC TTTACTACCGCACCCTGCCGGAAGACTTCTTCCCGCGCGCGCCGAGAGGCGTATCCCTGCCGGGCGATCAGGACGTGCTC ACCCGCATTCTCGTCGCCTCCTGCTTCAATGAAGAGACCGAAAACGCCACGGCCATGTCCACCATCGCCGCAGATGACGC TGACCTCTTCCTGATGATCGGGGACAATGTTTATGGCGACATGAACGGGCGCGCCTACGTCAACAATCAGGCCACGCTGG ACGAATTGCGCGAAAGCTTCACCGAACTTGCCGCCCGCGAAGAGTTTCAGGCCGTCCGCGCAAAACATCCGATGATGGTG GCCTGGGACGATCATGATTACGGCGCCAATGATGCGGGCCGTGAGTTTCCCTTCCGCCGCCTGGCCGAGCGCATTCACGA GCGGTTCTGGGGCCTGGAGAATGAAGACGCCGGCGCATGGCCGGGCACGTATTACGCGCGCAGCTTCGGCCCCGAGGGTC AGCGCGTGCAGATCATCATGCTCGACACCCGTTTCTTCCGCTCGCCCCTGACGCCAACCGATGAATGGGGCAAGAAGGGA AAGGAACGCTACGTTCCGTCTGTATCGGAAGGGCAGGACATGCTGGGCAATGACCAGTGGACCTGGCTGGAGAACCAGCT GCAGGACCCGGCCGATCTGCGCCTGATCGTCTCCTCGATCCAGATCCTGCCAACCGATGGCCACGGCTTTGAGGCCTGGT CCCGCCTCCCCGCCGAGCAGGAGCGCCTCTACAGCCTGGTTGCGGAAACCGAAGCCGAAGGCGTGGTCTTCGTCTCCGGC GACCGGCACACGGCCTTCCTCTACAAGGACGACGCCGCGCTGCCCTATCCGGCGTATGAGCTGACCGCCTCTTCGATGAA TGCGTCCTTTGCCGAAACAAGTTCGGAAATGGACCGGGCGCAGATCGGGGCCGGCTACGCGCCTCAGAATTTCGGCGCCA TCGACATCGACTGGAATAGCGGAACGGTGCGTCTTGCCATCAAGAGCGACACCGGCGACACCGTGAGTGAAGTGGCAGTG CCGTTCCGGGGCTCTGCCGCGCAGTAA
Upstream 100 bases:
>100_bases GCTGATGTGGCACCTGTTCTTTCAGGTTTGAGCCAATTGGTGCTTTAAACCTGTCACGAACGGCCGCTACAGTTCTCCTT CGGGTCAGCAGGAGGACAAT
Downstream 100 bases:
>100_bases TTCAGGCAGGGCGCATGAGACGCCCGCCAAGGCGAGGCGATGACTGACACACGCTCTGTTCTTGCGCTGATCCTGTCGGT CATGATCCTGCAGCTGGCAG
Product: alkaline phosphatase-like protein
Products: NA
Alternate protein names: Phosphodiesterase/Alkaline Phosphatase D-Like Protein; Alkaline Phosphatase D; Phosphodiesterase I; Phosphodiesterase; Alkaline Phosphatase D Domain-Containing Protein; Metallo-Dependent Phosphatase; Phosphodiesterase/Alkaline Phosphatase D Family Protein; Alkaline Phosphatase D-Related Protein; Alkaline Phosphatase-Like Protein
Number of amino acids: Translated: 408; Mature: 408
Protein sequence:
>408_residues MRQIRTLSVIPVILALASCQTPAPEPMTSAPAGEMTLLPSELLSPASAEAALELYYRTLPEDFFPRAPRGVSLPGDQDVL TRILVASCFNEETENATAMSTIAADDADLFLMIGDNVYGDMNGRAYVNNQATLDELRESFTELAAREEFQAVRAKHPMMV AWDDHDYGANDAGREFPFRRLAERIHERFWGLENEDAGAWPGTYYARSFGPEGQRVQIIMLDTRFFRSPLTPTDEWGKKG KERYVPSVSEGQDMLGNDQWTWLENQLQDPADLRLIVSSIQILPTDGHGFEAWSRLPAEQERLYSLVAETEAEGVVFVSG DRHTAFLYKDDAALPYPAYELTASSMNASFAETSSEMDRAQIGAGYAPQNFGAIDIDWNSGTVRLAIKSDTGDTVSEVAV PFRGSAAQ
Sequences:
>Translated_408_residues MRQIRTLSVIPVILALASCQTPAPEPMTSAPAGEMTLLPSELLSPASAEAALELYYRTLPEDFFPRAPRGVSLPGDQDVL TRILVASCFNEETENATAMSTIAADDADLFLMIGDNVYGDMNGRAYVNNQATLDELRESFTELAAREEFQAVRAKHPMMV AWDDHDYGANDAGREFPFRRLAERIHERFWGLENEDAGAWPGTYYARSFGPEGQRVQIIMLDTRFFRSPLTPTDEWGKKG KERYVPSVSEGQDMLGNDQWTWLENQLQDPADLRLIVSSIQILPTDGHGFEAWSRLPAEQERLYSLVAETEAEGVVFVSG DRHTAFLYKDDAALPYPAYELTASSMNASFAETSSEMDRAQIGAGYAPQNFGAIDIDWNSGTVRLAIKSDTGDTVSEVAV PFRGSAAQ >Mature_408_residues MRQIRTLSVIPVILALASCQTPAPEPMTSAPAGEMTLLPSELLSPASAEAALELYYRTLPEDFFPRAPRGVSLPGDQDVL TRILVASCFNEETENATAMSTIAADDADLFLMIGDNVYGDMNGRAYVNNQATLDELRESFTELAAREEFQAVRAKHPMMV AWDDHDYGANDAGREFPFRRLAERIHERFWGLENEDAGAWPGTYYARSFGPEGQRVQIIMLDTRFFRSPLTPTDEWGKKG KERYVPSVSEGQDMLGNDQWTWLENQLQDPADLRLIVSSIQILPTDGHGFEAWSRLPAEQERLYSLVAETEAEGVVFVSG DRHTAFLYKDDAALPYPAYELTASSMNASFAETSSEMDRAQIGAGYAPQNFGAIDIDWNSGTVRLAIKSDTGDTVSEVAV PFRGSAAQ
Specific function: Unknown
COG id: COG3540
COG function: function code P; Phosphodiesterase/alkaline phosphatase D
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45161; Mature: 45161
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00761 SPASE_I_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQIRTLSVIPVILALASCQTPAPEPMTSAPAGEMTLLPSELLSPASAEAALELYYRTLP CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECHHHHCCCCHHHHHHHHHHHHCC EDFFPRAPRGVSLPGDQDVLTRILVASCFNEETENATAMSTIAADDADLFLMIGDNVYGD HHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHEEECCCCCEEEEECCCEEEC MNGRAYVNNQATLDELRESFTELAAREEFQAVRAKHPMMVAWDDHDYGANDAGREFPFRR CCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHH LAERIHERFWGLENEDAGAWPGTYYARSFGPEGQRVQIIMLDTRFFRSPLTPTDEWGKKG HHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEEEEHHHHCCCCCCCHHHHCCC KERYVPSVSEGQDMLGNDQWTWLENQLQDPADLRLIVSSIQILPTDGHGFEAWSRLPAEQ HHHCCCCCCCCHHHHCCCCEEEHHHHCCCCHHHHHHEEHHEEEECCCCCHHHHHHCCHHH ERLYSLVAETEAEGVVFVSGDRHTAFLYKDDAALPYPAYELTASSMNASFAETSSEMDRA HHHHHHHHHCCCCCEEEEECCCEEEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHH QIGAGYAPQNFGAIDIDWNSGTVRLAIKSDTGDTVSEVAVPFRGSAAQ HHCCCCCCCCCCEEEEEECCCEEEEEEECCCCCCHHHHCCCCCCCCCC >Mature Secondary Structure MRQIRTLSVIPVILALASCQTPAPEPMTSAPAGEMTLLPSELLSPASAEAALELYYRTLP CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECHHHHCCCCHHHHHHHHHHHHCC EDFFPRAPRGVSLPGDQDVLTRILVASCFNEETENATAMSTIAADDADLFLMIGDNVYGD HHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHEEECCCCCEEEEECCCEEEC MNGRAYVNNQATLDELRESFTELAAREEFQAVRAKHPMMVAWDDHDYGANDAGREFPFRR CCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHH LAERIHERFWGLENEDAGAWPGTYYARSFGPEGQRVQIIMLDTRFFRSPLTPTDEWGKKG HHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEEEEHHHHCCCCCCCHHHHCCC KERYVPSVSEGQDMLGNDQWTWLENQLQDPADLRLIVSSIQILPTDGHGFEAWSRLPAEQ HHHCCCCCCCCHHHHCCCCEEEHHHHCCCCHHHHHHEEHHEEEECCCCCHHHHHHCCHHH ERLYSLVAETEAEGVVFVSGDRHTAFLYKDDAALPYPAYELTASSMNASFAETSSEMDRA HHHHHHHHHCCCCCEEEEECCCEEEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHH QIGAGYAPQNFGAIDIDWNSGTVRLAIKSDTGDTVSEVAVPFRGSAAQ HHCCCCCCCCCCEEEEEECCCEEEEEEECCCCCCHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA