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The map label for this gene is fecI [C]

Identifier: 114797785

GI number: 114797785

Start: 208103

End: 208618

Strand: Direct

Name: fecI [C]

Synonym: HNE_0218

Alternate gene names: 114797785

Gene position: 208103-208618 (Clockwise)

Preceding gene: 114800334

Following gene: 114800332

Centisome position: 5.62

GC content: 59.69

Gene sequence:

>516_bases
ATGGCCGGCCGGTCAAATACGCTGGCCTTTGAAGAACTTTACCGCAGCTATTGGAAAGACCTTTGCCGTCAGCTGCGCCG
GGCATTCGGTTCGGGACCGCCGGAACCTGAAGATGTCGCGCAGGCCGCGTTTGCGCGCTTTGCCGAGCTGGGAGACCCCG
AACAGGTACGCAATCCGCGCGCCCTGCTGCTGGTGACGGCGCGAAACATCATTCTTGACCACAAGCGCCGGAATGGACGC
CACATGGCTTATGCGCGCACGATCCAGGCGGAGCTGATCAACGCTCCCCATAACGACATTTCGCCCGAGCGGGCCCTGAT
TGACATGGAGCGCCTGGAGATCGTGAAGCGTGCCATCGACACGTTGCCCCACAAGCAGAAAGTGGTGCTCAGTCTTCACA
GGCATCACGGATATACCTACCAGCAGATTGTTGCGGAGACGGGCTGGTCGTATGGAGATGTCTACCGGCAGATGGAGGCG
GCACTCGCTTCGCTTGCATCCGCGTTGAAACGTTAA

Upstream 100 bases:

>100_bases
CCGCAACTTTCGGGACGGATTGAGCAGGGACGAGCTGGACGTGAGCGATACACCATTGAGATCCTTTCCCCTGGATCAGA
GCGGGCCGCCTGGCCCGCCG

Downstream 100 bases:

>100_bases
ACGAAGACAACCGGCCAGGATTGGGCAATCTGACGTGAAGCAGGACAACGGTAAGGGGGACCGGATCGACGCGGCAGCCC
GCAGCTGGGCGGTGTATCTG

Product: ECF subfamily RNA polymerase sigma factor

Products: NA

Alternate protein names: RNA Polymerase Sigma Factor FecI; Fec I Like Protein; RNA Polymerase Sigma Factor Sigma-70 Family; ECF Subfamily RNA Polymerase Sigma Factor; Sigma-70 Family RNA Polymerase Sigma Factor

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MAGRSNTLAFEELYRSYWKDLCRQLRRAFGSGPPEPEDVAQAAFARFAELGDPEQVRNPRALLLVTARNIILDHKRRNGR
HMAYARTIQAELINAPHNDISPERALIDMERLEIVKRAIDTLPHKQKVVLSLHRHHGYTYQQIVAETGWSYGDVYRQMEA
ALASLASALKR

Sequences:

>Translated_171_residues
MAGRSNTLAFEELYRSYWKDLCRQLRRAFGSGPPEPEDVAQAAFARFAELGDPEQVRNPRALLLVTARNIILDHKRRNGR
HMAYARTIQAELINAPHNDISPERALIDMERLEIVKRAIDTLPHKQKVVLSLHRHHGYTYQQIVAETGWSYGDVYRQMEA
ALASLASALKR
>Mature_170_residues
AGRSNTLAFEELYRSYWKDLCRQLRRAFGSGPPEPEDVAQAAFARFAELGDPEQVRNPRALLLVTARNIILDHKRRNGRH
MAYARTIQAELINAPHNDISPERALIDMERLEIVKRAIDTLPHKQKVVLSLHRHHGYTYQQIVAETGWSYGDVYRQMEAA
LASLASALKR

Specific function: Sigma Factors Are Initiation Factors That Promote The Attachment Of RNA Polymerase To Specific Initiation Sites And Are Then Released. This Sigma Factor Regulates The Fec Genes For Iron Dicitrate Transport (Probable). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19575; Mature: 19443

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGRSNTLAFEELYRSYWKDLCRQLRRAFGSGPPEPEDVAQAAFARFAELGDPEQVRNPR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHCCCC
ALLLVTARNIILDHKRRNGRHMAYARTIQAELINAPHNDISPERALIDMERLEIVKRAID
EEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
TLPHKQKVVLSLHRHHGYTYQQIVAETGWSYGDVYRQMEAALASLASALKR
HCCCHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AGRSNTLAFEELYRSYWKDLCRQLRRAFGSGPPEPEDVAQAAFARFAELGDPEQVRNPR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHCCCC
ALLLVTARNIILDHKRRNGRHMAYARTIQAELINAPHNDISPERALIDMERLEIVKRAID
EEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
TLPHKQKVVLSLHRHHGYTYQQIVAETGWSYGDVYRQMEAALASLASALKR
HCCCHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA