Click here to switch to the map view.

The map label for this gene is 114797769

Identifier: 114797769

GI number: 114797769

Start: 2551993

End: 2552586

Strand: Direct

Name: 114797769

Synonym: HNE_2440

Alternate gene names: NA

Gene position: 2551993-2552586 (Clockwise)

Preceding gene: 114798127

Following gene: 114797870

Centisome position: 68.88

GC content: 63.8

Gene sequence:

>594_bases
ATGTCGATAGAGAAAACGAAGATGCCCAGAATTCGCCGGTCCCCCGAAGCGTCGCGGGAAAACATCCTGATCGCGGCCGA
AGGCCTGCTGGTGCAGCAGGGACCGCAATCCCTGCGGCTGGCCGACGTGGCCAAAGCGGCGGGGGTGGCGAACGCGACGG
TGCTGCATCATTTTGGCACCATCGACGGCGTTCAGACAGCGCTGATGGAGAAGATGATCGGCGAGCTGGTCAGCGGGCTT
CTGGAGATGGATCTGCCGGCGGACCCGAAGGCGGCGCGCGCGATCGCGCTCACTCGCCTGTTTGATGCCTTCGAGGCCAA
GGGCGCGGCGCGGCTGGCCGCGTGGCTGGAACTGACTGATGAATCGCGCCGCCTGCGGACAGTGCGCGAGGCGGTGCAGA
CGGTCATCCGCCAAAAGATCAATCAGGCGGATATGTCAGAGGCGCAGCTGGAGGATTCAATCCTCATCAGCGTGATCCTC
GCCATCGGGGTGGGCCTGTTCGGGCCGACGCTGGGGGAGCTGTTGGGGAAACCGCCCGAACGGGCCCGGCAGATTGCCGT
GAAGTTGCTGGAATCAGATTTCAGCAAAAGCTGA

Upstream 100 bases:

>100_bases
AGGGGACTGTTTCATGGCCATCTCGCAAATCCGGCTTACAAGGAGCGGGCAGAGCCTTTAAGGCTGCCTATTTGCTGATA
TATAGGCGCTACTGACAAAA

Downstream 100 bases:

>100_bases
GCGCCCGATTGCCGCGAGGCAGCAACCGGGCGTTTCAGAGCGGTATCAGTTCTTGCGGCCGCTGGTCGGGATATCCTTGA
AGGCCACATTCTTGTCGACG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family Protein

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MSIEKTKMPRIRRSPEASRENILIAAEGLLVQQGPQSLRLADVAKAAGVANATVLHHFGTIDGVQTALMEKMIGELVSGL
LEMDLPADPKAARAIALTRLFDAFEAKGAARLAAWLELTDESRRLRTVREAVQTVIRQKINQADMSEAQLEDSILISVIL
AIGVGLFGPTLGELLGKPPERARQIAVKLLESDFSKS

Sequences:

>Translated_197_residues
MSIEKTKMPRIRRSPEASRENILIAAEGLLVQQGPQSLRLADVAKAAGVANATVLHHFGTIDGVQTALMEKMIGELVSGL
LEMDLPADPKAARAIALTRLFDAFEAKGAARLAAWLELTDESRRLRTVREAVQTVIRQKINQADMSEAQLEDSILISVIL
AIGVGLFGPTLGELLGKPPERARQIAVKLLESDFSKS
>Mature_196_residues
SIEKTKMPRIRRSPEASRENILIAAEGLLVQQGPQSLRLADVAKAAGVANATVLHHFGTIDGVQTALMEKMIGELVSGLL
EMDLPADPKAARAIALTRLFDAFEAKGAARLAAWLELTDESRRLRTVREAVQTVIRQKINQADMSEAQLEDSILISVILA
IGVGLFGPTLGELLGKPPERARQIAVKLLESDFSKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21332; Mature: 21201

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIEKTKMPRIRRSPEASRENILIAAEGLLVQQGPQSLRLADVAKAAGVANATVLHHFGT
CCCCCCCCCHHHCCCCCCCCCEEEEECCCHHHCCCHHHHHHHHHHHHCHHHHHHHHHHCC
IDGVQTALMEKMIGELVSGLLEMDLPADPKAARAIALTRLFDAFEAKGAARLAAWLELTD
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
ESRRLRTVREAVQTVIRQKINQADMSEAQLEDSILISVILAIGVGLFGPTLGELLGKPPE
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
RARQIAVKLLESDFSKS
HHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SIEKTKMPRIRRSPEASRENILIAAEGLLVQQGPQSLRLADVAKAAGVANATVLHHFGT
CCCCCCCCHHHCCCCCCCCCEEEEECCCHHHCCCHHHHHHHHHHHHCHHHHHHHHHHCC
IDGVQTALMEKMIGELVSGLLEMDLPADPKAARAIALTRLFDAFEAKGAARLAAWLELTD
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
ESRRLRTVREAVQTVIRQKINQADMSEAQLEDSILISVILAIGVGLFGPTLGELLGKPPE
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
RARQIAVKLLESDFSKS
HHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA