Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
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Accession | NC_008358 |
Length | 3,705,021 |
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The map label for this gene is hcpA [H]
Identifier: 114797412
GI number: 114797412
Start: 439717
End: 440322
Strand: Direct
Name: hcpA [H]
Synonym: HNE_0443
Alternate gene names: 114797412
Gene position: 439717-440322 (Clockwise)
Preceding gene: 114800448
Following gene: 114798870
Centisome position: 11.87
GC content: 60.89
Gene sequence:
>606_bases ATGAAAAAGGTTCTCATGATGCTGAGCGCTGCCGGAATGGTGGCTGCGCTTGCCCTGCCGGTATACGCGCAAGGAATTGG GGGGCGCGTCGAGCGTACCCAGGCCGAACTCGCCATCGAAAAGGCGGAGGCTGACTTTGCCACGCTCAAGGTGGCCCGTG ATGAGGCCAGAACCAAATGCGCTGCCCGCGAATATCAGGCCTGCTACGAGCTCGCCGAATTGCAGCGTAAAGGTCTCGGC GGTGTGCAAGATCTGTCTGCGGCGGCCGAAAATTACAAGAAAGGCTGCGATGCCAAGGATGCGCGCGGCTGTGCGGGCCT AGCCTATCTGACGGTACAGGGCCGCGGCGTCACAGCAAACCTCGCTGAGGGTCGCCGCCTCTACAAGGAATCCTGCGATA TGGGCGAAGTCAGCGGCTGCGCGGCCTGGGGTAACATGGCCTATACCGGCACAGGCGGCCCCAAGGATGTCCAGGGCGGC ACGCGCGCCCTGAATGAAGCCTGTTCAAAGGATTATGAATGGGCCTGCGAGCGTGTTCAAACGCTTGGCGCGTTCGATCC CGATGACAATTCCATGCAGCGTCTGCGCAACCTGCAGAACAACTAG
Upstream 100 bases:
>100_bases CCTCTCTATCTGGGGGATACTGCAATCTAATACCGGCTTTGCCCCAGCCTTGCCCAAATCTGCCGTTAGAACATCCCACA AGGAAAAGGAGACCTGACCC
Downstream 100 bases:
>100_bases ACGGCTGTGCTGGCCGGCGGCTCACTCCGGGCCGGCGCCAGAATGGACAGGGTTTTCGCCCGCTCGGCATGGGCGGGCGA ACGCTCGGGTGAGATCAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: Cysteine-rich 28 kDa protein [H]
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MKKVLMMLSAAGMVAALALPVYAQGIGGRVERTQAELAIEKAEADFATLKVARDEARTKCAAREYQACYELAELQRKGLG GVQDLSAAAENYKKGCDAKDARGCAGLAYLTVQGRGVTANLAEGRRLYKESCDMGEVSGCAAWGNMAYTGTGGPKDVQGG TRALNEACSKDYEWACERVQTLGAFDPDDNSMQRLRNLQNN
Sequences:
>Translated_201_residues MKKVLMMLSAAGMVAALALPVYAQGIGGRVERTQAELAIEKAEADFATLKVARDEARTKCAAREYQACYELAELQRKGLG GVQDLSAAAENYKKGCDAKDARGCAGLAYLTVQGRGVTANLAEGRRLYKESCDMGEVSGCAAWGNMAYTGTGGPKDVQGG TRALNEACSKDYEWACERVQTLGAFDPDDNSMQRLRNLQNN >Mature_201_residues MKKVLMMLSAAGMVAALALPVYAQGIGGRVERTQAELAIEKAEADFATLKVARDEARTKCAAREYQACYELAELQRKGLG GVQDLSAAAENYKKGCDAKDARGCAGLAYLTVQGRGVTANLAEGRRLYKESCDMGEVSGCAAWGNMAYTGTGGPKDVQGG TRALNEACSKDYEWACERVQTLGAFDPDDNSMQRLRNLQNN
Specific function: Slowly hydrolyzes 6-aminopenicillinic acid and 7- aminocephalosporanic acid (ACA) derivatives. May be involved in the synthesis of the cell wall peptidoglycan [H]
COG id: COG0790
COG function: function code R; FOG: TPR repeat, SEL1 subfamily
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 5 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006597 - InterPro: IPR011990 [H]
Pfam domain/function: PF08238 Sel1 [H]
EC number: =3.5.2.6 [H]
Molecular weight: Translated: 21534; Mature: 21534
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVLMMLSAAGMVAALALPVYAQGIGGRVERTQAELAIEKAEADFATLKVARDEARTKC CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH AAREYQACYELAELQRKGLGGVQDLSAAAENYKKGCDAKDARGCAGLAYLTVQGRGVTAN HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCC LAEGRRLYKESCDMGEVSGCAAWGNMAYTGTGGPKDVQGGTRALNEACSKDYEWACERVQ HHHHHHHHHHCCCCCCCCCHHHCCCEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHH TLGAFDPDDNSMQRLRNLQNN HHCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure MKKVLMMLSAAGMVAALALPVYAQGIGGRVERTQAELAIEKAEADFATLKVARDEARTKC CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH AAREYQACYELAELQRKGLGGVQDLSAAAENYKKGCDAKDARGCAGLAYLTVQGRGVTAN HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCC LAEGRRLYKESCDMGEVSGCAAWGNMAYTGTGGPKDVQGGTRALNEACSKDYEWACERVQ HHHHHHHHHHCCCCCCCCCHHHCCCEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHH TLGAFDPDDNSMQRLRNLQNN HHCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]