Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is hcpA [H]

Identifier: 114797412

GI number: 114797412

Start: 439717

End: 440322

Strand: Direct

Name: hcpA [H]

Synonym: HNE_0443

Alternate gene names: 114797412

Gene position: 439717-440322 (Clockwise)

Preceding gene: 114800448

Following gene: 114798870

Centisome position: 11.87

GC content: 60.89

Gene sequence:

>606_bases
ATGAAAAAGGTTCTCATGATGCTGAGCGCTGCCGGAATGGTGGCTGCGCTTGCCCTGCCGGTATACGCGCAAGGAATTGG
GGGGCGCGTCGAGCGTACCCAGGCCGAACTCGCCATCGAAAAGGCGGAGGCTGACTTTGCCACGCTCAAGGTGGCCCGTG
ATGAGGCCAGAACCAAATGCGCTGCCCGCGAATATCAGGCCTGCTACGAGCTCGCCGAATTGCAGCGTAAAGGTCTCGGC
GGTGTGCAAGATCTGTCTGCGGCGGCCGAAAATTACAAGAAAGGCTGCGATGCCAAGGATGCGCGCGGCTGTGCGGGCCT
AGCCTATCTGACGGTACAGGGCCGCGGCGTCACAGCAAACCTCGCTGAGGGTCGCCGCCTCTACAAGGAATCCTGCGATA
TGGGCGAAGTCAGCGGCTGCGCGGCCTGGGGTAACATGGCCTATACCGGCACAGGCGGCCCCAAGGATGTCCAGGGCGGC
ACGCGCGCCCTGAATGAAGCCTGTTCAAAGGATTATGAATGGGCCTGCGAGCGTGTTCAAACGCTTGGCGCGTTCGATCC
CGATGACAATTCCATGCAGCGTCTGCGCAACCTGCAGAACAACTAG

Upstream 100 bases:

>100_bases
CCTCTCTATCTGGGGGATACTGCAATCTAATACCGGCTTTGCCCCAGCCTTGCCCAAATCTGCCGTTAGAACATCCCACA
AGGAAAAGGAGACCTGACCC

Downstream 100 bases:

>100_bases
ACGGCTGTGCTGGCCGGCGGCTCACTCCGGGCCGGCGCCAGAATGGACAGGGTTTTCGCCCGCTCGGCATGGGCGGGCGA
ACGCTCGGGTGAGATCAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: Cysteine-rich 28 kDa protein [H]

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MKKVLMMLSAAGMVAALALPVYAQGIGGRVERTQAELAIEKAEADFATLKVARDEARTKCAAREYQACYELAELQRKGLG
GVQDLSAAAENYKKGCDAKDARGCAGLAYLTVQGRGVTANLAEGRRLYKESCDMGEVSGCAAWGNMAYTGTGGPKDVQGG
TRALNEACSKDYEWACERVQTLGAFDPDDNSMQRLRNLQNN

Sequences:

>Translated_201_residues
MKKVLMMLSAAGMVAALALPVYAQGIGGRVERTQAELAIEKAEADFATLKVARDEARTKCAAREYQACYELAELQRKGLG
GVQDLSAAAENYKKGCDAKDARGCAGLAYLTVQGRGVTANLAEGRRLYKESCDMGEVSGCAAWGNMAYTGTGGPKDVQGG
TRALNEACSKDYEWACERVQTLGAFDPDDNSMQRLRNLQNN
>Mature_201_residues
MKKVLMMLSAAGMVAALALPVYAQGIGGRVERTQAELAIEKAEADFATLKVARDEARTKCAAREYQACYELAELQRKGLG
GVQDLSAAAENYKKGCDAKDARGCAGLAYLTVQGRGVTANLAEGRRLYKESCDMGEVSGCAAWGNMAYTGTGGPKDVQGG
TRALNEACSKDYEWACERVQTLGAFDPDDNSMQRLRNLQNN

Specific function: Slowly hydrolyzes 6-aminopenicillinic acid and 7- aminocephalosporanic acid (ACA) derivatives. May be involved in the synthesis of the cell wall peptidoglycan [H]

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 5 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: =3.5.2.6 [H]

Molecular weight: Translated: 21534; Mature: 21534

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVLMMLSAAGMVAALALPVYAQGIGGRVERTQAELAIEKAEADFATLKVARDEARTKC
CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
AAREYQACYELAELQRKGLGGVQDLSAAAENYKKGCDAKDARGCAGLAYLTVQGRGVTAN
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCC
LAEGRRLYKESCDMGEVSGCAAWGNMAYTGTGGPKDVQGGTRALNEACSKDYEWACERVQ
HHHHHHHHHHCCCCCCCCCHHHCCCEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHH
TLGAFDPDDNSMQRLRNLQNN
HHCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MKKVLMMLSAAGMVAALALPVYAQGIGGRVERTQAELAIEKAEADFATLKVARDEARTKC
CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
AAREYQACYELAELQRKGLGGVQDLSAAAENYKKGCDAKDARGCAGLAYLTVQGRGVTAN
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCC
LAEGRRLYKESCDMGEVSGCAAWGNMAYTGTGGPKDVQGGTRALNEACSKDYEWACERVQ
HHHHHHHHHHCCCCCCCCCHHHCCCEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHH
TLGAFDPDDNSMQRLRNLQNN
HHCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]