| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114797407
Identifier: 114797407
GI number: 114797407
Start: 3310088
End: 3310489
Strand: Reverse
Name: 114797407
Synonym: HNE_3130
Alternate gene names: NA
Gene position: 3310489-3310088 (Counterclockwise)
Preceding gene: 114797878
Following gene: 114799789
Centisome position: 89.35
GC content: 65.17
Gene sequence:
>402_bases ATGTCTGACGCAGCGGAAATCATCGAGACGGTCAAAGGGCAGGGGGATGTCTACCTGCCCAAGACGATCCAGCGCAATGA GCGCCTGGCCCGAGGGCTGGTGCCAAAGCTGATGCGTGTGGCCGGGAGACTGCCTTTCGCCGACGATCTGGCGGCGGCTT ACTATGCAGCGCGTGACCCGCGCACACCGATGAAGGCAAAGGCGATCCTGTTTGGGGCGGCGGCCTATTTCGTGCTGCCC GTGGATCTGGTGCCTGATGTGGTGGTGGGCCTTGGCTTCACCGATGACGCCACGGTGCTGGCCACCGCGCTCAGCGTCGT GGGCATGCACGTGAAGGAAAGCCACCGCTCACTGGCCCGCAAGCTCCTCAGCCTTCCGGAGCCCGTGCGGGACGCCCCGT GA
Upstream 100 bases:
>100_bases TAATGACGGCGGAGATGTTTGAATTAAGTTCCATGGGGCACTGCCCTCCTTAGTTTTCGAAAACGGCGGACTTCAATTAT AATGCCCCTAGGAGAGCGCA
Downstream 100 bases:
>100_bases CGCTCTGGTTGCCGCTTGGCCTGGCCGGGCTTCTGGCAATTACCTATGGTTTCACGCTGAGCCGCAGCCCGCCGGGCCCG GCCAAGCTGTTGCTCAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MSDAAEIIETVKGQGDVYLPKTIQRNERLARGLVPKLMRVAGRLPFADDLAAAYYAARDPRTPMKAKAILFGAAAYFVLP VDLVPDVVVGLGFTDDATVLATALSVVGMHVKESHRSLARKLLSLPEPVRDAP
Sequences:
>Translated_133_residues MSDAAEIIETVKGQGDVYLPKTIQRNERLARGLVPKLMRVAGRLPFADDLAAAYYAARDPRTPMKAKAILFGAAAYFVLP VDLVPDVVVGLGFTDDATVLATALSVVGMHVKESHRSLARKLLSLPEPVRDAP >Mature_132_residues SDAAEIIETVKGQGDVYLPKTIQRNERLARGLVPKLMRVAGRLPFADDLAAAYYAARDPRTPMKAKAILFGAAAYFVLPV DLVPDVVVGLGFTDDATVLATALSVVGMHVKESHRSLARKLLSLPEPVRDAP
Specific function: Unknown
COG id: COG3339
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14326; Mature: 14195
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDAAEIIETVKGQGDVYLPKTIQRNERLARGLVPKLMRVAGRLPFADDLAAAYYAARDP CCHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC RTPMKAKAILFGAAAYFVLPVDLVPDVVVGLGFTDDATVLATALSVVGMHVKESHRSLAR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH KLLSLPEPVRDAP HHHHCCCCCCCCC >Mature Secondary Structure SDAAEIIETVKGQGDVYLPKTIQRNERLARGLVPKLMRVAGRLPFADDLAAAYYAARDP CHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC RTPMKAKAILFGAAAYFVLPVDLVPDVVVGLGFTDDATVLATALSVVGMHVKESHRSLAR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH KLLSLPEPVRDAP HHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA