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The map label for this gene is viuA [H]

Identifier: 114797306

GI number: 114797306

Start: 2513938

End: 2516421

Strand: Direct

Name: viuA [H]

Synonym: HNE_2408

Alternate gene names: 114797306

Gene position: 2513938-2516421 (Clockwise)

Preceding gene: 114797542

Following gene: 114800324

Centisome position: 67.85

GC content: 62.04

Gene sequence:

>2484_bases
ATGAAATTCCGCATCCTTTCCGCAACCGCCGTTGCCGCCCTTGGCGTCTCCGGCCAGCTTTCCGCCTTTGCAGACGCGCC
TGACGCAGAAGACTCGCGCCGCCTGGAAGTCGTCACCGTGACGACCCAGAAGACCGAGCAGTCGCTGATCGATGTTCCGA
TCAACATCTCCGTGACCGACCAGGACCTGATCGACAAGCTGGGCGGCGACGACATTGAAGACCTCGCCAACTTCATTCCC
GGCCTGCAGGTGCAGGCACAGAGCCTCAACGCGCCGACCTATTCGCTGCGCGGGGTTGTGGCCGATGGCGGCGCGCCGCG
CGTTGCGATCTTCCAGAACGGCGTGTCCATCGGGACGCCGGGCTATGCCACCAGCATCGCCATCTATGACGTTGAGCGCG
TCGAAGTTGTGAAAGGCCCGCAGGCAACCCTGTTTGGCCAGGGCGCCCTGATCGGCGGCATCAACTACATTCAGAACCGC
GCCTCGACCGAAGGCAATGAAGGCAAGGTAACTGTTGAAGGCGGCGATTACAGCTTCCTGCGCGGCGAAGGCTTCTACAA
CTTCGCGCTGAGCGACACGCTGGCCGTTCGCGTGGCCGGCCAGATCAAGAATATGGACGGGTATGTTCCGAACACGGCGA
ACTCTCCCGACCTGATGGGCCAGGACACGACCGCTGTTCGCGGCGCGATCCATTGGGAGCCGACCCCGGCGGTTACCGCC
GATGTGTTCGTCAACTATCAGGAAGACGACTCCACCGGCACGCAGTTCACCTCCGGCTTCTTCCCCGTAAACGGCGTTGT
GGACCCCTACGGCCCGACGGCGATGAACATCAACGCCGACCAGGTGCGCAGCAAGCTGGGCAATGACCGCGAGATCCTCG
CCGGTACGGCCAACCTGGAATTCGTGCTGAACGACGCCTGGACGCTGACCTCGCTGACCGACTATCGCGAGCTGAGCTCG
AACGAAGCCTGGGATTCGGATGGCGCAGCCTTCAACCTGCTGCAATTCTATCAGACCCGCGAAGGCGACGCCCTGAGCCA
GGAACTGCGCGTCAACTATGACAATGGCGGCAAGCTGACCGGCTTCTTCGGCGCCAACTATTTCGACTATGAAACCCGCG
ACACGCTGACCTTCTCGACCGATGAAGCGTATGCACAGTCGCTGTTCGGCCCGCAGGTTGCGGCATCGGTAGGCGGCATG
GCGAACGCCCGCCGCATTCTGGCGCTGGCCGGCGCGCCCGGCGCAGCCAACTTCGGCAGCTTTGAAACACCGTTCCAGTA
TTCGGTGGCACAAATCCTGGCGCAGTACGGCGCGCAGGCTGCCAATAACATCGCGGAAGCCGACATGGTGTTCGGCCCCT
TCCTGGCACTCAATCCGGCCCACGCCGAACGCTCGCGCACCTCTGATGGTCGCACGAGCTACGACCTCTTCGGCGACATC
ACCTATGATCTGACCGATCGCCTGACGCTGACCGGTGGTCTGCGCTACACGATCAACGAGCTGTCTGCGTCCAACACCGG
CGAAGTGCTTCGCGGCAACCCGGCACTCGGCGGCGCCCTCAACGGCGTGACCTTTGCGCCGGGCTTCCTGATCAACGCAG
CGACCATCGGCAACCCGGTCAACGCTTCGGCCGAGCCGGACGGCGCCTTCACCTGGCGTCTCAACGCGGCTTACCGCGTC
TCCGATAACGTCAACACCTGGGTGTCGTATGGCCGTGGCCGCCGCCCGGAAACGCTGTCGATTTCTGGCCGCAACGTCTC
GGAAATCGATGCCGAGACACTGGACAACGTGGAAGCCGGCATGTTCGGCCGCTTCTTCGACGACCGCCTGCAGATGACGA
CCTCTGTGTATTACGGCCAGTACGAGAACTTCCAGACCAGCCGCTTTGACCCGATCAACGGCGTATTCATTGTCGAAAAC
TCCGGCAACGCCACACAGTATGGTCTCGAGTTCGACGGCCAGGCGCTGGTGACCGACAATATCCGCCTGCTGGGCACCTA
TGCCTACAACTTCTCTGAGTATGATGACGAAGACAGCAACGGGAACCCGCTGCAGTTTGCCGGTAACCGGTTCCGGATGA
GCCCGGAGCAGAGCTTCTCTCTGGCCGCCGATATCACCCTTCCGTTCGCTGAGCACGGCACCTTCTCGCTCACGCCGAGC
TATATCTGGAAGGGTCAGCAATACTTCGAGGACGACAACGGCTACGACTATGCGGCCGATGGCAATGGCGGGTTCGTTCG
CCGCCGGGAAACCTATCCTGACGGGACGCCAGTGGTCGAAGAAACCGGTGCTTATGGCCTGGTCAACCTGCGCGCAGGCT
TTGACAGCGCCGATGAACGCTGGGGCGTCTATGTGCTGGGCGAGAACCTTCTGGACGAAGAGTATCTGATCGATGTCGGC
AACACCGGCGGCGCGTTCGGCCTGCACACCATCATCCGCGGCAAGCCGCAGATGCTGAAAGCCGGCGCCTACGTGAAATT
CTGA

Upstream 100 bases:

>100_bases
AACGCATTAGTTTCGCAAAACCTTGATTTGAACGCTTGCGAGGCGCTCGTTAACGACCCGGCAACCGGCGCTCTGCTGCG
CCGCAACACCGGGGTATGAC

Downstream 100 bases:

>100_bases
TCCGGGCAAAGAGGAGACCTCTGCCATGAAATATGTCGTCGCAATTGCCGCCATCATGCTGGCGGCTTGCAGCGCGGCCC
CTGTTGCAGGCTCGGAGGAG

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 827; Mature: 827

Protein sequence:

>827_residues
MKFRILSATAVAALGVSGQLSAFADAPDAEDSRRLEVVTVTTQKTEQSLIDVPINISVTDQDLIDKLGGDDIEDLANFIP
GLQVQAQSLNAPTYSLRGVVADGGAPRVAIFQNGVSIGTPGYATSIAIYDVERVEVVKGPQATLFGQGALIGGINYIQNR
ASTEGNEGKVTVEGGDYSFLRGEGFYNFALSDTLAVRVAGQIKNMDGYVPNTANSPDLMGQDTTAVRGAIHWEPTPAVTA
DVFVNYQEDDSTGTQFTSGFFPVNGVVDPYGPTAMNINADQVRSKLGNDREILAGTANLEFVLNDAWTLTSLTDYRELSS
NEAWDSDGAAFNLLQFYQTREGDALSQELRVNYDNGGKLTGFFGANYFDYETRDTLTFSTDEAYAQSLFGPQVAASVGGM
ANARRILALAGAPGAANFGSFETPFQYSVAQILAQYGAQAANNIAEADMVFGPFLALNPAHAERSRTSDGRTSYDLFGDI
TYDLTDRLTLTGGLRYTINELSASNTGEVLRGNPALGGALNGVTFAPGFLINAATIGNPVNASAEPDGAFTWRLNAAYRV
SDNVNTWVSYGRGRRPETLSISGRNVSEIDAETLDNVEAGMFGRFFDDRLQMTTSVYYGQYENFQTSRFDPINGVFIVEN
SGNATQYGLEFDGQALVTDNIRLLGTYAYNFSEYDDEDSNGNPLQFAGNRFRMSPEQSFSLAADITLPFAEHGTFSLTPS
YIWKGQQYFEDDNGYDYAADGNGGFVRRRETYPDGTPVVEETGAYGLVNLRAGFDSADERWGVYVLGENLLDEEYLIDVG
NTGGAFGLHTIIRGKPQMLKAGAYVKF

Sequences:

>Translated_827_residues
MKFRILSATAVAALGVSGQLSAFADAPDAEDSRRLEVVTVTTQKTEQSLIDVPINISVTDQDLIDKLGGDDIEDLANFIP
GLQVQAQSLNAPTYSLRGVVADGGAPRVAIFQNGVSIGTPGYATSIAIYDVERVEVVKGPQATLFGQGALIGGINYIQNR
ASTEGNEGKVTVEGGDYSFLRGEGFYNFALSDTLAVRVAGQIKNMDGYVPNTANSPDLMGQDTTAVRGAIHWEPTPAVTA
DVFVNYQEDDSTGTQFTSGFFPVNGVVDPYGPTAMNINADQVRSKLGNDREILAGTANLEFVLNDAWTLTSLTDYRELSS
NEAWDSDGAAFNLLQFYQTREGDALSQELRVNYDNGGKLTGFFGANYFDYETRDTLTFSTDEAYAQSLFGPQVAASVGGM
ANARRILALAGAPGAANFGSFETPFQYSVAQILAQYGAQAANNIAEADMVFGPFLALNPAHAERSRTSDGRTSYDLFGDI
TYDLTDRLTLTGGLRYTINELSASNTGEVLRGNPALGGALNGVTFAPGFLINAATIGNPVNASAEPDGAFTWRLNAAYRV
SDNVNTWVSYGRGRRPETLSISGRNVSEIDAETLDNVEAGMFGRFFDDRLQMTTSVYYGQYENFQTSRFDPINGVFIVEN
SGNATQYGLEFDGQALVTDNIRLLGTYAYNFSEYDDEDSNGNPLQFAGNRFRMSPEQSFSLAADITLPFAEHGTFSLTPS
YIWKGQQYFEDDNGYDYAADGNGGFVRRRETYPDGTPVVEETGAYGLVNLRAGFDSADERWGVYVLGENLLDEEYLIDVG
NTGGAFGLHTIIRGKPQMLKAGAYVKF
>Mature_827_residues
MKFRILSATAVAALGVSGQLSAFADAPDAEDSRRLEVVTVTTQKTEQSLIDVPINISVTDQDLIDKLGGDDIEDLANFIP
GLQVQAQSLNAPTYSLRGVVADGGAPRVAIFQNGVSIGTPGYATSIAIYDVERVEVVKGPQATLFGQGALIGGINYIQNR
ASTEGNEGKVTVEGGDYSFLRGEGFYNFALSDTLAVRVAGQIKNMDGYVPNTANSPDLMGQDTTAVRGAIHWEPTPAVTA
DVFVNYQEDDSTGTQFTSGFFPVNGVVDPYGPTAMNINADQVRSKLGNDREILAGTANLEFVLNDAWTLTSLTDYRELSS
NEAWDSDGAAFNLLQFYQTREGDALSQELRVNYDNGGKLTGFFGANYFDYETRDTLTFSTDEAYAQSLFGPQVAASVGGM
ANARRILALAGAPGAANFGSFETPFQYSVAQILAQYGAQAANNIAEADMVFGPFLALNPAHAERSRTSDGRTSYDLFGDI
TYDLTDRLTLTGGLRYTINELSASNTGEVLRGNPALGGALNGVTFAPGFLINAATIGNPVNASAEPDGAFTWRLNAAYRV
SDNVNTWVSYGRGRRPETLSISGRNVSEIDAETLDNVEAGMFGRFFDDRLQMTTSVYYGQYENFQTSRFDPINGVFIVEN
SGNATQYGLEFDGQALVTDNIRLLGTYAYNFSEYDDEDSNGNPLQFAGNRFRMSPEQSFSLAADITLPFAEHGTFSLTPS
YIWKGQQYFEDDNGYDYAADGNGGFVRRRETYPDGTPVVEETGAYGLVNLRAGFDSADERWGVYVLGENLLDEEYLIDVG
NTGGAFGLHTIIRGKPQMLKAGAYVKF

Specific function: Receptor for ferric vibriobactin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1788478, Length=148, Percent_Identity=30.4054054054054, Blast_Score=64, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug [H]

EC number: NA

Molecular weight: Translated: 89374; Mature: 89374

Theoretical pI: Translated: 4.08; Mature: 4.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFRILSATAVAALGVSGQLSAFADAPDAEDSRRLEVVTVTTQKTEQSLIDVPINISVTD
CEEEEEEHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEECEEEEECC
QDLIDKLGGDDIEDLANFIPGLQVQAQSLNAPTYSLRGVVADGGAPRVAIFQNGVSIGTP
HHHHHHHCCCCHHHHHHHCCCCEEEEECCCCCCEEEEEEEECCCCCEEEEEECCCCCCCC
GYATSIAIYDVERVEVVKGPQATLFGQGALIGGINYIQNRASTEGNEGKVTVEGGDYSFL
CCEEEEEEEEEEEEEEECCCCEEEEECCEEECCHHHHHHCCCCCCCCCEEEEECCCEEEE
RGEGFYNFALSDTLAVRVAGQIKNMDGYVPNTANSPDLMGQDTTAVRGAIHWEPTPAVTA
ECCCEEEEEECCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHEEEEEECCCCCEEE
DVFVNYQEDDSTGTQFTSGFFPVNGVVDPYGPTAMNINADQVRSKLGNDREILAGTANLE
EEEEEEECCCCCCCEEECCEEECCCCCCCCCCEEECCCHHHHHHHHCCCCEEEEECCCEE
FVLNDAWTLTSLTDYRELSSNEAWDSDGAAFNLLQFYQTREGDALSQELRVNYDNGGKLT
EEEECCEEEEEHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCEEE
GFFGANYFDYETRDTLTFSTDEAYAQSLFGPQVAASVGGMANARRILALAGAPGAANFGS
EEECCCEECCCCCCEEEEECCHHHHHHHCCCHHHHHHCCCCCCEEEEEEECCCCCCCCCC
FETPFQYSVAQILAQYGAQAANNIAEADMVFGPFLALNPAHAERSRTSDGRTSYDLFGDI
CCCCHHHHHHHHHHHHCHHHHCCHHHHHHHCCCCEEECCCHHHHCCCCCCCEEEEEEEEE
TYDLTDRLTLTGGLRYTINELSASNTGEVLRGNPALGGALNGVTFAPGFLINAATIGNPV
EECCCCEEEEECCCEEEEEECCCCCCCCEEECCCCCCCCCCCCEECCCEEEEHHHCCCCC
NASAEPDGAFTWRLNAAYRVSDNVNTWVSYGRGRRPETLSISGRNVSEIDAETLDNVEAG
CCCCCCCCEEEEEEEEEEEECCCCHHHHHCCCCCCCCEEEECCCCCHHCCHHHHCCCCCC
MFGRFFDDRLQMTTSVYYGQYENFQTSRFDPINGVFIVENSGNATQYGLEFDGQALVTDN
HHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCEEECEEECCCEEEECC
IRLLGTYAYNFSEYDDEDSNGNPLQFAGNRFRMSPEQSFSLAADITLPFAEHGTFSLTPS
EEEEEEEEECCCCCCCCCCCCCEEEECCCEEECCCCCCCEEEEEEEEEECCCCCEEECHH
YIWKGQQYFEDDNGYDYAADGNGGFVRRRETYPDGTPVVEETGAYGLVNLRAGFDSADER
HHCCCHHEEECCCCEEEEECCCCCEEEEECCCCCCCCCEECCCCEEEEEEECCCCCCCCC
WGVYVLGENLLDEEYLIDVGNTGGAFGLHTIIRGKPQMLKAGAYVKF
CEEEEECCCCCCCEEEEEECCCCCCHHHHHHHCCCHHHEECCCEECC
>Mature Secondary Structure
MKFRILSATAVAALGVSGQLSAFADAPDAEDSRRLEVVTVTTQKTEQSLIDVPINISVTD
CEEEEEEHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEECEEEEECC
QDLIDKLGGDDIEDLANFIPGLQVQAQSLNAPTYSLRGVVADGGAPRVAIFQNGVSIGTP
HHHHHHHCCCCHHHHHHHCCCCEEEEECCCCCCEEEEEEEECCCCCEEEEEECCCCCCCC
GYATSIAIYDVERVEVVKGPQATLFGQGALIGGINYIQNRASTEGNEGKVTVEGGDYSFL
CCEEEEEEEEEEEEEEECCCCEEEEECCEEECCHHHHHHCCCCCCCCCEEEEECCCEEEE
RGEGFYNFALSDTLAVRVAGQIKNMDGYVPNTANSPDLMGQDTTAVRGAIHWEPTPAVTA
ECCCEEEEEECCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHEEEEEECCCCCEEE
DVFVNYQEDDSTGTQFTSGFFPVNGVVDPYGPTAMNINADQVRSKLGNDREILAGTANLE
EEEEEEECCCCCCCEEECCEEECCCCCCCCCCEEECCCHHHHHHHHCCCCEEEEECCCEE
FVLNDAWTLTSLTDYRELSSNEAWDSDGAAFNLLQFYQTREGDALSQELRVNYDNGGKLT
EEEECCEEEEEHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCEEE
GFFGANYFDYETRDTLTFSTDEAYAQSLFGPQVAASVGGMANARRILALAGAPGAANFGS
EEECCCEECCCCCCEEEEECCHHHHHHHCCCHHHHHHCCCCCCEEEEEEECCCCCCCCCC
FETPFQYSVAQILAQYGAQAANNIAEADMVFGPFLALNPAHAERSRTSDGRTSYDLFGDI
CCCCHHHHHHHHHHHHCHHHHCCHHHHHHHCCCCEEECCCHHHHCCCCCCCEEEEEEEEE
TYDLTDRLTLTGGLRYTINELSASNTGEVLRGNPALGGALNGVTFAPGFLINAATIGNPV
EECCCCEEEEECCCEEEEEECCCCCCCCEEECCCCCCCCCCCCEECCCEEEEHHHCCCCC
NASAEPDGAFTWRLNAAYRVSDNVNTWVSYGRGRRPETLSISGRNVSEIDAETLDNVEAG
CCCCCCCCEEEEEEEEEEEECCCCHHHHHCCCCCCCCEEEECCCCCHHCCHHHHCCCCCC
MFGRFFDDRLQMTTSVYYGQYENFQTSRFDPINGVFIVENSGNATQYGLEFDGQALVTDN
HHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCEEECEEECCCEEEECC
IRLLGTYAYNFSEYDDEDSNGNPLQFAGNRFRMSPEQSFSLAADITLPFAEHGTFSLTPS
EEEEEEEEECCCCCCCCCCCCCEEEECCCEEECCCCCCCEEEEEEEEEECCCCCEEECHH
YIWKGQQYFEDDNGYDYAADGNGGFVRRRETYPDGTPVVEETGAYGLVNLRAGFDSADER
HHCCCHHEEECCCCEEEEECCCCCEEEEECCCCCCCCCEECCCCEEEEEEECCCCCCCCC
WGVYVLGENLLDEEYLIDVGNTGGAFGLHTIIRGKPQMLKAGAYVKF
CEEEEECCCCCCCEEEEEECCCCCCHHHHHHHCCCHHHEECCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1317381 [H]