Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
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Accession | NC_008358 |
Length | 3,705,021 |
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The map label for this gene is 114797251
Identifier: 114797251
GI number: 114797251
Start: 3410675
End: 3412318
Strand: Reverse
Name: 114797251
Synonym: HNE_3242
Alternate gene names: NA
Gene position: 3412318-3410675 (Counterclockwise)
Preceding gene: 114798634
Following gene: 114799785
Centisome position: 92.1
GC content: 66.0
Gene sequence:
>1644_bases GTGCGCCTGAGTGACCCGGCGCAGGCAAGGGATATGGGCGATGAGGCCCCCCGGCGCTGGCGCGATGTTTCGCCCGGCGC AGTGGCGGCGCGGGCAGAACGGGCGGCGGGCCTGCTGGCTGAAATTGAGGCAGCCGAAACCGTGCGGCAGGTGGATCAGG CGATCCTGGCGCGGCTGCTGACGGACGAGCTGGCGGAATATCATTATGATTCGGCGCGCATTCCCTTCACCGGGGATTGG GGCTTTCAGGCCGAGCCGGTGTTTGCCGCGATGCGCCTGCGGCTGCGCACGGCCGACGAGGCGGAAGCCTGGATTGCCCG GCTGAATGATGTGCCCCGCTATTTTGCGCAGAACCGGGAGAACATGACCCGCGGGATCGAGACCGGCTGGACGGCGCATA TCGATCCGCTCAACACGGTGCGTGAACAGATCGCGGCGCAGATCACCGATGATGTGGCCGCGAGCGAGCTGTACCGGCCG CTGGCCGACATGAGCGAAGCGATCGACCCGGAGTCCAGATCAAGACTTCAGGCTGAAGGGCTGGCCGCAGCGGCGCGGGC GATCGAGGCCTATCGCGAGACGCTTGCCTATATCGATGGGACGTATGCCCCCGCCGCGCGCGCTGGCGCCGGGATTGCCG GGCTGGAAGGGGGGCGAGAGGCCTATGCCGCGCTGATCGAGACCCATACGGCGGGCGCGGGCTACTCGGCTGAAGAGATC CACGCCCTCGGCCTGGAAGAGGTGGCGCGCATCCGGGCGGCGATGGAGGCGGTGATTGCCGAAACCGGGTTTGACGGCAG TTTTGCCGACTTCCTCGTTTTCCTGCGCACCGACCCGCAATTCTACGCCCGGAGCGAAGGGGAACTGATGGCGGCGGCGA CGGAGATTGCCGCGCGGCTCGACGCGATCCTGCCCCTCTATTTCAACCGGCTGCCGGAGCTGGGCTATACGGTGGACCCT GTGCCGGCTTCGATTGCGCCGGGGTATACGTCCGGGCGGTATATGTCCGGCGATCCGGCGGAGGGGCGCAAGGGGGCGTA TCTGGTCAATACCTATGCGCTCGATCAGCGGCCTTTATATGAGCTGCCCGCGCTCTCGGCGCATGAGGCGGTGCCGGGGC ACCATCTACAGATCGCGCTGGCGCAGGAGATGGCCGACCAGCCCTATTTCCGTCAGAACTATTATGCGACGGCCTTCGGC GAAGGCTGGGGCCTTTATGCCGAATGGCTCGCCAGTGAAGCCGGGCTGATGCAGACGCCGTATGAAGAGTTTGGCGCGCT GTCCATGGAGATGTGGCGGGCCTGCCGGCTGGTCTCCGATACCGGGCTGCACTGGTATGGCTGGAGCCGGGAAGAGGCCG AGACCTGCTTCAAGGAAAATACGGCGCTGGCCCCGCTCAACATCCAGACCGAAGTGACCCGCTATATCGGCTGGCCGGGG CAGGCGACGGCCTACAAGATCGGCGAGCTGAAAATCCGCGCGTTGCGGGCGGATGCCGAAAGCGCGCTGGGCGAGGCGTT CGACATTCGTGCGTTCCATGATGTGGTGCTGGGGCAGGGCGCGGTGCCGATGGATGTGCTTGAGATGCAGGTGAAGGCCT GGATCGCGACGCAATCTGTTGCGGATGCGCCAGCGGCGCCTTAG
Upstream 100 bases:
>100_bases ACCTGCAGTCTTTGCCCTTTTGCTGGGTTTGCTCGGCCCGGTTGCCCTCGCGGAGCCTGGAGACACGCTGGACGCGCTGA TCCCTGAATATGAGGCGCAT
Downstream 100 bases:
>100_bases GGCGCACAATTCTCCGGAAGCGTGCTTGCTCTTTGCGGCCTGCCTCTCCAAATGGGGCGGGTCATGTTTCGCTTCTTTGA ACGCCGTATCGATCCGTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 547; Mature: 547
Protein sequence:
>547_residues MRLSDPAQARDMGDEAPRRWRDVSPGAVAARAERAAGLLAEIEAAETVRQVDQAILARLLTDELAEYHYDSARIPFTGDW GFQAEPVFAAMRLRLRTADEAEAWIARLNDVPRYFAQNRENMTRGIETGWTAHIDPLNTVREQIAAQITDDVAASELYRP LADMSEAIDPESRSRLQAEGLAAAARAIEAYRETLAYIDGTYAPAARAGAGIAGLEGGREAYAALIETHTAGAGYSAEEI HALGLEEVARIRAAMEAVIAETGFDGSFADFLVFLRTDPQFYARSEGELMAAATEIAARLDAILPLYFNRLPELGYTVDP VPASIAPGYTSGRYMSGDPAEGRKGAYLVNTYALDQRPLYELPALSAHEAVPGHHLQIALAQEMADQPYFRQNYYATAFG EGWGLYAEWLASEAGLMQTPYEEFGALSMEMWRACRLVSDTGLHWYGWSREEAETCFKENTALAPLNIQTEVTRYIGWPG QATAYKIGELKIRALRADAESALGEAFDIRAFHDVVLGQGAVPMDVLEMQVKAWIATQSVADAPAAP
Sequences:
>Translated_547_residues MRLSDPAQARDMGDEAPRRWRDVSPGAVAARAERAAGLLAEIEAAETVRQVDQAILARLLTDELAEYHYDSARIPFTGDW GFQAEPVFAAMRLRLRTADEAEAWIARLNDVPRYFAQNRENMTRGIETGWTAHIDPLNTVREQIAAQITDDVAASELYRP LADMSEAIDPESRSRLQAEGLAAAARAIEAYRETLAYIDGTYAPAARAGAGIAGLEGGREAYAALIETHTAGAGYSAEEI HALGLEEVARIRAAMEAVIAETGFDGSFADFLVFLRTDPQFYARSEGELMAAATEIAARLDAILPLYFNRLPELGYTVDP VPASIAPGYTSGRYMSGDPAEGRKGAYLVNTYALDQRPLYELPALSAHEAVPGHHLQIALAQEMADQPYFRQNYYATAFG EGWGLYAEWLASEAGLMQTPYEEFGALSMEMWRACRLVSDTGLHWYGWSREEAETCFKENTALAPLNIQTEVTRYIGWPG QATAYKIGELKIRALRADAESALGEAFDIRAFHDVVLGQGAVPMDVLEMQVKAWIATQSVADAPAAP >Mature_547_residues MRLSDPAQARDMGDEAPRRWRDVSPGAVAARAERAAGLLAEIEAAETVRQVDQAILARLLTDELAEYHYDSARIPFTGDW GFQAEPVFAAMRLRLRTADEAEAWIARLNDVPRYFAQNRENMTRGIETGWTAHIDPLNTVREQIAAQITDDVAASELYRP LADMSEAIDPESRSRLQAEGLAAAARAIEAYRETLAYIDGTYAPAARAGAGIAGLEGGREAYAALIETHTAGAGYSAEEI HALGLEEVARIRAAMEAVIAETGFDGSFADFLVFLRTDPQFYARSEGELMAAATEIAARLDAILPLYFNRLPELGYTVDP VPASIAPGYTSGRYMSGDPAEGRKGAYLVNTYALDQRPLYELPALSAHEAVPGHHLQIALAQEMADQPYFRQNYYATAFG EGWGLYAEWLASEAGLMQTPYEEFGALSMEMWRACRLVSDTGLHWYGWSREEAETCFKENTALAPLNIQTEVTRYIGWPG QATAYKIGELKIRALRADAESALGEAFDIRAFHDVVLGQGAVPMDVLEMQVKAWIATQSVADAPAAP
Specific function: Unknown
COG id: COG4805
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59916; Mature: 59916
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLSDPAQARDMGDEAPRRWRDVSPGAVAARAERAAGLLAEIEAAETVRQVDQAILARLL CCCCCCHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TDELAEYHYDSARIPFTGDWGFQAEPVFAAMRLRLRTADEAEAWIARLNDVPRYFAQNRE HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHH NMTRGIETGWTAHIDPLNTVREQIAAQITDDVAASELYRPLADMSEAIDPESRSRLQAEG HHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LAAAARAIEAYRETLAYIDGTYAPAARAGAGIAGLEGGREAYAALIETHTAGAGYSAEEI HHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHH HALGLEEVARIRAAMEAVIAETGFDGSFADFLVFLRTDPQFYARSEGELMAAATEIAARL HHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHEEEEECCCHHHHCCCCCHHHHHHHHHHHH DAILPLYFNRLPELGYTVDPVPASIAPGYTSGRYMSGDPAEGRKGAYLVNTYALDQRPLY HHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCH ELPALSAHEAVPGHHLQIALAQEMADQPYFRQNYYATAFGEGWGLYAEWLASEAGLMQTP HCCCCCCCCCCCCCCEEEHHHHHHCCCCCHHHCCEEEEECCCCHHHHHHHHCCCCCCCCC YEEFGALSMEMWRACRLVSDTGLHWYGWSREEAETCFKENTALAPLNIQTEVTRYIGWPG HHHHCCHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCC QATAYKIGELKIRALRADAESALGEAFDIRAFHDVVLGQGAVPMDVLEMQVKAWIATQSV CCCEEEECCEEEEEECCCHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH ADAPAAP CCCCCCC >Mature Secondary Structure MRLSDPAQARDMGDEAPRRWRDVSPGAVAARAERAAGLLAEIEAAETVRQVDQAILARLL CCCCCCHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TDELAEYHYDSARIPFTGDWGFQAEPVFAAMRLRLRTADEAEAWIARLNDVPRYFAQNRE HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHH NMTRGIETGWTAHIDPLNTVREQIAAQITDDVAASELYRPLADMSEAIDPESRSRLQAEG HHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LAAAARAIEAYRETLAYIDGTYAPAARAGAGIAGLEGGREAYAALIETHTAGAGYSAEEI HHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHH HALGLEEVARIRAAMEAVIAETGFDGSFADFLVFLRTDPQFYARSEGELMAAATEIAARL HHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHEEEEECCCHHHHCCCCCHHHHHHHHHHHH DAILPLYFNRLPELGYTVDPVPASIAPGYTSGRYMSGDPAEGRKGAYLVNTYALDQRPLY HHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCH ELPALSAHEAVPGHHLQIALAQEMADQPYFRQNYYATAFGEGWGLYAEWLASEAGLMQTP HCCCCCCCCCCCCCCEEEHHHHHHCCCCCHHHCCEEEEECCCCHHHHHHHHCCCCCCCCC YEEFGALSMEMWRACRLVSDTGLHWYGWSREEAETCFKENTALAPLNIQTEVTRYIGWPG HHHHCCHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCC QATAYKIGELKIRALRADAESALGEAFDIRAFHDVVLGQGAVPMDVLEMQVKAWIATQSV CCCEEEECCEEEEEECCCHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH ADAPAAP CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA