| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114797241
Identifier: 114797241
GI number: 114797241
Start: 2456641
End: 2457585
Strand: Direct
Name: 114797241
Synonym: HNE_2356
Alternate gene names: NA
Gene position: 2456641-2457585 (Clockwise)
Preceding gene: 114799950
Following gene: 114797469
Centisome position: 66.31
GC content: 62.96
Gene sequence:
>945_bases ATGATCCTTACCCCTGACACACTTCTCTTCATTGCCGCCATGCTTGCCGCCGGCGCCCTTGCCGGCTTCGTGGCTGGCCT GTTCGGAATCGGCGGCGGCTTCGTCGTCGTGCCCGCGCTCGCTTCGGTTCTCACTTTGCTGAGCGCCGGAGGCGATGCGA TCGCCAGCGACAAAATCATGCACGTCGCCATCGGCACATCTCTCGCCACTATTATCTTCACCTCGCTCCGCTCGGTGCAG GCCCACGCAAAGCGCGGCGCAGTCGACTTTGAAATATTGAAAAGCTGGACGCCCTGGGTGGTGACGGGGGTCGTGCTTGG CCTCTTTGTTGCGCAGTATCTTGACGGTCACGCCCTGAAGCTCACCTTCGGTGTCGGCGTGTTCATCATGGCCTGGCATT TCCTGTTTCCGGTTCTCACGCACCGGGGTCCAGTCGCCAACGAGATGCCCAAAGGCTTCATGCGCGGCGGCCTCGGCAGC GTCCTGGGTGGTTATTGCACCCTGCTCGGTATTGGCGGGGGCACGCCCGCCGTCCTGATCATGACCCTCAGTGGGCAGCC GATGCACCGCGCTGTTGCCACAGCCGCCGGCTTTGGCACGATCATCGCCGTGCCCGGCACAATCGGCAGCATCATTGCCG GGCTTGGCCAAAGCGGCCTGCCCTTCGGGTCGCTTGGCTATGTCAACATCATCGCCGCAGTCGCCATCACGTCCATGAGC ATGATCACCGCCCCTTGGGGCGTTGCCGCCGCCCACAGCCTCAATGCGGTGCATCTGCGCCGCGCGCTTGGGCTCTACCT GCTCGTCACGTCCAGCATCATGCTGGTCTCGGCCCTCTCGCCGCCCTCACGCACTGCGCCGCTTCTGGCCGATCCCGTGC CCGCGGTAACCACCATCAATGCCGACATTTCACTTTCCAATCAGGAGGAAGATCATGGGATATAG
Upstream 100 bases:
>100_bases TATCGCCCGCTGAACCCGCGCACTGCGCAGGTGACACTCACCGCGAGGTTCTGATCATGCCGTTGAAGCACCTATGCCTA CCCAAGGGGATCACCGTCTC
Downstream 100 bases:
>100_bases ATTGACACGCCGCGGGCTGTTTTCAGCCGGCGCTGGCGTTGCCGCAGTTGGCCTCGCCGGCTGTACAACGACAACATCGG CTACCGCTGCAGCCGCCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 314; Mature: 314
Protein sequence:
>314_residues MILTPDTLLFIAAMLAAGALAGFVAGLFGIGGGFVVVPALASVLTLLSAGGDAIASDKIMHVAIGTSLATIIFTSLRSVQ AHAKRGAVDFEILKSWTPWVVTGVVLGLFVAQYLDGHALKLTFGVGVFIMAWHFLFPVLTHRGPVANEMPKGFMRGGLGS VLGGYCTLLGIGGGTPAVLIMTLSGQPMHRAVATAAGFGTIIAVPGTIGSIIAGLGQSGLPFGSLGYVNIIAAVAITSMS MITAPWGVAAAHSLNAVHLRRALGLYLLVTSSIMLVSALSPPSRTAPLLADPVPAVTTINADISLSNQEEDHGI
Sequences:
>Translated_314_residues MILTPDTLLFIAAMLAAGALAGFVAGLFGIGGGFVVVPALASVLTLLSAGGDAIASDKIMHVAIGTSLATIIFTSLRSVQ AHAKRGAVDFEILKSWTPWVVTGVVLGLFVAQYLDGHALKLTFGVGVFIMAWHFLFPVLTHRGPVANEMPKGFMRGGLGS VLGGYCTLLGIGGGTPAVLIMTLSGQPMHRAVATAAGFGTIIAVPGTIGSIIAGLGQSGLPFGSLGYVNIIAAVAITSMS MITAPWGVAAAHSLNAVHLRRALGLYLLVTSSIMLVSALSPPSRTAPLLADPVPAVTTINADISLSNQEEDHGI >Mature_314_residues MILTPDTLLFIAAMLAAGALAGFVAGLFGIGGGFVVVPALASVLTLLSAGGDAIASDKIMHVAIGTSLATIIFTSLRSVQ AHAKRGAVDFEILKSWTPWVVTGVVLGLFVAQYLDGHALKLTFGVGVFIMAWHFLFPVLTHRGPVANEMPKGFMRGGLGS VLGGYCTLLGIGGGTPAVLIMTLSGQPMHRAVATAAGFGTIIAVPGTIGSIIAGLGQSGLPFGSLGYVNIIAAVAITSMS MITAPWGVAAAHSLNAVHLRRALGLYLLVTSSIMLVSALSPPSRTAPLLADPVPAVTTINADISLSNQEEDHGI
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0721 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002781 [H]
Pfam domain/function: PF01925 DUF81 [H]
EC number: NA
Molecular weight: Translated: 31987; Mature: 31987
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILTPDTLLFIAAMLAAGALAGFVAGLFGIGGGFVVVPALASVLTLLSAGGDAIASDKIM CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEE HVAIGTSLATIIFTSLRSVQAHAKRGAVDFEILKSWTPWVVTGVVLGLFVAQYLDGHALK EEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEE LTFGVGVFIMAWHFLFPVLTHRGPVANEMPKGFMRGGLGSVLGGYCTLLGIGGGTPAVLI EEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEE MTLSGQPMHRAVATAAGFGTIIAVPGTIGSIIAGLGQSGLPFGSLGYVNIIAAVAITSMS EEECCCCHHHHHHHHCCCCEEEECCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH MITAPWGVAAAHSLNAVHLRRALGLYLLVTSSIMLVSALSPPSRTAPLLADPVPAVTTIN HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEE ADISLSNQEEDHGI CCEEECCCCCCCCC >Mature Secondary Structure MILTPDTLLFIAAMLAAGALAGFVAGLFGIGGGFVVVPALASVLTLLSAGGDAIASDKIM CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEE HVAIGTSLATIIFTSLRSVQAHAKRGAVDFEILKSWTPWVVTGVVLGLFVAQYLDGHALK EEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEE LTFGVGVFIMAWHFLFPVLTHRGPVANEMPKGFMRGGLGSVLGGYCTLLGIGGGTPAVLI EEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEE MTLSGQPMHRAVATAAGFGTIIAVPGTIGSIIAGLGQSGLPFGSLGYVNIIAAVAITSMS EEECCCCHHHHHHHHCCCCEEEECCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH MITAPWGVAAAHSLNAVHLRRALGLYLLVTSSIMLVSALSPPSRTAPLLADPVPAVTTIN HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEE ADISLSNQEEDHGI CCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]