Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
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Accession | NC_008358 |
Length | 3,705,021 |
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The map label for this gene is 114797231
Identifier: 114797231
GI number: 114797231
Start: 3385812
End: 3386441
Strand: Reverse
Name: 114797231
Synonym: HNE_3214
Alternate gene names: NA
Gene position: 3386441-3385812 (Counterclockwise)
Preceding gene: 114799548
Following gene: 114799936
Centisome position: 91.4
GC content: 60.79
Gene sequence:
>630_bases ATGACACGGCGGATCAGAAAAGCAGCGGTGGTCCTGGTGTGCATGAGCGCAGGGGCTGTTCTTCCGGCGGCAGCCGATTG CGATCTTTTCTCCTCGCTTGTGACACAGGCTGAAACCGGCCGCGGATTTGAAGAGATCGTCGCCTTCCGGTCTGTCTGGG ATCTGCGCGAAACCGGCGACACGGTGCCTGCGGAGCAGGCCTTTTCGGGGTTTGATGTCTGCTGGGTCGAAGACGACATC TGGAAGCCCGATCAAAGCGATTACGGCGCGCCCCGCTATGTCTGCCGGATTGCCGAGAAGCCAGATGCAGAGGGGACGCT GTCATTTGATAGCCATATCGCGCAGCTCCAGGCGATGGGTCGCCTCTCCCAGACGCTGGAAGCCTGCGTGACGGCGGATG AGCGGTTCAAGGCCGACCGGCAAACCAGCCGGGGCACCAGCTATATCATGAAGCCGGAGCTGACAGAGATGCGCGGTATG TACCAGAACCCGCGCGCCGAATTCAAACTCTCCCCTATGGAAGACGCCTACTCTATCACCGGCATGTCCGATGCTCTGCC CGCAGACATGCGCGTGCCGATGCAGCTTGACGTGATCATCGCCGGCCCGGCGAGAAATCTCCAGGAATAG
Upstream 100 bases:
>100_bases GAAGACTGGCGCGCCCGGCGCCGCCGCTGACACCCCATTTCAGGGGTGTGCGGGTACGGCCTTCCGGCTATAGGCTGCCC GCGTCAGCACAGGAGGCATC
Downstream 100 bases:
>100_bases GCTAGGGGCAAGGTGGCCATGGATTAATCGCGGGCGCGCAAAAGGCCGAGCAAAAAAGCGCGGGGAAGAGATCTCCCCGC GCTTTCTCAGTTAGGGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MTRRIRKAAVVLVCMSAGAVLPAAADCDLFSSLVTQAETGRGFEEIVAFRSVWDLRETGDTVPAEQAFSGFDVCWVEDDI WKPDQSDYGAPRYVCRIAEKPDAEGTLSFDSHIAQLQAMGRLSQTLEACVTADERFKADRQTSRGTSYIMKPELTEMRGM YQNPRAEFKLSPMEDAYSITGMSDALPADMRVPMQLDVIIAGPARNLQE
Sequences:
>Translated_209_residues MTRRIRKAAVVLVCMSAGAVLPAAADCDLFSSLVTQAETGRGFEEIVAFRSVWDLRETGDTVPAEQAFSGFDVCWVEDDI WKPDQSDYGAPRYVCRIAEKPDAEGTLSFDSHIAQLQAMGRLSQTLEACVTADERFKADRQTSRGTSYIMKPELTEMRGM YQNPRAEFKLSPMEDAYSITGMSDALPADMRVPMQLDVIIAGPARNLQE >Mature_208_residues TRRIRKAAVVLVCMSAGAVLPAAADCDLFSSLVTQAETGRGFEEIVAFRSVWDLRETGDTVPAEQAFSGFDVCWVEDDIW KPDQSDYGAPRYVCRIAEKPDAEGTLSFDSHIAQLQAMGRLSQTLEACVTADERFKADRQTSRGTSYIMKPELTEMRGMY QNPRAEFKLSPMEDAYSITGMSDALPADMRVPMQLDVIIAGPARNLQE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23158; Mature: 23027
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRRIRKAAVVLVCMSAGAVLPAAADCDLFSSLVTQAETGRGFEEIVAFRSVWDLRETGD CCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC TVPAEQAFSGFDVCWVEDDIWKPDQSDYGAPRYVCRIAEKPDAEGTLSFDSHIAQLQAMG CCCHHHHCCCCEEEEECCCCCCCCCCCCCCHHHEEEECCCCCCCCCCCHHHHHHHHHHHH RLSQTLEACVTADERFKADRQTSRGTSYIMKPELTEMRGMYQNPRAEFKLSPMEDAYSIT HHHHHHHHHHCCHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCCCCEEECCCCHHHEEC GMSDALPADMRVPMQLDVIIAGPARNLQE CCCCCCCCCCCCCEEEEEEEECCCCCCCC >Mature Secondary Structure TRRIRKAAVVLVCMSAGAVLPAAADCDLFSSLVTQAETGRGFEEIVAFRSVWDLRETGD CCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC TVPAEQAFSGFDVCWVEDDIWKPDQSDYGAPRYVCRIAEKPDAEGTLSFDSHIAQLQAMG CCCHHHHCCCCEEEEECCCCCCCCCCCCCCHHHEEEECCCCCCCCCCCHHHHHHHHHHHH RLSQTLEACVTADERFKADRQTSRGTSYIMKPELTEMRGMYQNPRAEFKLSPMEDAYSIT HHHHHHHHHHCCHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCCCCEEECCCCHHHEEC GMSDALPADMRVPMQLDVIIAGPARNLQE CCCCCCCCCCCCCEEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA