Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is 114797231

Identifier: 114797231

GI number: 114797231

Start: 3385812

End: 3386441

Strand: Reverse

Name: 114797231

Synonym: HNE_3214

Alternate gene names: NA

Gene position: 3386441-3385812 (Counterclockwise)

Preceding gene: 114799548

Following gene: 114799936

Centisome position: 91.4

GC content: 60.79

Gene sequence:

>630_bases
ATGACACGGCGGATCAGAAAAGCAGCGGTGGTCCTGGTGTGCATGAGCGCAGGGGCTGTTCTTCCGGCGGCAGCCGATTG
CGATCTTTTCTCCTCGCTTGTGACACAGGCTGAAACCGGCCGCGGATTTGAAGAGATCGTCGCCTTCCGGTCTGTCTGGG
ATCTGCGCGAAACCGGCGACACGGTGCCTGCGGAGCAGGCCTTTTCGGGGTTTGATGTCTGCTGGGTCGAAGACGACATC
TGGAAGCCCGATCAAAGCGATTACGGCGCGCCCCGCTATGTCTGCCGGATTGCCGAGAAGCCAGATGCAGAGGGGACGCT
GTCATTTGATAGCCATATCGCGCAGCTCCAGGCGATGGGTCGCCTCTCCCAGACGCTGGAAGCCTGCGTGACGGCGGATG
AGCGGTTCAAGGCCGACCGGCAAACCAGCCGGGGCACCAGCTATATCATGAAGCCGGAGCTGACAGAGATGCGCGGTATG
TACCAGAACCCGCGCGCCGAATTCAAACTCTCCCCTATGGAAGACGCCTACTCTATCACCGGCATGTCCGATGCTCTGCC
CGCAGACATGCGCGTGCCGATGCAGCTTGACGTGATCATCGCCGGCCCGGCGAGAAATCTCCAGGAATAG

Upstream 100 bases:

>100_bases
GAAGACTGGCGCGCCCGGCGCCGCCGCTGACACCCCATTTCAGGGGTGTGCGGGTACGGCCTTCCGGCTATAGGCTGCCC
GCGTCAGCACAGGAGGCATC

Downstream 100 bases:

>100_bases
GCTAGGGGCAAGGTGGCCATGGATTAATCGCGGGCGCGCAAAAGGCCGAGCAAAAAAGCGCGGGGAAGAGATCTCCCCGC
GCTTTCTCAGTTAGGGCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MTRRIRKAAVVLVCMSAGAVLPAAADCDLFSSLVTQAETGRGFEEIVAFRSVWDLRETGDTVPAEQAFSGFDVCWVEDDI
WKPDQSDYGAPRYVCRIAEKPDAEGTLSFDSHIAQLQAMGRLSQTLEACVTADERFKADRQTSRGTSYIMKPELTEMRGM
YQNPRAEFKLSPMEDAYSITGMSDALPADMRVPMQLDVIIAGPARNLQE

Sequences:

>Translated_209_residues
MTRRIRKAAVVLVCMSAGAVLPAAADCDLFSSLVTQAETGRGFEEIVAFRSVWDLRETGDTVPAEQAFSGFDVCWVEDDI
WKPDQSDYGAPRYVCRIAEKPDAEGTLSFDSHIAQLQAMGRLSQTLEACVTADERFKADRQTSRGTSYIMKPELTEMRGM
YQNPRAEFKLSPMEDAYSITGMSDALPADMRVPMQLDVIIAGPARNLQE
>Mature_208_residues
TRRIRKAAVVLVCMSAGAVLPAAADCDLFSSLVTQAETGRGFEEIVAFRSVWDLRETGDTVPAEQAFSGFDVCWVEDDIW
KPDQSDYGAPRYVCRIAEKPDAEGTLSFDSHIAQLQAMGRLSQTLEACVTADERFKADRQTSRGTSYIMKPELTEMRGMY
QNPRAEFKLSPMEDAYSITGMSDALPADMRVPMQLDVIIAGPARNLQE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23158; Mature: 23027

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRRIRKAAVVLVCMSAGAVLPAAADCDLFSSLVTQAETGRGFEEIVAFRSVWDLRETGD
CCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
TVPAEQAFSGFDVCWVEDDIWKPDQSDYGAPRYVCRIAEKPDAEGTLSFDSHIAQLQAMG
CCCHHHHCCCCEEEEECCCCCCCCCCCCCCHHHEEEECCCCCCCCCCCHHHHHHHHHHHH
RLSQTLEACVTADERFKADRQTSRGTSYIMKPELTEMRGMYQNPRAEFKLSPMEDAYSIT
HHHHHHHHHHCCHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCCCCEEECCCCHHHEEC
GMSDALPADMRVPMQLDVIIAGPARNLQE
CCCCCCCCCCCCCEEEEEEEECCCCCCCC
>Mature Secondary Structure 
TRRIRKAAVVLVCMSAGAVLPAAADCDLFSSLVTQAETGRGFEEIVAFRSVWDLRETGD
CCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
TVPAEQAFSGFDVCWVEDDIWKPDQSDYGAPRYVCRIAEKPDAEGTLSFDSHIAQLQAMG
CCCHHHHCCCCEEEEECCCCCCCCCCCCCCHHHEEEECCCCCCCCCCCHHHHHHHHHHHH
RLSQTLEACVTADERFKADRQTSRGTSYIMKPELTEMRGMYQNPRAEFKLSPMEDAYSIT
HHHHHHHHHHCCHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCCCCEEECCCCHHHEEC
GMSDALPADMRVPMQLDVIIAGPARNLQE
CCCCCCCCCCCCCEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA