Definition | Shewanella frigidimarina NCIMB 400, complete genome. |
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Accession | NC_008345 |
Length | 4,845,257 |
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The map label for this gene is rlmL
Identifier: 114563827
GI number:
Start: 3194985
End: 3197123
Strand: Reverse
Name: rlmL
Synonym: Sfri_2661
Alternate gene names: NA
Gene position: NA
Preceding gene: 114563828
Following gene: 114563826
Centisome position: NA
GC content: NA
Gene sequence:
>2139_bases ATGTTTAATTTTTTTGCTGCAGCCCCAAAGGGTTTCGAATATAGCCTTGCTTCTGAACTTAAAGAGTTCGGAGCAACCGA TGTTAAAGAAAGTGTTGCTGGAGTATATTTTTCTGCTTCATTAGAGCTGGCTTATCGCATTACATTATGGACTCGTTTAG CGAGCCGTATCGTATTAGTCATCTATAAAGGAGCTTGTGATTCTGCTGAGCAACTTTATAACGCAGCATACTGCATTGAT TGGCCATCGCATTTTTCCCATAAAAAAACCTTCAGTATTGATTTTCACGGCACGGGTGGTTTCATTAATAACACTCAATT TGGTGCGCTGAAAATTAAAGATGCTGTTGTTGACCGTTTTCGTGATGATGGTACTCCTCGTCCCGATGTAGAACGTGTCA ATCCAGATTTTAAAATTGATGCCCATTATCGTAATGGTCAACTGACTATTTCGATGAATTTCTCAGGCGCTTCTTTACAC CAACGTGGATACCGTTCAACTACGGGCGAAGCACCATTAAAAGAAAATCTCGCTGCCAATATGTTGGTACGCAGTGGTTG GCAAGCTAATCCTATTACTGTGCTTGACCCATTTTGCGGTAGTGGCACGGTACTAATAGAAGCGGCATTAATGGCTGCTG ATATTGCGCCTGGACTAAAACGTGAGAAATTTGGTTTCGAAAATTGGCAGAGTCACAATAAAGCAATGTGGCAGGTTATT TTTGACGAAGCTCAAGCGCGTGCAACATTGGGCAAAACGCGTTGTAAGCTTAAATTTTACGGTTCAGACATCGAACCTCA CCTGATTTCTATCGCTAAGCGTAATGCTGAGAATGCTGGTGTTGCTGAATTAATTGAATTTAGTGTGTCAGATGCGCTCG ATGTAACACCTCCTGTAAGTGAAGGCTTTTTGATTTCTAACCCGCCTTACGGTGAGCGTTTGGGTAATGTGACCGAGCTT TTACAACTTTATTACCAACTCGGTGATAAGTTTAAAAAAGAGTTTGGTGGCTGGAAAATAGCTATGTTGTGCAGTGATGT TGAACTTATATCATCGCTTAAACTAAAAGCTGATAAGCAGATGAAAATGTTCAACGGCGCATTAGAATGTGCTTTTAACA TTTATACCTTACACGCCAACAGTACCCGCCGCGACGTGCCTGAATTGCCTGAAGGTGTTGATATTATCGACATTGCGCCA GCATTTGCGAATCGTATTAAAAAGAATGTTAAACAGTTTGAGAAATGGGCTAAAAAAGAGCGCATAGACAGTTATCGTTT ATATGATGCTGATTTACCTGAATACAACGTCGCCATTGATAGATACGTCGATTATGTTGTTATTCAAGAATATTCAGCTC CAGCAACTATTCCTGAAGCGGTGACCAAACGCCGTATTAGTGATGTGCTATTAGCGTTGCCAGGTGCCTTAGGGATTCAT CCTGATCGTATCACCTTGAAAACTCGTGAACGTCAGAAGGGTGCTAACCAGTATCAAAAAATTGACGAACGTAAAGTAGA AGTTATCACTGAAGAATATGGTGCTAAATTTAAACTTAACTTAACCGGTTATCTCGATACTGGTTTGTTTCTCGATCACC GTGTTACACGTAAATTGGTTGGCGATAAAGCTAAAGGCAAAAATGTCCTCAATTTATTCGCTTACACGGGGTCTGCATCA GTCCATGCTGCGATTGGCGGAGCTAAATCAGTTACCACCATCGACATGTCTAATACCTACATCAATTGGGCCAAAGAAAA CTTTGCCTTAAATGGTTTGTCTGGTGCTAAATACGATTTTATTCAGGCAGACTGTTTGCAGTGGATAAAAGATAATAGTC ATCAAAAATATGAACTCATTTTTATCGACCCTCCGACGTTTTCAAATTCAAAACGTATGGAAGACAGTTGGGATGTGCAA CGCGACCATGCAGAGATGTTGGGCGGGTTAATTAAGTTGCTTTCTCCAAATGGCGAGCTTATTTTCTCAAATAACAAACG TAAATTTAAAATGGATATCGAAGCGTTGAACCAAGCTGGTATCGACGTGACTAATATCGACCATTTATGTTTACCGCTGG ATTATAAACGTAATCCACATATCCATAATGTGTGGCTACTGACACATGCAAAAAAATAG
Upstream 100 bases:
>100_bases AAGGGATTTTAACCGTCCATTTCGATAAGTCGTTGGGGTTATGTGTTTGAGCAGGTATAATGCTGCACTGAATTTTGCGT AACCGATGACTGACTAATAC
Downstream 100 bases:
>100_bases TTCAGTCGCTTATGTGCTATATCACACAGAGGGTTGCCATCTGTGTGATATAGCACAAGTATTGGTTGACCAAACCGCAA TAAATTATCAGCACATCGAT
Product: 23S rRNA m(2)G2445 methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>712_residues MFNFFAAAPKGFEYSLASELKEFGATDVKESVAGVYFSASLELAYRITLWTRLASRIVLVIYKGACDSAEQLYNAAYCID WPSHFSHKKTFSIDFHGTGGFINNTQFGALKIKDAVVDRFRDDGTPRPDVERVNPDFKIDAHYRNGQLTISMNFSGASLH QRGYRSTTGEAPLKENLAANMLVRSGWQANPITVLDPFCGSGTVLIEAALMAADIAPGLKREKFGFENWQSHNKAMWQVI FDEAQARATLGKTRCKLKFYGSDIEPHLISIAKRNAENAGVAELIEFSVSDALDVTPPVSEGFLISNPPYGERLGNVTEL LQLYYQLGDKFKKEFGGWKIAMLCSDVELISSLKLKADKQMKMFNGALECAFNIYTLHANSTRRDVPELPEGVDIIDIAP AFANRIKKNVKQFEKWAKKERIDSYRLYDADLPEYNVAIDRYVDYVVIQEYSAPATIPEAVTKRRISDVLLALPGALGIH PDRITLKTRERQKGANQYQKIDERKVEVITEEYGAKFKLNLTGYLDTGLFLDHRVTRKLVGDKAKGKNVLNLFAYTGSAS VHAAIGGAKSVTTIDMSNTYINWAKENFALNGLSGAKYDFIQADCLQWIKDNSHQKYELIFIDPPTFSNSKRMEDSWDVQ RDHAEMLGGLIKLLSPNGELIFSNNKRKFKMDIEALNQAGIDVTNIDHLCLPLDYKRNPHIHNVWLLTHAKK
Sequences:
NA
Specific function: NA
COG id: COG1092
COG function: function code R; Predicted SAM-dependent methyltransferases
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA