Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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Identifier: 114563771

GI number:

Start: 3115621

End: 3118884

Strand: Reverse

Name: Not Available

Synonym: Sfri_2605

Alternate gene names: NA

Gene position: NA

Preceding gene: 114563772

Following gene: 114563770

Centisome position: NA

GC content: NA

Gene sequence:

>3264_bases
ATGATGAATATATCTAAAGAGTCGATATTTCAAAGCGACATCCTAAGTCAAATGCAATCTCAAGGATGGTTATTGGGTGA
GTCGAGTAAATACAACAAACAGTTGGCCTTGTATCCTGAAGATGTAATTGATTTTGTTAAGGCTACACAGCCTGAACAAT
GGGATAAGCTGGCACAACACTTTCCAGATACTGAGCGTAATCCTACCGCTACAGCTGATGCATTACTTAAATCATTAGAA
CGTGATTTACAAAATAAAGGCACATTATGGGTATTGCGAAATCAGGTAAAAGACCGTGGGGCTAAATTTACCCTATGTAG
TTTTAAGCCTGATCATGACCTAAACCCTGATGCAAGTGCTCGTTATGACAAAAACATTCTCAAGGTTGTTCCTGAGCTGG
TTTATTCACCAAATGGCTACGACGGTCGATTAGATTTAACCTTATTCGTCAACGGTATTCCTGTGGCGACCTGTGAGCTT
AAATCAGAGTTTAAGCAGTCAATCACTAATGCCAAAGTTCAGTATATGAAGGACAGGCAACCTAAAGACCCTATAACTAA
AAAACCAGAACCATTATTAACCTTCAAACGTGGTGCATTAGTTCACTTTGCGGTAAGCCAATACAATGTAGCAATGACCA
CTCGTTTGGCAGGTAAAAAAACCTTCTTTTTACCGTTTGATCAAGGCACAGCTGAAGGTGGTCAGGGCAATGATATTCCT
GAAGATCCTAATGAATATGCAACTTCTTACCTTTGGAACGAGATTTTCCAAAAAGACAATCTGCTACTTATATTGAGCCG
TTATATTCACCTTGAAGTAAAAGATGAAGAGCATCTAGACGGTTCAATCAAGGTCAAAGAAACCCTTATTTTCCCTCGTT
ATCATCAATGGGCAGTGGTTTCTAAGCTGTTAAATACCGTCGATATTGAAGGGACGGGGCAGAAATACCTTATTCAACAC
AGTGCGGGTTCAGGTAAGTCTAATTCAATTGCTTGGCTAGCACATCAACTAGCTTCAAAGCATTACACTTCACCATCGAT
TGAAATCGATCATCCTGAGCTTGGTAAAAAAGTCGGTGATAAGGTGTTTGACTCAGTGATTGTCATTACTGACCGAACAG
TGCTTGATAGTCAGCTACAAGATACTATCTATCAGTTTGATCACAATGAAGGCATGATTGCTCGTGTTAATCGTGAAGAG
GCTCAAGGCTCTAAGTCCAGCCAATTAGCGGGAGAGTTAAAGGCCAGTACATCAATCATTATCGTCACCATACAGACCTT
TCCGCACGTATTAGAAGCAATCCGTAAAGACTCAACTCTTGCTGGTCGAAGCTTTGCTGTAATTGCCGATGAAGCGCATT
CTAGCCAAACTGGTACAACCGCACGAAAATTGCGTGAAGTCCTTATGACGGAGCAATTAGAAGGGGATGAAGAGTTAGAC
AGTGAAGATATGCTGCGGCTTTCTCTTGAAGCCCGTAAAGGCTCAAAAAATATCAGTTACTTTGCTTTTACTGCGACCCC
TAAAGCTAAAACTCTTGAGTTATTTGGTAGAAAACCTGACTTAGATGCACCTGCTAGTGATGGCAATAAACCATTACCAT
TTCACGTCTATTCTATGCGCCAAGCGATTGAAGAAGGCTTTATCCTCGATGTATTACAAAATTACACCAGTTACCGAGTT
GCCTATCAATTGGCACACGGTCAGCCCGAAAGTGATCATGAAGTTGACAGTAAAAAAGCATCTTCAAAAATGGCAAAATG
GGTCAGGCTACATCCATATAATATTGCTCAAAAAGTTGAAACTATTGTTGAACACTTCAATAGCAAAATTAAGCATCTGC
TCGGCGGCGAAGCAAAAGCAATGGTAGTCACTAGTAGTCGTTTAGAGGCGGTACGGTATAAATTGGCGTTTGAGAAGTAC
GTACATACTAAAGGCTACGAAAATATCAATGCGATGGTGGCGTTCTCTGGCGAGGTAAATGATCCTGACTACTCTCTGTT
ACAAGGGAATGATCAACCATTTACTGAAAACAATATGAACCCGAACCTGCGTGGGCGGGATATGCGTAAAGCGTTTGACA
CTAATGACTATCAAGTGATGCTAGTGGCAAATAAATTTCAGACGGGTTTTGATCAACCAAAGTTAGTCGCTATGTATGTC
GATAAGCCATTAAAAGGCGTGGAGTGTATCCAAACACTTTCTAGGTTAAATCGTACCTATAAAGGCAAAGATATGACCTT
CGTATTGGATTTTGTGAACGATCCTGAAGACGTACTGAAAGAGTTTAAAGTGTACTTTCAAACGGCTGAGTTGTCTGGGG
TATCTGATCCTAATATCGTCTACGAGATTATGGAAAAGCTAGCTGATGTTGGGATCTACCAATGGTTTGAGGTAGAAGCT
TTTGTGACCGCCTATAACAGCAAACAAGCTAATCAAGCAAAACTGGCTAATCTGTGCAAAGCACCGGTAGAGCGTTTTAG
TGTGCGCTACAAAGAAGCTAGCCATGTATTGCAAATAGCACAAGCGGACTTATCTAAAGCTAAATTAGATCGTAATGATA
AAGCAATTAAGTTTGCTGAGAACAGTGTTAAACACGCCAAAGAAGCTAGAGATGTTTTGGAGGTGTTTAAGAAGGATTTG
ATATCGTTCTATCGATACTATGAGTTTAGTTCTCAGATTGTTGATTTTAATGATTATGAGCTAGAAAAACTAAGCATCTT
TGCGAAACACTTACATCCCCTTTTACGCTTTGATGTAATTGATGATGATATTGACCTCAGTGATGTTGTGATGACTCATT
ATCGGTTACATGAGCAACGAGAAGCTGATTTGCATTTGGGTCATAAGATTGGTGAAGAGCCGCAGTCTTATTTAGCACCG
AGTAAAGAAGGGTCTGGAGCTACACCTAAAGACCCAAAAACTGAATTGTTAAACGAAATCATCGAGAGAATGAATGACTT
GTTCATTGAAGATGGTTTATCAGAAAACGATATGCTCAATTACGCTAATACCATAGCAGGAAAGATTTCTGAAAATGAAA
CGGTAATGGATCAGCTTCGCAGCAATACCAAAGAACAAGCAATGCTGGGAGAGTTCCCTAATTCAATCAACAATGCAGTT
ATTGAAAGTATGGACGTTCATAACGATATGGCAATGAAACTACTTTCTAATGAAGCTGTTGCGAAAGGCTTTGCAGGGCT
GATGTTTGATGTGTTGATGAAAGGGCTGGCTAAGTCTGTTAATGAAGCAGATTTGGGTGTATAG

Upstream 100 bases:

>100_bases
ATTAAAGCTATTGGTAGAAGAAGACAGTGCAGATAAATTTGCGAAAAATATTTTCAGTAAATTGAAACATAAGCTTGAAG
AGTTATCATAAGGATATGAA

Downstream 100 bases:

>100_bases
GGATAAATAATGAAGAAAGATGTCTTAACCCAAGAAGAACAAGCGCAACAGATTGAGGGGCTGAAATCATGCCCTTTATT
TCATGGGCCTAACCTTGATG

Product: type III restriction enzyme, res subunit

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1087_residues
MMNISKESIFQSDILSQMQSQGWLLGESSKYNKQLALYPEDVIDFVKATQPEQWDKLAQHFPDTERNPTATADALLKSLE
RDLQNKGTLWVLRNQVKDRGAKFTLCSFKPDHDLNPDASARYDKNILKVVPELVYSPNGYDGRLDLTLFVNGIPVATCEL
KSEFKQSITNAKVQYMKDRQPKDPITKKPEPLLTFKRGALVHFAVSQYNVAMTTRLAGKKTFFLPFDQGTAEGGQGNDIP
EDPNEYATSYLWNEIFQKDNLLLILSRYIHLEVKDEEHLDGSIKVKETLIFPRYHQWAVVSKLLNTVDIEGTGQKYLIQH
SAGSGKSNSIAWLAHQLASKHYTSPSIEIDHPELGKKVGDKVFDSVIVITDRTVLDSQLQDTIYQFDHNEGMIARVNREE
AQGSKSSQLAGELKASTSIIIVTIQTFPHVLEAIRKDSTLAGRSFAVIADEAHSSQTGTTARKLREVLMTEQLEGDEELD
SEDMLRLSLEARKGSKNISYFAFTATPKAKTLELFGRKPDLDAPASDGNKPLPFHVYSMRQAIEEGFILDVLQNYTSYRV
AYQLAHGQPESDHEVDSKKASSKMAKWVRLHPYNIAQKVETIVEHFNSKIKHLLGGEAKAMVVTSSRLEAVRYKLAFEKY
VHTKGYENINAMVAFSGEVNDPDYSLLQGNDQPFTENNMNPNLRGRDMRKAFDTNDYQVMLVANKFQTGFDQPKLVAMYV
DKPLKGVECIQTLSRLNRTYKGKDMTFVLDFVNDPEDVLKEFKVYFQTAELSGVSDPNIVYEIMEKLADVGIYQWFEVEA
FVTAYNSKQANQAKLANLCKAPVERFSVRYKEASHVLQIAQADLSKAKLDRNDKAIKFAENSVKHAKEARDVLEVFKKDL
ISFYRYYEFSSQIVDFNDYELEKLSIFAKHLHPLLRFDVIDDDIDLSDVVMTHYRLHEQREADLHLGHKIGEEPQSYLAP
SKEGSGATPKDPKTELLNEIIERMNDLFIEDGLSENDMLNYANTIAGKISENETVMDQLRSNTKEQAMLGEFPNSINNAV
IESMDVHNDMAMKLLSNEAVAKGFAGLMFDVLMKGLAKSVNEADLGV

Sequences:
NA

Specific function: NA

COG id: COG0610

COG function: function code V; Type I site-specific restriction-modification system, R (restriction) subunit and related helicases

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA